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The map label for this gene is susA [C]

Identifier: 29349112

GI number: 29349112

Start: 4812998

End: 4814851

Strand: Reverse

Name: susA [C]

Synonym: BT_3704

Alternate gene names: 29349112

Gene position: 4814851-4812998 (Counterclockwise)

Preceding gene: 29349114

Following gene: 29349111

Centisome position: 76.91

GC content: 45.58

Gene sequence:

>1854_bases
ATGAAAAGGAATTTATTATTCATTATCTTACTATTATTATTACCCGGTCTTCACCAGGTATTCGCAACAAGCACTATAAA
GAAAGTAGCCCCGACCTTTTGGTGGGCAGGAATGAAGAATCCCGAATTGCAGATACTATTATATGGTGACCGCATATCAT
CCGCAGACGTCAGTCTTTCTGCCGATAATATCACGCTGCAAGAAGTGGTGAAGCAGGAGAATCCTAATTATCTGGTTCTG
TATTTAGACCTTTCGAAGGCTGCTCCACAGAACTTTGACATCATCCTGAAACAAGGCAAAAAGCAGACAAAAATCCCTTA
CGAGCTTAAACAGCGCCGGCCGAATGCTTCGGCAGTAGAAGGTTTTGATTCGAGCGACGTGCTTTATCTTATTATGCCGG
ACCGTTTTGCCAATGGCAACCCCTCCAACGACATCATTCCCGGAATGCTGGAAGGAAATGTAGACCGTAATGAGCCTTTC
GCACGTCATGGCGGTGATTTGAAAGGAATAGAGAATCATCTGGATTACATAGCAGACCTCGGAGTCACCAGTATATGGCT
CAACCCGATTCAGGAAAATGACATGAAAGAAGGATCGTATCACGGTTATGCCATTACCGATTATTATCAGGTAGACCGCC
GCTTCGGCAGTAACGAAGAGTTCCGCAAACTTACTCAGGAAGCTAATGCCAAAGGGCTGAAAGTCGTAATGGACATGATC
TTCAACCATTGCGGTTCGGACAACTATCTGTTTAAAGATATGCCCTCCAAAGACTGGTTTAACTTTGAAGGCAACTACGT
GCAGACCAGCTTCAAGACTGCCACTCAAATGGACCCGTATGCTTCCGATTACGAAAAGAAAATCGCTATCGACGGTTGGT
TCACACTGACCATGCCGGACTTCAACCAAAGAAACCGTCATGTAGCTACTTATCTGATACAGAGCAGTATCTGGTGGATT
GAATACGCCGGTATCAACGGCATCCGTCAGGATACACACCCTTATGCCGACTTCGATATGATGGCACGCTGGTGCAAAGC
GGTCAATGAAGAATATCCCAAGTTCAACATTGTAGGTGAAACATGGCTGGGCAACAATGTACTCATCTCCTACTGGCAGA
AAGACAGCAGACTCGCTTATCCGAAGAACAGCAATCTCCCGACTGTCATGGACTTCCCGCTAATGGAAGAGATGAACAAG
GCTTTCGACGAAGAGACTACCGAATGGAACGGAGGACTTTTCAGACTCTACGAATATCTATCACAGGACATCGTCTACAG
CCATCCAATGAGCCTGCTGACCTTCCTCGACAATCACGATACTTCCCGCTTCTACCGTTCGGAAGCAGATACAAAGAATC
TGGACCGATACAAGCAAGCCCTGACGTTCTTACTGACAACCCGCGGAATACCGCAGATATATTATGGAACTGAAATCCTG
ATGGCAGCCGACAAGGCGAATGGAGACGGCCTGCTCCGCTGCGACTTCCCCGGAGGCTGGCCGAACGATACAAAAAACTG
CTTTGACGCAGCCAACCGCACTCCACAGCAAAATGAAGCATTCTCCTTTATGCAAAAACTGCTCCAATGGAGAAAAGGAA
ACGAAGTCATTGCCAAAGGTCAGCTCAAACATTTCGCACCGAATAAAGGTGTCTACGTTTACGAACGCAAATACGGTGAT
AAATCAGTCGTTGTTTTCCTGAATGGAAACGACCGGGAACAGACCATTGACCTGGTTCCTTACCAAGAAATACTTCCTGC
CTCATCTGCTTTCGATTTATTGACAGAGAAAAAGGTTGAATTAAGAAATGAATTAACACTTCCAAGTCGTGAAATATACC
TTTTATCCTTTTAA

Upstream 100 bases:

>100_bases
CAAGCATTTATATTTTCTTTCTAACTGCCATACGGCATACCCGATTCACCTACATTTGCATCATCGGTTCCCCCGAACAA
ATTTTAAAAATCTAGTTACC

Downstream 100 bases:

>100_bases
TAAGTTCACTTCAACTTATATTTATCAGAATACAGAAAAGAAATAAACTACTGTAAAACAAAACATTAACATTAATACAA
ACTTGTATTTTTATTCTAGA

Product: alpha-amylase SusA

Products: NA

Alternate protein names: CDase; Cyclomaltodextrin hydrolase, decycling [H]

Number of amino acids: Translated: 617; Mature: 617

Protein sequence:

>617_residues
MKRNLLFIILLLLLPGLHQVFATSTIKKVAPTFWWAGMKNPELQILLYGDRISSADVSLSADNITLQEVVKQENPNYLVL
YLDLSKAAPQNFDIILKQGKKQTKIPYELKQRRPNASAVEGFDSSDVLYLIMPDRFANGNPSNDIIPGMLEGNVDRNEPF
ARHGGDLKGIENHLDYIADLGVTSIWLNPIQENDMKEGSYHGYAITDYYQVDRRFGSNEEFRKLTQEANAKGLKVVMDMI
FNHCGSDNYLFKDMPSKDWFNFEGNYVQTSFKTATQMDPYASDYEKKIAIDGWFTLTMPDFNQRNRHVATYLIQSSIWWI
EYAGINGIRQDTHPYADFDMMARWCKAVNEEYPKFNIVGETWLGNNVLISYWQKDSRLAYPKNSNLPTVMDFPLMEEMNK
AFDEETTEWNGGLFRLYEYLSQDIVYSHPMSLLTFLDNHDTSRFYRSEADTKNLDRYKQALTFLLTTRGIPQIYYGTEIL
MAADKANGDGLLRCDFPGGWPNDTKNCFDAANRTPQQNEAFSFMQKLLQWRKGNEVIAKGQLKHFAPNKGVYVYERKYGD
KSVVVFLNGNDREQTIDLVPYQEILPASSAFDLLTEKKVELRNELTLPSREIYLLSF

Sequences:

>Translated_617_residues
MKRNLLFIILLLLLPGLHQVFATSTIKKVAPTFWWAGMKNPELQILLYGDRISSADVSLSADNITLQEVVKQENPNYLVL
YLDLSKAAPQNFDIILKQGKKQTKIPYELKQRRPNASAVEGFDSSDVLYLIMPDRFANGNPSNDIIPGMLEGNVDRNEPF
ARHGGDLKGIENHLDYIADLGVTSIWLNPIQENDMKEGSYHGYAITDYYQVDRRFGSNEEFRKLTQEANAKGLKVVMDMI
FNHCGSDNYLFKDMPSKDWFNFEGNYVQTSFKTATQMDPYASDYEKKIAIDGWFTLTMPDFNQRNRHVATYLIQSSIWWI
EYAGINGIRQDTHPYADFDMMARWCKAVNEEYPKFNIVGETWLGNNVLISYWQKDSRLAYPKNSNLPTVMDFPLMEEMNK
AFDEETTEWNGGLFRLYEYLSQDIVYSHPMSLLTFLDNHDTSRFYRSEADTKNLDRYKQALTFLLTTRGIPQIYYGTEIL
MAADKANGDGLLRCDFPGGWPNDTKNCFDAANRTPQQNEAFSFMQKLLQWRKGNEVIAKGQLKHFAPNKGVYVYERKYGD
KSVVVFLNGNDREQTIDLVPYQEILPASSAFDLLTEKKVELRNELTLPSREIYLLSF
>Mature_617_residues
MKRNLLFIILLLLLPGLHQVFATSTIKKVAPTFWWAGMKNPELQILLYGDRISSADVSLSADNITLQEVVKQENPNYLVL
YLDLSKAAPQNFDIILKQGKKQTKIPYELKQRRPNASAVEGFDSSDVLYLIMPDRFANGNPSNDIIPGMLEGNVDRNEPF
ARHGGDLKGIENHLDYIADLGVTSIWLNPIQENDMKEGSYHGYAITDYYQVDRRFGSNEEFRKLTQEANAKGLKVVMDMI
FNHCGSDNYLFKDMPSKDWFNFEGNYVQTSFKTATQMDPYASDYEKKIAIDGWFTLTMPDFNQRNRHVATYLIQSSIWWI
EYAGINGIRQDTHPYADFDMMARWCKAVNEEYPKFNIVGETWLGNNVLISYWQKDSRLAYPKNSNLPTVMDFPLMEEMNK
AFDEETTEWNGGLFRLYEYLSQDIVYSHPMSLLTFLDNHDTSRFYRSEADTKNLDRYKQALTFLLTTRGIPQIYYGTEIL
MAADKANGDGLLRCDFPGGWPNDTKNCFDAANRTPQQNEAFSFMQKLLQWRKGNEVIAKGQLKHFAPNKGVYVYERKYGD
KSVVVFLNGNDREQTIDLVPYQEILPASSAFDLLTEKKVELRNELTLPSREIYLLSF

Specific function: Hydrolyzes cyclodextrins. Can also act on linear maltodextrins, with the exception of maltose [H]

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Escherichia coli, GI1786604, Length=531, Percent_Identity=23.5404896421846, Blast_Score=103, Evalue=4e-23,
Organism=Escherichia coli, GI1789995, Length=173, Percent_Identity=30.0578034682081, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1790687, Length=181, Percent_Identity=25.9668508287293, Blast_Score=77, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6322245, Length=189, Percent_Identity=30.1587301587302, Blast_Score=87, Evalue=7e-18,
Organism=Saccharomyces cerevisiae, GI6321726, Length=184, Percent_Identity=27.7173913043478, Blast_Score=80, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6322241, Length=189, Percent_Identity=27.5132275132275, Blast_Score=79, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6322021, Length=189, Percent_Identity=27.5132275132275, Blast_Score=79, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6324416, Length=189, Percent_Identity=27.5132275132275, Blast_Score=79, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6319776, Length=189, Percent_Identity=28.042328042328, Blast_Score=77, Evalue=8e-15,
Organism=Saccharomyces cerevisiae, GI6321731, Length=189, Percent_Identity=28.042328042328, Blast_Score=77, Evalue=8e-15,
Organism=Drosophila melanogaster, GI24583747, Length=511, Percent_Identity=22.3091976516634, Blast_Score=87, Evalue=5e-17,
Organism=Drosophila melanogaster, GI24583749, Length=511, Percent_Identity=22.3091976516634, Blast_Score=86, Evalue=7e-17,
Organism=Drosophila melanogaster, GI221330053, Length=190, Percent_Identity=26.8421052631579, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24583745, Length=516, Percent_Identity=22.2868217054264, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI45549022, Length=189, Percent_Identity=26.984126984127, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24586599, Length=186, Percent_Identity=29.0322580645161, Blast_Score=77, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24586587, Length=187, Percent_Identity=28.3422459893048, Blast_Score=77, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24586597, Length=187, Percent_Identity=28.3422459893048, Blast_Score=76, Evalue=8e-14,
Organism=Drosophila melanogaster, GI24586591, Length=186, Percent_Identity=26.3440860215054, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004185
- InterPro:   IPR006589
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02903 Alpha-amylase_N [H]

EC number: =3.2.1.54 [H]

Molecular weight: Translated: 71184; Mature: 71184

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRNLLFIILLLLLPGLHQVFATSTIKKVAPTFWWAGMKNPELQILLYGDRISSADVSLS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEE
ADNITLQEVVKQENPNYLVLYLDLSKAAPQNFDIILKQGKKQTKIPYELKQRRPNASAVE
CCCEEHHHHHHCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCHHHHHCCCCCHHHC
GFDSSDVLYLIMPDRFANGNPSNDIIPGMLEGNVDRNEPFARHGGDLKGIENHLDYIADL
CCCCCCEEEEEECCCCCCCCCCCCCCCCHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHHC
GVTSIWLNPIQENDMKEGSYHGYAITDYYQVDRRFGSNEEFRKLTQEANAKGLKVVMDMI
CCCEEEECCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHH
FNHCGSDNYLFKDMPSKDWFNFEGNYVQTSFKTATQMDPYASDYEKKIAIDGWFTLTMPD
HHHCCCCCEEECCCCCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCEEEEEEEEEEECCC
FNQRNRHVATYLIQSSIWWIEYAGINGIRQDTHPYADFDMMARWCKAVNEEYPKFNIVGE
CCCCCCCEEEHEECCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEC
TWLGNNVLISYWQKDSRLAYPKNSNLPTVMDFPLMEEMNKAFDEETTEWNGGLFRLYEYL
EECCCCEEEEEECCCCEEECCCCCCCCEEECCHHHHHHHHHHCCCCCCCCCCHHHHHHHH
SQDIVYSHPMSLLTFLDNHDTSRFYRSEADTKNLDRYKQALTFLLTTRGIPQIYYGTEIL
HHHHHHHCHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCEEE
MAADKANGDGLLRCDFPGGWPNDTKNCFDAANRTPQQNEAFSFMQKLLQWRKGNEVIAKG
EEECCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEECC
QLKHFAPNKGVYVYERKYGDKSVVVFLNGNDREQTIDLVPYQEILPASSAFDLLTEKKVE
CHHHCCCCCCEEEEEEECCCCEEEEEECCCCCCEEEEECCHHHHCCCCHHHHHHHHHHHH
LRNELTLPSREIYLLSF
HHHHCCCCCCEEEEEEC
>Mature Secondary Structure
MKRNLLFIILLLLLPGLHQVFATSTIKKVAPTFWWAGMKNPELQILLYGDRISSADVSLS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEE
ADNITLQEVVKQENPNYLVLYLDLSKAAPQNFDIILKQGKKQTKIPYELKQRRPNASAVE
CCCEEHHHHHHCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCHHHHHCCCCCHHHC
GFDSSDVLYLIMPDRFANGNPSNDIIPGMLEGNVDRNEPFARHGGDLKGIENHLDYIADL
CCCCCCEEEEEECCCCCCCCCCCCCCCCHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHHC
GVTSIWLNPIQENDMKEGSYHGYAITDYYQVDRRFGSNEEFRKLTQEANAKGLKVVMDMI
CCCEEEECCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHH
FNHCGSDNYLFKDMPSKDWFNFEGNYVQTSFKTATQMDPYASDYEKKIAIDGWFTLTMPD
HHHCCCCCEEECCCCCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCEEEEEEEEEEECCC
FNQRNRHVATYLIQSSIWWIEYAGINGIRQDTHPYADFDMMARWCKAVNEEYPKFNIVGE
CCCCCCCEEEHEECCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEC
TWLGNNVLISYWQKDSRLAYPKNSNLPTVMDFPLMEEMNKAFDEETTEWNGGLFRLYEYL
EECCCCEEEEEECCCCEEECCCCCCCCEEECCHHHHHHHHHHCCCCCCCCCCHHHHHHHH
SQDIVYSHPMSLLTFLDNHDTSRFYRSEADTKNLDRYKQALTFLLTTRGIPQIYYGTEIL
HHHHHHHCHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCEEE
MAADKANGDGLLRCDFPGGWPNDTKNCFDAANRTPQQNEAFSFMQKLLQWRKGNEVIAKG
EEECCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEECC
QLKHFAPNKGVYVYERKYGDKSVVVFLNGNDREQTIDLVPYQEILPASSAFDLLTEKKVE
CHHHCCCCCCEEEEEEECCCCEEEEEECCCCCCEEEEECCHHHHCCCCHHHHHHHHHHHH
LRNELTLPSREIYLLSF
HHHHCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1644767; 8425614 [H]