| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is phoB [H]
Identifier: 29349116
GI number: 29349116
Start: 4818649
End: 4820052
Strand: Reverse
Name: phoB [H]
Synonym: BT_3708
Alternate gene names: 29349116
Gene position: 4820052-4818649 (Counterclockwise)
Preceding gene: 29349117
Following gene: 29349115
Centisome position: 76.99
GC content: 46.58
Gene sequence:
>1404_bases ATGAAAAAGTTGATTTACACACTGCTCTTTGTCCTTATTTCCGTTGCAGCCAACGGTCAGCAGGCAAAGTATGTATTCTA TTTCATCGGAGACGGAATGGGAGTCAATCAGGTAAATGGTACAGAGATGTATCAGGCAGAACTGCAAAACGGGCGCATCG GCGTTGAACCTTTATTGTTCACCCAATTTCCGGTAGCAACGATGGCAACCACTTTCTCCGCGACAAACTCTGTTACCGAC TCTGCCGCTGCGGGTACTGCACTGGCTACCGGAAAGAAGACCTACAACAGTGCCATCTCTGTAGGAGAAGACAAAAACCC GATTGAAACCGTAGCCGAAAAAGCCAAGAAGGCCGGAAAGAAAGTAGGTGTCACTACTTCCGTCAGCGTAGACCACGCCA CTCCTGCCGCTTTCTACGCTCATCAGGCAGACCGTAATATGAATTATGAAATCGCTGTCGACCTGACAAAAGCAAACTTT GACTTCTATGCAGGCGGTGGTTTTCTGAAACCGGACAAGACGTATGACAAGAAAGACGCTCCCAACATCTTCCCTATTTT CGAAGAAGCAGGTTACACCGTAGCACGTGGCTACAGCGATTATAAAGCCAAAAGCAAGGATGCCGGCAAAATGATCCTGA TACAGGAAGAAGGCAAAGATCCATCCTGCCTGCCTTATGCTATCGACCGTAAAAGCGACGACTTGACTCTCGCCCAAATC ACAGAAAGCGCAATCGACTTCCTGACCAAAGGCAAGAACAAAGGATTCTTCTTAATGGTAGAAGGTGGAAAGATTGACTG GGCTTGCCACGGTAATGACGCCGCTACCGTATTCAATGAAGTAAAGGACATGGATGACGCTATCAAAGTAGCTTACGAAT TCTACAAGAAACATCCGAAAGAAACACTGATCGTTGTTACGGCCGACCACGAAACCGGTGGTATCGTACTAGGTACAGGC AAATATGCGTTGAACCTGAAAGCATTGCAATATCAAAAACATTCTGCTGACGGATTGTCCAGACGTATCAGCGAACTAAG AAAATCAAAAGGCAACAAAGTGACTTGGGAAGACATGAAAGAATTCCTGGGTGAAGAAATGGGCTTCTGGAAACAGTTCC CTATTTCCTGGGAACAGGAAAAGAAGCTGCGTGACGAGTTCGAACAATCCTTTGTCAGAAATAAAGTGGTATTTGCCGAA AGCATGTACTCTAAAAGCGAGCCGATGGCTGCACGCGCTAAAGAAGTAATGGACCAGATATCTATGGTAGGCTGGGTAAG CGGCGGTCACTCTGCCGGTTATGTGCCGGTATTTGCTATCGGTGCCGGTTCTCAACTGTTCGGTGAGAAGATTGACAATA CGGAAATTCCGAAACGGATAGCTAAAGCTGCCGGATATAAATAA
Upstream 100 bases:
>100_bases TCATACAAATGACATAAAGAAACGGTGGATTTGCTTCGGCACTTCCACCGTTTTTTATTACCTTTGTCCATCACTAACCC TAATATTAAGATACAAAAGA
Downstream 100 bases:
>100_bases AGAATTGACTGCACGAATATGTAATCAAAACACTATTTATTTTCATTTAGGCACGGATTTCACGGATTAACACGGTTCTA TTCAATTAAAGACCGTGAAA
Product: alkaline phosphatase III
Products: NA
Alternate protein names: Alkaline phosphatase III; APase III [H]
Number of amino acids: Translated: 467; Mature: 467
Protein sequence:
>467_residues MKKLIYTLLFVLISVAANGQQAKYVFYFIGDGMGVNQVNGTEMYQAELQNGRIGVEPLLFTQFPVATMATTFSATNSVTD SAAAGTALATGKKTYNSAISVGEDKNPIETVAEKAKKAGKKVGVTTSVSVDHATPAAFYAHQADRNMNYEIAVDLTKANF DFYAGGGFLKPDKTYDKKDAPNIFPIFEEAGYTVARGYSDYKAKSKDAGKMILIQEEGKDPSCLPYAIDRKSDDLTLAQI TESAIDFLTKGKNKGFFLMVEGGKIDWACHGNDAATVFNEVKDMDDAIKVAYEFYKKHPKETLIVVTADHETGGIVLGTG KYALNLKALQYQKHSADGLSRRISELRKSKGNKVTWEDMKEFLGEEMGFWKQFPISWEQEKKLRDEFEQSFVRNKVVFAE SMYSKSEPMAARAKEVMDQISMVGWVSGGHSAGYVPVFAIGAGSQLFGEKIDNTEIPKRIAKAAGYK
Sequences:
>Translated_467_residues MKKLIYTLLFVLISVAANGQQAKYVFYFIGDGMGVNQVNGTEMYQAELQNGRIGVEPLLFTQFPVATMATTFSATNSVTD SAAAGTALATGKKTYNSAISVGEDKNPIETVAEKAKKAGKKVGVTTSVSVDHATPAAFYAHQADRNMNYEIAVDLTKANF DFYAGGGFLKPDKTYDKKDAPNIFPIFEEAGYTVARGYSDYKAKSKDAGKMILIQEEGKDPSCLPYAIDRKSDDLTLAQI TESAIDFLTKGKNKGFFLMVEGGKIDWACHGNDAATVFNEVKDMDDAIKVAYEFYKKHPKETLIVVTADHETGGIVLGTG KYALNLKALQYQKHSADGLSRRISELRKSKGNKVTWEDMKEFLGEEMGFWKQFPISWEQEKKLRDEFEQSFVRNKVVFAE SMYSKSEPMAARAKEVMDQISMVGWVSGGHSAGYVPVFAIGAGSQLFGEKIDNTEIPKRIAKAAGYK >Mature_467_residues MKKLIYTLLFVLISVAANGQQAKYVFYFIGDGMGVNQVNGTEMYQAELQNGRIGVEPLLFTQFPVATMATTFSATNSVTD SAAAGTALATGKKTYNSAISVGEDKNPIETVAEKAKKAGKKVGVTTSVSVDHATPAAFYAHQADRNMNYEIAVDLTKANF DFYAGGGFLKPDKTYDKKDAPNIFPIFEEAGYTVARGYSDYKAKSKDAGKMILIQEEGKDPSCLPYAIDRKSDDLTLAQI TESAIDFLTKGKNKGFFLMVEGGKIDWACHGNDAATVFNEVKDMDDAIKVAYEFYKKHPKETLIVVTADHETGGIVLGTG KYALNLKALQYQKHSADGLSRRISELRKSKGNKVTWEDMKEFLGEEMGFWKQFPISWEQEKKLRDEFEQSFVRNKVVFAE SMYSKSEPMAARAKEVMDQISMVGWVSGGHSAGYVPVFAIGAGSQLFGEKIDNTEIPKRIAKAAGYK
Specific function: Unknown
COG id: COG1785
COG function: function code P; Alkaline phosphatase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alkaline phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI157266292, Length=348, Percent_Identity=29.8850574712644, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI94721246, Length=346, Percent_Identity=30.0578034682081, Blast_Score=113, Evalue=4e-25, Organism=Homo sapiens, GI157266296, Length=350, Percent_Identity=31.1428571428571, Blast_Score=113, Evalue=5e-25, Organism=Homo sapiens, GI116734717, Length=354, Percent_Identity=27.9661016949153, Blast_Score=112, Evalue=6e-25, Organism=Homo sapiens, GI294660770, Length=333, Percent_Identity=27.6276276276276, Blast_Score=106, Evalue=5e-23, Organism=Escherichia coli, GI48994877, Length=344, Percent_Identity=28.1976744186047, Blast_Score=79, Evalue=8e-16, Organism=Saccharomyces cerevisiae, GI6320689, Length=472, Percent_Identity=27.3305084745763, Blast_Score=119, Evalue=7e-28, Organism=Drosophila melanogaster, GI24651554, Length=409, Percent_Identity=28.1173594132029, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI24651556, Length=396, Percent_Identity=27.5252525252525, Blast_Score=115, Evalue=7e-26, Organism=Drosophila melanogaster, GI18859923, Length=333, Percent_Identity=25.5255255255255, Blast_Score=114, Evalue=2e-25, Organism=Drosophila melanogaster, GI21355151, Length=492, Percent_Identity=27.0325203252033, Blast_Score=113, Evalue=3e-25, Organism=Drosophila melanogaster, GI21358067, Length=346, Percent_Identity=29.1907514450867, Blast_Score=113, Evalue=3e-25, Organism=Drosophila melanogaster, GI19921912, Length=348, Percent_Identity=29.0229885057471, Blast_Score=110, Evalue=3e-24, Organism=Drosophila melanogaster, GI24657835, Length=477, Percent_Identity=24.7379454926625, Blast_Score=108, Evalue=8e-24, Organism=Drosophila melanogaster, GI24657842, Length=372, Percent_Identity=26.6129032258064, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI21355981, Length=331, Percent_Identity=28.7009063444109, Blast_Score=103, Evalue=3e-22, Organism=Drosophila melanogaster, GI21355149, Length=343, Percent_Identity=25.9475218658892, Blast_Score=102, Evalue=5e-22, Organism=Drosophila melanogaster, GI24585213, Length=356, Percent_Identity=29.2134831460674, Blast_Score=102, Evalue=7e-22, Organism=Drosophila melanogaster, GI85725200, Length=345, Percent_Identity=26.0869565217391, Blast_Score=96, Evalue=4e-20, Organism=Drosophila melanogaster, GI85815833, Length=345, Percent_Identity=26.0869565217391, Blast_Score=96, Evalue=4e-20, Organism=Drosophila melanogaster, GI24657827, Length=335, Percent_Identity=28.0597014925373, Blast_Score=92, Evalue=6e-19,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR001952 - InterPro: IPR018299 - InterPro: IPR017850 [H]
Pfam domain/function: PF00245 Alk_phosphatase [H]
EC number: =3.1.3.1 [H]
Molecular weight: Translated: 51400; Mature: 51400
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: PS00123 ALKALINE_PHOSPHATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLIYTLLFVLISVAANGQQAKYVFYFIGDGMGVNQVNGTEMYQAELQNGRIGVEPLLF CHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCEEEE TQFPVATMATTFSATNSVTDSAAAGTALATGKKTYNSAISVGEDKNPIETVAEKAKKAGK ECCCHHHHHHHHHCCCCCCCHHHCCCHHHCCCHHHHHHEECCCCCCHHHHHHHHHHHCCC KVGVTTSVSVDHATPAAFYAHQADRNMNYEIAVDLTKANFDFYAGGGFLKPDKTYDKKDA CCCCEEEEEECCCCCHHHHHHHHCCCCCEEEEEEEEECCCEEEECCCCCCCCCCCCCCCC PNIFPIFEEAGYTVARGYSDYKAKSKDAGKMILIQEEGKDPSCLPYAIDRKSDDLTLAQI CCEEEEHHHCCCEEECCCHHHCCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCCHHHHH TESAIDFLTKGKNKGFFLMVEGGKIDWACHGNDAATVFNEVKDMDDAIKVAYEFYKKHPK HHHHHHHHHCCCCCCEEEEEECCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCC ETLIVVTADHETGGIVLGTGKYALNLKALQYQKHSADGLSRRISELRKSKGNKVTWEDMK CEEEEEEECCCCCCEEEECCCEEEEEEHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHH EFLGEEMGFWKQFPISWEQEKKLRDEFEQSFVRNKVVFAESMYSKSEPMAARAKEVMDQI HHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH SMVGWVSGGHSAGYVPVFAIGAGSQLFGEKIDNTEIPKRIAKAAGYK HHHEEECCCCCCCCEEEEEECCCCHHHHCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure MKKLIYTLLFVLISVAANGQQAKYVFYFIGDGMGVNQVNGTEMYQAELQNGRIGVEPLLF CHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCEEEE TQFPVATMATTFSATNSVTDSAAAGTALATGKKTYNSAISVGEDKNPIETVAEKAKKAGK ECCCHHHHHHHHHCCCCCCCHHHCCCHHHCCCHHHHHHEECCCCCCHHHHHHHHHHHCCC KVGVTTSVSVDHATPAAFYAHQADRNMNYEIAVDLTKANFDFYAGGGFLKPDKTYDKKDA CCCCEEEEEECCCCCHHHHHHHHCCCCCEEEEEEEEECCCEEEECCCCCCCCCCCCCCCC PNIFPIFEEAGYTVARGYSDYKAKSKDAGKMILIQEEGKDPSCLPYAIDRKSDDLTLAQI CCEEEEHHHCCCEEECCCHHHCCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCCHHHHH TESAIDFLTKGKNKGFFLMVEGGKIDWACHGNDAATVFNEVKDMDDAIKVAYEFYKKHPK HHHHHHHHHCCCCCCEEEEEECCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCC ETLIVVTADHETGGIVLGTGKYALNLKALQYQKHSADGLSRRISELRKSKGNKVTWEDMK CEEEEEEECCCCCCEEEECCCEEEEEEHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHH EFLGEEMGFWKQFPISWEQEKKLRDEFEQSFVRNKVVFAESMYSKSEPMAARAKEVMDQI HHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH SMVGWVSGGHSAGYVPVFAIGAGSQLFGEKIDNTEIPKRIAKAAGYK HHHEEECCCCCCCCEEEEEECCCCHHHHCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1898729; 9202461; 9384377; 2113910; 2105301 [H]