Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349189

Identifier: 29349189

GI number: 29349189

Start: 4906719

End: 4908164

Strand: Reverse

Name: 29349189

Synonym: BT_3781

Alternate gene names: NA

Gene position: 4908164-4906719 (Counterclockwise)

Preceding gene: 29349190

Following gene: 29349188

Centisome position: 78.4

GC content: 50.0

Gene sequence:

>1446_bases
ATGAATATAACCAAAACACTTTGCCTCTGCGCAGCACTTTCGGGCGCTGCCGGCGTGCAAGCAATGGAAAACCGCGAATT
TGTGACCCAGCAAGACAATACCCGGGTCAATAATTACCAGACCAACCGTCCCGAAGCCTCCAAGCGCTTATTCGTATCGC
AGGAAGTGGAACGACAGATTGACCACATCAAGCAACTACTGACCAATGCGAAACTGGCATGGATGTTCGAGAACTGTTTT
CCGAACACACTGGACACTACCGTTCACTTCGACGGAAAAGAGGACACTTTTGTATACACCGGAGACATCCACGCCATGTG
GCTCCGCGACTCCGGTGCGCAGGTATGGCCCTATGTGCAGCTTGCCAATAAAGACCCCGAACTGAAAAAGATGCTGGCAG
GAGTCATCAACCGCCAGTTTAAATGTATCAATATCGACCCGTACGCCAACGCCTTCAACATGAACTCCGAAGGAGGCGAA
TGGATGAGCGACCTGACGGACATGAAACCGGAACTTCACGAACGCAAATGGGAAATCGACTCTCTCTGCTACCCGATCCG
CCTGGCATACCATTACTGGAAAACAACGGGCGATGCCAGCGTATTCTCCGACGAATGGCTGCAGGCCATTGCAAATGTGC
TGAAGACTTTCAAGGAACAGCAGCGTAAGGACGACGCGAAAGGTCCGTACAGATTCCAGCGTAAGACCGAACGCGCACTC
GACACCATGACCAATGACGGTTGGGGCAATCCGGTGAAACCTGTCGGACTGATTGCTTCCGCTTTCCGCCCTTCGGATGA
CGCTACGACTTTCCAGTTCCTCGTTCCTTCCAACTTCTTTGCCGTTACTTCCTTGCGCAAAGCTGCCGAAATTCTGAACA
CCGTGAACAGGAAACCGGCGCTGGCCAAAGAATGTACCGCACTGGCGGATGAAGTAGAAAAAGCATTAAAGAAATATGCT
GTCTGCAACCATCCGAAATACGGTAAGATTTATGCTTTCGAGGTAGATGGCTTCGGCAATCAGCTACTGATGGACGACGC
CAACGTGCCGAGTCTCATCGCTTTGCCTTATCTGGGTGACGTCAAAGTGACTGATCCGATTTATCAGAATACCCGCAAGT
TTGTATGGAGCGAAGACAATCCTTACTTCTTCAAAGGCAGTGCCGGGGAAGGTATCGGAGGTCCGCATATCGGATATGAC
ATGATATGGCCCATGAGTATCATGATGAAAGCCTTCACCAGCCAGAATGACGCAGAAATCAAAACTTGCATCAAAATGCT
GATGGATACGGATGCAGGTACCGGCTTCATGCACGAATCATTCAACAAAAACGACCCGAAAAACTTTACCCGTGCATGGT
TTGCATGGCAGAATACGTTGTTCGGAGAGCTGATCCTCAAACTGGTCAATGAAGGCAAAGTGGACTTATTGAACAGCATT
CAGTAG

Upstream 100 bases:

>100_bases
ATGGCTGCTCGATAATGCCTGCCTGATCGAGCTGTTCGCTGAAATCGAGAAATAAAACATTGATTATTAACCCTTACATG
AATTAAAGAAAACAATTACC

Downstream 100 bases:

>100_bases
TCTCTACTCCATCTTTACTTATAAGATAACTGCTTCATACGGTGAAACCGATAGTTCCATGCTTTGGAACCAATCGTTTC
ACTGTATGAAACAAGAGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 481; Mature: 481

Protein sequence:

>481_residues
MNITKTLCLCAALSGAAGVQAMENREFVTQQDNTRVNNYQTNRPEASKRLFVSQEVERQIDHIKQLLTNAKLAWMFENCF
PNTLDTTVHFDGKEDTFVYTGDIHAMWLRDSGAQVWPYVQLANKDPELKKMLAGVINRQFKCINIDPYANAFNMNSEGGE
WMSDLTDMKPELHERKWEIDSLCYPIRLAYHYWKTTGDASVFSDEWLQAIANVLKTFKEQQRKDDAKGPYRFQRKTERAL
DTMTNDGWGNPVKPVGLIASAFRPSDDATTFQFLVPSNFFAVTSLRKAAEILNTVNRKPALAKECTALADEVEKALKKYA
VCNHPKYGKIYAFEVDGFGNQLLMDDANVPSLIALPYLGDVKVTDPIYQNTRKFVWSEDNPYFFKGSAGEGIGGPHIGYD
MIWPMSIMMKAFTSQNDAEIKTCIKMLMDTDAGTGFMHESFNKNDPKNFTRAWFAWQNTLFGELILKLVNEGKVDLLNSI
Q

Sequences:

>Translated_481_residues
MNITKTLCLCAALSGAAGVQAMENREFVTQQDNTRVNNYQTNRPEASKRLFVSQEVERQIDHIKQLLTNAKLAWMFENCF
PNTLDTTVHFDGKEDTFVYTGDIHAMWLRDSGAQVWPYVQLANKDPELKKMLAGVINRQFKCINIDPYANAFNMNSEGGE
WMSDLTDMKPELHERKWEIDSLCYPIRLAYHYWKTTGDASVFSDEWLQAIANVLKTFKEQQRKDDAKGPYRFQRKTERAL
DTMTNDGWGNPVKPVGLIASAFRPSDDATTFQFLVPSNFFAVTSLRKAAEILNTVNRKPALAKECTALADEVEKALKKYA
VCNHPKYGKIYAFEVDGFGNQLLMDDANVPSLIALPYLGDVKVTDPIYQNTRKFVWSEDNPYFFKGSAGEGIGGPHIGYD
MIWPMSIMMKAFTSQNDAEIKTCIKMLMDTDAGTGFMHESFNKNDPKNFTRAWFAWQNTLFGELILKLVNEGKVDLLNSI
Q
>Mature_481_residues
MNITKTLCLCAALSGAAGVQAMENREFVTQQDNTRVNNYQTNRPEASKRLFVSQEVERQIDHIKQLLTNAKLAWMFENCF
PNTLDTTVHFDGKEDTFVYTGDIHAMWLRDSGAQVWPYVQLANKDPELKKMLAGVINRQFKCINIDPYANAFNMNSEGGE
WMSDLTDMKPELHERKWEIDSLCYPIRLAYHYWKTTGDASVFSDEWLQAIANVLKTFKEQQRKDDAKGPYRFQRKTERAL
DTMTNDGWGNPVKPVGLIASAFRPSDDATTFQFLVPSNFFAVTSLRKAAEILNTVNRKPALAKECTALADEVEKALKKYA
VCNHPKYGKIYAFEVDGFGNQLLMDDANVPSLIALPYLGDVKVTDPIYQNTRKFVWSEDNPYFFKGSAGEGIGGPHIGYD
MIWPMSIMMKAFTSQNDAEIKTCIKMLMDTDAGTGFMHESFNKNDPKNFTRAWFAWQNTLFGELILKLVNEGKVDLLNSI
Q

Specific function: Unknown

COG id: COG3538

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54715; Mature: 54715

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNITKTLCLCAALSGAAGVQAMENREFVTQQDNTRVNNYQTNRPEASKRLFVSQEVERQI
CCHHHHHHHHHHHCCHHCCHHHCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHH
DHIKQLLTNAKLAWMFENCFPNTLDTTVHFDGKEDTFVYTGDIHAMWLRDSGAQVWPYVQ
HHHHHHHHCCHHEEHHHHCCCCCCCCEEEECCCCCCEEEECCEEEEEEECCCCCEEEEEE
LANKDPELKKMLAGVINRQFKCINIDPYANAFNMNSEGGEWMSDLTDMKPELHERKWEID
ECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCHHHHHHCCCHH
SLCYPIRLAYHYWKTTGDASVFSDEWLQAIANVLKTFKEQQRKDDAKGPYRFQRKTERAL
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
DTMTNDGWGNPVKPVGLIASAFRPSDDATTFQFLVPSNFFAVTSLRKAAEILNTVNRKPA
HHHCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCC
LAKECTALADEVEKALKKYAVCNHPKYGKIYAFEVDGFGNQLLMDDANVPSLIALPYLGD
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEECCCCCCCEEEECCCCC
VKVTDPIYQNTRKFVWSEDNPYFFKGSAGEGIGGPHIGYDMIWPMSIMMKAFTSQNDAEI
EEECCHHHHCCHHEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHH
KTCIKMLMDTDAGTGFMHESFNKNDPKNFTRAWFAWQNTLFGELILKLVNEGKVDLLNSI
HHHHHHHHCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCC
Q
C
>Mature Secondary Structure
MNITKTLCLCAALSGAAGVQAMENREFVTQQDNTRVNNYQTNRPEASKRLFVSQEVERQI
CCHHHHHHHHHHHCCHHCCHHHCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHH
DHIKQLLTNAKLAWMFENCFPNTLDTTVHFDGKEDTFVYTGDIHAMWLRDSGAQVWPYVQ
HHHHHHHHCCHHEEHHHHCCCCCCCCEEEECCCCCCEEEECCEEEEEEECCCCCEEEEEE
LANKDPELKKMLAGVINRQFKCINIDPYANAFNMNSEGGEWMSDLTDMKPELHERKWEID
ECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCHHHHHHCCCHH
SLCYPIRLAYHYWKTTGDASVFSDEWLQAIANVLKTFKEQQRKDDAKGPYRFQRKTERAL
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
DTMTNDGWGNPVKPVGLIASAFRPSDDATTFQFLVPSNFFAVTSLRKAAEILNTVNRKPA
HHHCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCC
LAKECTALADEVEKALKKYAVCNHPKYGKIYAFEVDGFGNQLLMDDANVPSLIALPYLGD
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEECCCCCCCEEEECCCCC
VKVTDPIYQNTRKFVWSEDNPYFFKGSAGEGIGGPHIGYDMIWPMSIMMKAFTSQNDAEI
EEECCHHHHCCHHEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHH
KTCIKMLMDTDAGTGFMHESFNKNDPKNFTRAWFAWQNTLFGELILKLVNEGKVDLLNSI
HHHHHHHHCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA