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The map label for this gene is omp85 [H]

Identifier: 29349133

GI number: 29349133

Start: 4833780

End: 4836437

Strand: Reverse

Name: omp85 [H]

Synonym: BT_3725

Alternate gene names: 29349133

Gene position: 4836437-4833780 (Counterclockwise)

Preceding gene: 29349134

Following gene: 29349132

Centisome position: 77.25

GC content: 42.85

Gene sequence:

>2658_bases
ATGCATTATCGTATTTCCTTTATATTCGTAACGTTTATCTGCCTGTTCTGCTTTGCAGCCACGGGCTTTACGCAGAATAC
CAACACTGACGAAGACTCTAAGCCAGTCATCTTATACTCAGGAACGCCTAAAAAGTATGAGATAGCAGACATCAAGGTTG
AAGGCGTGAAGAATTATGAAGACTATGTGTTAATCGGATTATCCGGACTGTCCGTTGGACAGACGATTACCGTGCCGGGT
GATGAGATTACCGGAGCAATCAAGCGCTACTGGAAACATGGTTTGTTCTCTAACGTACAGATTACTGCCGAAAAGATAGA
AGGCAACAAGATTTGGTTAAAAATCAGTCTGACACAACGTCCCCGTATTGCGGATGTACGCTATCATGGTGTGAAGAAGT
CAGAACGTACAGACTTTGAAAGCAAACTGGGTATGGTAAAAGGTATGCAGATCACTCCGAATACCGTTGACCGTGCAAAG
ACATTGATCAAACGTTATTTTGACGATAAAGGCTTTAAGAATGCAGAAGTGATTATCGCGCAAAAGGACGATCCATCTAA
CGAAAATCAGGTGATTGTTGACATTGATATCGACAAGAAGGAAAAGATTAAAGTGCACGCTATCCATATCACCGGAAACT
CGGCCATCAAAACATCCAAGCTGAAGAAAGTAATGAAGAAGACCAATGAAAAAGGCAAACTTCTGAATCTGTTCCGCACC
AAGAAATTTGTTCCGGAAAACTTTGAAGCAGATAAGCAGCTGATCATAGATAAGTATAACGAGCTGGGATATCGTGATGC
AATGATCGTAAAGGACAGTGTAGCACAATACGACGAAAAGACGGTAGATGTATATATGGATATAGACGAAGGTCAGAAAT
ATTACCTTCGTAATGTAACATGGGTAGGTAACACACTGTATCCTTCAGAACAGCTGAACTTCCTGCTCCGCATGAAGAAG
GGTGATGTTTACAACCAGAAGTTGCTGGGAGAACGTACCTCTACAGATGACGACGCAATCGGTAACTTATATTACAATAA
CGGTTATTTGTTCTACAATCTTGATCCGGTAGAAGTAAATATCGTCGGTGACTCCATCGACCTCGAAATGAGAATCTATG
AAGGCCGTCAGGCTACGATTAACAAGATCAACATCAGCGGTAACGACCGTCTGTATGAAAACGTAGTTCGTCGTGAGCTT
CGTATTCGTCCGGGACAGCTGTTCAGCAAGGATGACCTGATGCGTTCATTACGTGAAATCCAGCAGATGGGACACTTTGA
CCCTGAAAAACTGCAGCCGGATATTCAGCCGGACCCTGTAAACGGAACAGTTGATATAGGTCTGCCTTTGACATCTAAAG
CCAATGACCAGGTAGAATTCTCTGCCGGTTGGGGACAAACAGGTATCATCGGTAAGCTGAGTCTGAAATTTACCAACTTC
TCTGTTGCCAACTTGCTGCGTCCGGGTGAAAACTACCGTGGTATCCTGCCGCAAGGTGACGGACAGACATTGACCATCAG
CGGTCAGACGAATGCTAAATACTATCAGTCATATAGTATCTCATTCTTCGATCCTTGGTTTGGAGGTAAACGCCCGAACT
CACTTTCCGTATCGGCTTTCTTCTCAGTTCAGACTGACATCAGCAGCCGTTACTACAACTCGAGCTATTTCAACAACTAT
TACAATAGTATGTATAGCGGTTATGGTGGCTATGGTATGTACAACTATGGCAATTACAACAACTATGAGAACTACTATGA
CCCCGACAAGTCTATCAAGATGTGGGGACTTTCTCTAGGTTGGGGTAAGCGTCTGAAATGGCCGGATGACTACTTTACTT
TGTCTGCAGAGCTAGCTTACCAACGCTACAACCTGAAAGACTGGCAGTATTTCCCGGTAACCAACGGTAAATGTAATGAC
CTCAGCCTTTCACTGACTTTGGCACGTAACTCTATTGACAACCCGATCTTCCCACGTACAGGTTCGGACTTCTCGCTGTC
AGTTCAGCTTACTCCTCCGTACTCATTGTTTGATGGTAAAGACTATAAAGGTTATTTCTACGATCCAACAGATGATAGGG
GTATTACCCAAGATAATATGAATAAACTTCATAGATGGGTTGAATACCACAAATGGAAATTTAAAGCCAAAACATATACT
CCGTTGATGGATTATATCGCACATCCTAAGTGTCTGGTATTGATGACACGTACAGAATTTGGGTTGTTAGGGCACTATAA
CAAATATAAGAAATCGCCATTCGGTACATTCGACGTAGGTGGTGACGGTATGACTGGTTACTCAAGTTATGCAACAGAAA
GTATTGCATTGCGTGGTTATGAAAACAGTTCATTGACACCATATGGAAAAGAAGGGTATGCTTATGCACGCCTCGGCATC
GAATTAAGATATCCGTTGATGCTGGAAACAAGTACTAACATTTATGTGTTAGGTTTCTTGGAGGCTGGTAACGCATGGCA
TGATATCTCAAAATTCAATCCGTTTGATTTGAAACGTTCTGCCGGTATCGGTGTTCGTATCTTCTTGCCGATGATTGGTA
TGATGGGTATCGACTGGGGTTACGGTTTCGACAAGATAAATGGTAGTAAGGAATACGGCGGCAGCCAGTTCCACTTTATC
TTAGGACAAGAATTCTAA

Upstream 100 bases:

>100_bases
CTGTAAAGCCATTTATGAGTATCAGCAAAGAGAGCGCCGGTTCGGCAAAACGAGTGAACAAATCAGCTAACATAATTCGA
AACTTCAAATTATAACATAA

Downstream 100 bases:

>100_bases
TATAAAACTAAAAACTAAACGTCATGAGAAAGTCTGTTCTATCCATTATGTTACTGTTTGCCATCAGTATGGCAGCTAGT
GCACAAAAATTTGCATTGAT

Product: putative outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 885; Mature: 885

Protein sequence:

>885_residues
MHYRISFIFVTFICLFCFAATGFTQNTNTDEDSKPVILYSGTPKKYEIADIKVEGVKNYEDYVLIGLSGLSVGQTITVPG
DEITGAIKRYWKHGLFSNVQITAEKIEGNKIWLKISLTQRPRIADVRYHGVKKSERTDFESKLGMVKGMQITPNTVDRAK
TLIKRYFDDKGFKNAEVIIAQKDDPSNENQVIVDIDIDKKEKIKVHAIHITGNSAIKTSKLKKVMKKTNEKGKLLNLFRT
KKFVPENFEADKQLIIDKYNELGYRDAMIVKDSVAQYDEKTVDVYMDIDEGQKYYLRNVTWVGNTLYPSEQLNFLLRMKK
GDVYNQKLLGERTSTDDDAIGNLYYNNGYLFYNLDPVEVNIVGDSIDLEMRIYEGRQATINKINISGNDRLYENVVRREL
RIRPGQLFSKDDLMRSLREIQQMGHFDPEKLQPDIQPDPVNGTVDIGLPLTSKANDQVEFSAGWGQTGIIGKLSLKFTNF
SVANLLRPGENYRGILPQGDGQTLTISGQTNAKYYQSYSISFFDPWFGGKRPNSLSVSAFFSVQTDISSRYYNSSYFNNY
YNSMYSGYGGYGMYNYGNYNNYENYYDPDKSIKMWGLSLGWGKRLKWPDDYFTLSAELAYQRYNLKDWQYFPVTNGKCND
LSLSLTLARNSIDNPIFPRTGSDFSLSVQLTPPYSLFDGKDYKGYFYDPTDDRGITQDNMNKLHRWVEYHKWKFKAKTYT
PLMDYIAHPKCLVLMTRTEFGLLGHYNKYKKSPFGTFDVGGDGMTGYSSYATESIALRGYENSSLTPYGKEGYAYARLGI
ELRYPLMLETSTNIYVLGFLEAGNAWHDISKFNPFDLKRSAGIGVRIFLPMIGMMGIDWGYGFDKINGSKEYGGSQFHFI
LGQEF

Sequences:

>Translated_885_residues
MHYRISFIFVTFICLFCFAATGFTQNTNTDEDSKPVILYSGTPKKYEIADIKVEGVKNYEDYVLIGLSGLSVGQTITVPG
DEITGAIKRYWKHGLFSNVQITAEKIEGNKIWLKISLTQRPRIADVRYHGVKKSERTDFESKLGMVKGMQITPNTVDRAK
TLIKRYFDDKGFKNAEVIIAQKDDPSNENQVIVDIDIDKKEKIKVHAIHITGNSAIKTSKLKKVMKKTNEKGKLLNLFRT
KKFVPENFEADKQLIIDKYNELGYRDAMIVKDSVAQYDEKTVDVYMDIDEGQKYYLRNVTWVGNTLYPSEQLNFLLRMKK
GDVYNQKLLGERTSTDDDAIGNLYYNNGYLFYNLDPVEVNIVGDSIDLEMRIYEGRQATINKINISGNDRLYENVVRREL
RIRPGQLFSKDDLMRSLREIQQMGHFDPEKLQPDIQPDPVNGTVDIGLPLTSKANDQVEFSAGWGQTGIIGKLSLKFTNF
SVANLLRPGENYRGILPQGDGQTLTISGQTNAKYYQSYSISFFDPWFGGKRPNSLSVSAFFSVQTDISSRYYNSSYFNNY
YNSMYSGYGGYGMYNYGNYNNYENYYDPDKSIKMWGLSLGWGKRLKWPDDYFTLSAELAYQRYNLKDWQYFPVTNGKCND
LSLSLTLARNSIDNPIFPRTGSDFSLSVQLTPPYSLFDGKDYKGYFYDPTDDRGITQDNMNKLHRWVEYHKWKFKAKTYT
PLMDYIAHPKCLVLMTRTEFGLLGHYNKYKKSPFGTFDVGGDGMTGYSSYATESIALRGYENSSLTPYGKEGYAYARLGI
ELRYPLMLETSTNIYVLGFLEAGNAWHDISKFNPFDLKRSAGIGVRIFLPMIGMMGIDWGYGFDKINGSKEYGGSQFHFI
LGQEF
>Mature_885_residues
MHYRISFIFVTFICLFCFAATGFTQNTNTDEDSKPVILYSGTPKKYEIADIKVEGVKNYEDYVLIGLSGLSVGQTITVPG
DEITGAIKRYWKHGLFSNVQITAEKIEGNKIWLKISLTQRPRIADVRYHGVKKSERTDFESKLGMVKGMQITPNTVDRAK
TLIKRYFDDKGFKNAEVIIAQKDDPSNENQVIVDIDIDKKEKIKVHAIHITGNSAIKTSKLKKVMKKTNEKGKLLNLFRT
KKFVPENFEADKQLIIDKYNELGYRDAMIVKDSVAQYDEKTVDVYMDIDEGQKYYLRNVTWVGNTLYPSEQLNFLLRMKK
GDVYNQKLLGERTSTDDDAIGNLYYNNGYLFYNLDPVEVNIVGDSIDLEMRIYEGRQATINKINISGNDRLYENVVRREL
RIRPGQLFSKDDLMRSLREIQQMGHFDPEKLQPDIQPDPVNGTVDIGLPLTSKANDQVEFSAGWGQTGIIGKLSLKFTNF
SVANLLRPGENYRGILPQGDGQTLTISGQTNAKYYQSYSISFFDPWFGGKRPNSLSVSAFFSVQTDISSRYYNSSYFNNY
YNSMYSGYGGYGMYNYGNYNNYENYYDPDKSIKMWGLSLGWGKRLKWPDDYFTLSAELAYQRYNLKDWQYFPVTNGKCND
LSLSLTLARNSIDNPIFPRTGSDFSLSVQLTPPYSLFDGKDYKGYFYDPTDDRGITQDNMNKLHRWVEYHKWKFKAKTYT
PLMDYIAHPKCLVLMTRTEFGLLGHYNKYKKSPFGTFDVGGDGMTGYSSYATESIALRGYENSSLTPYGKEGYAYARLGI
ELRYPLMLETSTNIYVLGFLEAGNAWHDISKFNPFDLKRSAGIGVRIFLPMIGMMGIDWGYGFDKINGSKEYGGSQFHFI
LGQEF

Specific function: Unknown

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

Organism=Escherichia coli, GI1786374, Length=910, Percent_Identity=21.5384615384615, Blast_Score=99, Evalue=1e-21,

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 101408; Mature: 101408

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHYRISFIFVTFICLFCFAATGFTQNTNTDEDSKPVILYSGTPKKYEIADIKVEGVKNYE
CEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEEECCCCCC
DYVLIGLSGLSVGQTITVPGDEITGAIKRYWKHGLFSNVQITAEKIEGNKIWLKISLTQR
CEEEEEECCCCCCCEEEECCHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEEEECCC
PRIADVRYHGVKKSERTDFESKLGMVKGMQITPNTVDRAKTLIKRYFDDKGFKNAEVIIA
CCEEEEEECCCCCCCCCCHHHHHCCEECCEECCCHHHHHHHHHHHHHCCCCCCCEEEEEE
QKDDPSNENQVIVDIDIDKKEKIKVHAIHITGNSAIKTSKLKKVMKKTNEKGKLLNLFRT
ECCCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCEEHHHHHHHHHHCCCCCHHHHHHHH
KKFVPENFEADKQLIIDKYNELGYRDAMIVKDSVAQYDEKTVDVYMDIDEGQKYYLRNVT
HCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHCCCCEEEEEEECCCCCEEEEEEEE
WVGNTLYPSEQLNFLLRMKKGDVYNQKLLGERTSTDDDAIGNLYYNNGYLFYNLDPVEVN
EECCCCCCHHHCEEEEEECCCCCCCHHHCCCCCCCCCCCCCEEEEECCEEEEEECEEEEE
IVGDSIDLEMRIYEGRQATINKINISGNDRLYENVVRRELRIRPGQLFSKDDLMRSLREI
EECCCEEEEEEEECCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
QQMGHFDPEKLQPDIQPDPVNGTVDIGLPLTSKANDQVEFSAGWGQTGIIGKLSLKFTNF
HHHCCCCHHHCCCCCCCCCCCCEEEECCCCCCCCCCCEEEECCCCCCCEEEEEEEEEECE
SVANLLRPGENYRGILPQGDGQTLTISGQTNAKYYQSYSISFFDPWFGGKRPNSLSVSAF
EHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCEEEEEE
FSVQTDISSRYYNSSYFNNYYNSMYSGYGGYGMYNYGNYNNYENYYDPDKSIKMWGLSLG
EEEEECHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEC
WGKRLKWPDDYFTLSAELAYQRYNLKDWQYFPVTNGKCNDLSLSLTLARNSIDNPIFPRT
CCCCCCCCCCCEEEEEEHEEEECCCCCEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCC
GSDFSLSVQLTPPYSLFDGKDYKGYFYDPTDDRGITQDNMNKLHRWVEYHKWKFKAKTYT
CCCEEEEEEECCCCEECCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCC
PLMDYIAHPKCLVLMTRTEFGLLGHYNKYKKSPFGTFDVGGDGMTGYSSYATESIALRGY
HHHHHHCCCEEEEEEEECCCCCCCCCHHHCCCCCCEEECCCCCCCCCHHHCCCEEEEEEC
ENSSLTPYGKEGYAYARLGIELRYPLMLETSTNIYVLGFLEAGNAWHDISKFNPFDLKRS
CCCCCCCCCCCCEEEEEEEEEEECCEEEECCCCEEEEEEEECCCCCHHHCCCCCCCCHHC
AGIGVRIFLPMIGMMGIDWGYGFDKINGSKEYGGSQFHFILGQEF
CCCCEEEHHHHHHHHCCCCCCCCCCCCCCHHCCCCEEEEEEECCC
>Mature Secondary Structure
MHYRISFIFVTFICLFCFAATGFTQNTNTDEDSKPVILYSGTPKKYEIADIKVEGVKNYE
CEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEEECCCCCC
DYVLIGLSGLSVGQTITVPGDEITGAIKRYWKHGLFSNVQITAEKIEGNKIWLKISLTQR
CEEEEEECCCCCCCEEEECCHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEEEECCC
PRIADVRYHGVKKSERTDFESKLGMVKGMQITPNTVDRAKTLIKRYFDDKGFKNAEVIIA
CCEEEEEECCCCCCCCCCHHHHHCCEECCEECCCHHHHHHHHHHHHHCCCCCCCEEEEEE
QKDDPSNENQVIVDIDIDKKEKIKVHAIHITGNSAIKTSKLKKVMKKTNEKGKLLNLFRT
ECCCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCEEHHHHHHHHHHCCCCCHHHHHHHH
KKFVPENFEADKQLIIDKYNELGYRDAMIVKDSVAQYDEKTVDVYMDIDEGQKYYLRNVT
HCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHCCCCEEEEEEECCCCCEEEEEEEE
WVGNTLYPSEQLNFLLRMKKGDVYNQKLLGERTSTDDDAIGNLYYNNGYLFYNLDPVEVN
EECCCCCCHHHCEEEEEECCCCCCCHHHCCCCCCCCCCCCCEEEEECCEEEEEECEEEEE
IVGDSIDLEMRIYEGRQATINKINISGNDRLYENVVRRELRIRPGQLFSKDDLMRSLREI
EECCCEEEEEEEECCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
QQMGHFDPEKLQPDIQPDPVNGTVDIGLPLTSKANDQVEFSAGWGQTGIIGKLSLKFTNF
HHHCCCCHHHCCCCCCCCCCCCEEEECCCCCCCCCCCEEEECCCCCCCEEEEEEEEEECE
SVANLLRPGENYRGILPQGDGQTLTISGQTNAKYYQSYSISFFDPWFGGKRPNSLSVSAF
EHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCEEEEEE
FSVQTDISSRYYNSSYFNNYYNSMYSGYGGYGMYNYGNYNNYENYYDPDKSIKMWGLSLG
EEEEECHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEC
WGKRLKWPDDYFTLSAELAYQRYNLKDWQYFPVTNGKCNDLSLSLTLARNSIDNPIFPRT
CCCCCCCCCCCEEEEEEHEEEECCCCCEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCC
GSDFSLSVQLTPPYSLFDGKDYKGYFYDPTDDRGITQDNMNKLHRWVEYHKWKFKAKTYT
CCCEEEEEEECCCCEECCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCC
PLMDYIAHPKCLVLMTRTEFGLLGHYNKYKKSPFGTFDVGGDGMTGYSSYATESIALRGY
HHHHHHCCCEEEEEEEECCCCCCCCCHHHCCCCCCEEECCCCCCCCCHHHCCCEEEEEEC
ENSSLTPYGKEGYAYARLGIELRYPLMLETSTNIYVLGFLEAGNAWHDISKFNPFDLKRS
CCCCCCCCCCCCEEEEEEEEEEECCEEEECCCCEEEEEEEECCCCCHHHCCCCCCCCHHC
AGIGVRIFLPMIGMMGIDWGYGFDKINGSKEYGGSQFHFILGQEF
CCCCEEEHHHHHHHHCCCCCCCCCCCCCCHHCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]