| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is susE
Identifier: 29349108
GI number: 29349108
Start: 4804544
End: 4805707
Strand: Reverse
Name: susE
Synonym: BT_3700
Alternate gene names: NA
Gene position: 4805707-4804544 (Counterclockwise)
Preceding gene: 29349109
Following gene: 29349107
Centisome position: 76.76
GC content: 47.68
Gene sequence:
>1164_bases ATGAAAAAAATATCCAACATATTACTCGCTGTCACCTTCGCACTGCCTCTATTTACGGCCTGCGAAACAGACAATGACAG CAATCCGATCCTGAACGAACCCGATACATTCACGCTCAATACGCCCGCGTATGCAGCCAACAATGTATATGACCTGAAGA ATGCCCAAACTGTAGAACTCACTTGTTCGCAACCGGACTACGGTTTTCCGGCAGCTACCACCTACACGGTACAAGCCTCA TTTGAACAGGATTTCATAGAAGCGACAGATGAGAGCAAAGCCAACTATACAGTGTTGGAAAGCACCTCCCCGACAGCAAA GATCAATGTGGATGCTTCCGAACTCAACAATGCGCTTCTCGACTTGTGGACGGCCGTGAACGGAGAGCAGGCAGAACTCC CTACCGAACCGGTAGCTGTATATATCCGCCTGAAGGCCAACATCACAAGCAGTGGAAAAGGAGTATGTTTTTCCAATGTG ATTGAGTTACCCAACGTTCTGATTTCCAAGAGCACCAGCTCATTGACACCTCCCAAGACAATGTTCATTGTAGGTTCTAT GCTGGATACCGACTGGAAAGTATGGAAACCGATGGCAGGTGTCTACGGTATGGACGGTCAGTTCTATTCAATGATTTACT TCGATGCCAACTCCGAGTTCAAGTTCGGAACAAAGGAAAACGAGTATATCGGTATTAACGACAACCGCGTGACGGTTACC GACAAAGCCGGAGCAGGAGTCAGCGGCAGTGACAACTTCGTCGTAGAAAACGCCGGATGGTATCTCTTCTACGTCAAAGC GGCTGTCAAAGGGGATGATTATCAGTTTACCATTACTTTCTACCCAGCTGAAGTGTATTTGTTCGGTAACACAACCGGCG GTTCATGGGCATTCAACGACGAATGGAAGTTTACGGTTCCCGCCACCAAAGACGGTAACTTCGTATCTCCTGCCATGACT GCAAGCGGAGAAGTCCGTATGTGCTTCAAGACAGACCTCGACTGGTGGAGAACTGAGTTTACACTCCATGACGGTGAAAT CTTCTATCGTGATTTCAACCTTATTGACAGTTGGACAGAAAAGGGAGACGGTTATTCCATACAGGGTTCAGCCGGCAATG TGATCCATCTGAACTTCACGGCAGGTACAGGAGAAAAGAAGTAA
Upstream 100 bases:
>100_bases TATCCTATCCCTGTATCGGATATAAACAATAACAGGAATATGTCACAAAATGAAGGCTATAAATAACCAAGAGTTCATCC TTATATAAAAGAATGCCATT
Downstream 100 bases:
>100_bases TTAACTTTAAAAAGAACGATTCATCATGAAAAAACATTTAATATACACAGGGATGTTTCTGGCAGCAATCGGATTTTCTG CCTGTAATGAAGATTTCAAG
Product: outer membrane protein SusE
Products: NA
Alternate protein names: Outer Membrane Protein SusE; Outer Membrane Protein SusF; Lipoprotein
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MKKISNILLAVTFALPLFTACETDNDSNPILNEPDTFTLNTPAYAANNVYDLKNAQTVELTCSQPDYGFPAATTYTVQAS FEQDFIEATDESKANYTVLESTSPTAKINVDASELNNALLDLWTAVNGEQAELPTEPVAVYIRLKANITSSGKGVCFSNV IELPNVLISKSTSSLTPPKTMFIVGSMLDTDWKVWKPMAGVYGMDGQFYSMIYFDANSEFKFGTKENEYIGINDNRVTVT DKAGAGVSGSDNFVVENAGWYLFYVKAAVKGDDYQFTITFYPAEVYLFGNTTGGSWAFNDEWKFTVPATKDGNFVSPAMT ASGEVRMCFKTDLDWWRTEFTLHDGEIFYRDFNLIDSWTEKGDGYSIQGSAGNVIHLNFTAGTGEKK
Sequences:
>Translated_387_residues MKKISNILLAVTFALPLFTACETDNDSNPILNEPDTFTLNTPAYAANNVYDLKNAQTVELTCSQPDYGFPAATTYTVQAS FEQDFIEATDESKANYTVLESTSPTAKINVDASELNNALLDLWTAVNGEQAELPTEPVAVYIRLKANITSSGKGVCFSNV IELPNVLISKSTSSLTPPKTMFIVGSMLDTDWKVWKPMAGVYGMDGQFYSMIYFDANSEFKFGTKENEYIGINDNRVTVT DKAGAGVSGSDNFVVENAGWYLFYVKAAVKGDDYQFTITFYPAEVYLFGNTTGGSWAFNDEWKFTVPATKDGNFVSPAMT ASGEVRMCFKTDLDWWRTEFTLHDGEIFYRDFNLIDSWTEKGDGYSIQGSAGNVIHLNFTAGTGEKK >Mature_387_residues MKKISNILLAVTFALPLFTACETDNDSNPILNEPDTFTLNTPAYAANNVYDLKNAQTVELTCSQPDYGFPAATTYTVQAS FEQDFIEATDESKANYTVLESTSPTAKINVDASELNNALLDLWTAVNGEQAELPTEPVAVYIRLKANITSSGKGVCFSNV IELPNVLISKSTSSLTPPKTMFIVGSMLDTDWKVWKPMAGVYGMDGQFYSMIYFDANSEFKFGTKENEYIGINDNRVTVT DKAGAGVSGSDNFVVENAGWYLFYVKAAVKGDDYQFTITFYPAEVYLFGNTTGGSWAFNDEWKFTVPATKDGNFVSPAMT ASGEVRMCFKTDLDWWRTEFTLHDGEIFYRDFNLIDSWTEKGDGYSIQGSAGNVIHLNFTAGTGEKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42755; Mature: 42755
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKISNILLAVTFALPLFTACETDNDSNPILNEPDTFTLNTPAYAANNVYDLKNAQTVEL CCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCEEEECCCCCCCCCEEECCCCEEEEE TCSQPDYGFPAATTYTVQASFEQDFIEATDESKANYTVLESTSPTAKINVDASELNNALL EECCCCCCCCCEEEEEEEECCCHHHHHCCCCCCCCEEEEECCCCCEEEEECHHHHHHHHH DLWTAVNGEQAELPTEPVAVYIRLKANITSSGKGVCFSNVIELPNVLISKSTSSLTPPKT HHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCHHHHHHCCCEEEECCCCCCCCCCE MFIVGSMLDTDWKVWKPMAGVYGMDGQFYSMIYFDANSEFKFGTKENEYIGINDNRVTVT EEEEEEECCCCCHHHCCCCCEECCCCCEEEEEEEECCCCEEECCCCCCEEECCCCEEEEE DKAGAGVSGSDNFVVENAGWYLFYVKAAVKGDDYQFTITFYPAEVYLFGNTTGGSWAFND ECCCCCCCCCCCEEEECCCEEEEEEEEEECCCCEEEEEEEEEEEEEEEECCCCCCEEECC EWKFTVPATKDGNFVSPAMTASGEVRMCFKTDLDWWRTEFTLHDGEIFYRDFNLIDSWTE CEEEEECCCCCCCEECCCCCCCCCEEEEEECCCCCEEEEEEEECCEEEEEECCHHHHHHC KGDGYSIQGSAGNVIHLNFTAGTGEKK CCCCEEEECCCCCEEEEEEECCCCCCC >Mature Secondary Structure MKKISNILLAVTFALPLFTACETDNDSNPILNEPDTFTLNTPAYAANNVYDLKNAQTVEL CCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCEEEECCCCCCCCCEEECCCCEEEEE TCSQPDYGFPAATTYTVQASFEQDFIEATDESKANYTVLESTSPTAKINVDASELNNALL EECCCCCCCCCEEEEEEEECCCHHHHHCCCCCCCCEEEEECCCCCEEEEECHHHHHHHHH DLWTAVNGEQAELPTEPVAVYIRLKANITSSGKGVCFSNVIELPNVLISKSTSSLTPPKT HHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCHHHHHHCCCEEEECCCCCCCCCCE MFIVGSMLDTDWKVWKPMAGVYGMDGQFYSMIYFDANSEFKFGTKENEYIGINDNRVTVT EEEEEEECCCCCHHHCCCCCEECCCCCEEEEEEEECCCCEEECCCCCCEEECCCCEEEEE DKAGAGVSGSDNFVVENAGWYLFYVKAAVKGDDYQFTITFYPAEVYLFGNTTGGSWAFND ECCCCCCCCCCCEEEECCCEEEEEEEEEECCCCEEEEEEEEEEEEEEEECCCCCCEEECC EWKFTVPATKDGNFVSPAMTASGEVRMCFKTDLDWWRTEFTLHDGEIFYRDFNLIDSWTE CEEEEECCCCCCCEECCCCCCCCCEEEEEECCCCCEEEEEEEECCEEEEEECCHHHHHHC KGDGYSIQGSAGNVIHLNFTAGTGEKK CCCCEEEECCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA