Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is susE

Identifier: 29349108

GI number: 29349108

Start: 4804544

End: 4805707

Strand: Reverse

Name: susE

Synonym: BT_3700

Alternate gene names: NA

Gene position: 4805707-4804544 (Counterclockwise)

Preceding gene: 29349109

Following gene: 29349107

Centisome position: 76.76

GC content: 47.68

Gene sequence:

>1164_bases
ATGAAAAAAATATCCAACATATTACTCGCTGTCACCTTCGCACTGCCTCTATTTACGGCCTGCGAAACAGACAATGACAG
CAATCCGATCCTGAACGAACCCGATACATTCACGCTCAATACGCCCGCGTATGCAGCCAACAATGTATATGACCTGAAGA
ATGCCCAAACTGTAGAACTCACTTGTTCGCAACCGGACTACGGTTTTCCGGCAGCTACCACCTACACGGTACAAGCCTCA
TTTGAACAGGATTTCATAGAAGCGACAGATGAGAGCAAAGCCAACTATACAGTGTTGGAAAGCACCTCCCCGACAGCAAA
GATCAATGTGGATGCTTCCGAACTCAACAATGCGCTTCTCGACTTGTGGACGGCCGTGAACGGAGAGCAGGCAGAACTCC
CTACCGAACCGGTAGCTGTATATATCCGCCTGAAGGCCAACATCACAAGCAGTGGAAAAGGAGTATGTTTTTCCAATGTG
ATTGAGTTACCCAACGTTCTGATTTCCAAGAGCACCAGCTCATTGACACCTCCCAAGACAATGTTCATTGTAGGTTCTAT
GCTGGATACCGACTGGAAAGTATGGAAACCGATGGCAGGTGTCTACGGTATGGACGGTCAGTTCTATTCAATGATTTACT
TCGATGCCAACTCCGAGTTCAAGTTCGGAACAAAGGAAAACGAGTATATCGGTATTAACGACAACCGCGTGACGGTTACC
GACAAAGCCGGAGCAGGAGTCAGCGGCAGTGACAACTTCGTCGTAGAAAACGCCGGATGGTATCTCTTCTACGTCAAAGC
GGCTGTCAAAGGGGATGATTATCAGTTTACCATTACTTTCTACCCAGCTGAAGTGTATTTGTTCGGTAACACAACCGGCG
GTTCATGGGCATTCAACGACGAATGGAAGTTTACGGTTCCCGCCACCAAAGACGGTAACTTCGTATCTCCTGCCATGACT
GCAAGCGGAGAAGTCCGTATGTGCTTCAAGACAGACCTCGACTGGTGGAGAACTGAGTTTACACTCCATGACGGTGAAAT
CTTCTATCGTGATTTCAACCTTATTGACAGTTGGACAGAAAAGGGAGACGGTTATTCCATACAGGGTTCAGCCGGCAATG
TGATCCATCTGAACTTCACGGCAGGTACAGGAGAAAAGAAGTAA

Upstream 100 bases:

>100_bases
TATCCTATCCCTGTATCGGATATAAACAATAACAGGAATATGTCACAAAATGAAGGCTATAAATAACCAAGAGTTCATCC
TTATATAAAAGAATGCCATT

Downstream 100 bases:

>100_bases
TTAACTTTAAAAAGAACGATTCATCATGAAAAAACATTTAATATACACAGGGATGTTTCTGGCAGCAATCGGATTTTCTG
CCTGTAATGAAGATTTCAAG

Product: outer membrane protein SusE

Products: NA

Alternate protein names: Outer Membrane Protein SusE; Outer Membrane Protein SusF; Lipoprotein

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MKKISNILLAVTFALPLFTACETDNDSNPILNEPDTFTLNTPAYAANNVYDLKNAQTVELTCSQPDYGFPAATTYTVQAS
FEQDFIEATDESKANYTVLESTSPTAKINVDASELNNALLDLWTAVNGEQAELPTEPVAVYIRLKANITSSGKGVCFSNV
IELPNVLISKSTSSLTPPKTMFIVGSMLDTDWKVWKPMAGVYGMDGQFYSMIYFDANSEFKFGTKENEYIGINDNRVTVT
DKAGAGVSGSDNFVVENAGWYLFYVKAAVKGDDYQFTITFYPAEVYLFGNTTGGSWAFNDEWKFTVPATKDGNFVSPAMT
ASGEVRMCFKTDLDWWRTEFTLHDGEIFYRDFNLIDSWTEKGDGYSIQGSAGNVIHLNFTAGTGEKK

Sequences:

>Translated_387_residues
MKKISNILLAVTFALPLFTACETDNDSNPILNEPDTFTLNTPAYAANNVYDLKNAQTVELTCSQPDYGFPAATTYTVQAS
FEQDFIEATDESKANYTVLESTSPTAKINVDASELNNALLDLWTAVNGEQAELPTEPVAVYIRLKANITSSGKGVCFSNV
IELPNVLISKSTSSLTPPKTMFIVGSMLDTDWKVWKPMAGVYGMDGQFYSMIYFDANSEFKFGTKENEYIGINDNRVTVT
DKAGAGVSGSDNFVVENAGWYLFYVKAAVKGDDYQFTITFYPAEVYLFGNTTGGSWAFNDEWKFTVPATKDGNFVSPAMT
ASGEVRMCFKTDLDWWRTEFTLHDGEIFYRDFNLIDSWTEKGDGYSIQGSAGNVIHLNFTAGTGEKK
>Mature_387_residues
MKKISNILLAVTFALPLFTACETDNDSNPILNEPDTFTLNTPAYAANNVYDLKNAQTVELTCSQPDYGFPAATTYTVQAS
FEQDFIEATDESKANYTVLESTSPTAKINVDASELNNALLDLWTAVNGEQAELPTEPVAVYIRLKANITSSGKGVCFSNV
IELPNVLISKSTSSLTPPKTMFIVGSMLDTDWKVWKPMAGVYGMDGQFYSMIYFDANSEFKFGTKENEYIGINDNRVTVT
DKAGAGVSGSDNFVVENAGWYLFYVKAAVKGDDYQFTITFYPAEVYLFGNTTGGSWAFNDEWKFTVPATKDGNFVSPAMT
ASGEVRMCFKTDLDWWRTEFTLHDGEIFYRDFNLIDSWTEKGDGYSIQGSAGNVIHLNFTAGTGEKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42755; Mature: 42755

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKISNILLAVTFALPLFTACETDNDSNPILNEPDTFTLNTPAYAANNVYDLKNAQTVEL
CCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCEEEECCCCCCCCCEEECCCCEEEEE
TCSQPDYGFPAATTYTVQASFEQDFIEATDESKANYTVLESTSPTAKINVDASELNNALL
EECCCCCCCCCEEEEEEEECCCHHHHHCCCCCCCCEEEEECCCCCEEEEECHHHHHHHHH
DLWTAVNGEQAELPTEPVAVYIRLKANITSSGKGVCFSNVIELPNVLISKSTSSLTPPKT
HHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCHHHHHHCCCEEEECCCCCCCCCCE
MFIVGSMLDTDWKVWKPMAGVYGMDGQFYSMIYFDANSEFKFGTKENEYIGINDNRVTVT
EEEEEEECCCCCHHHCCCCCEECCCCCEEEEEEEECCCCEEECCCCCCEEECCCCEEEEE
DKAGAGVSGSDNFVVENAGWYLFYVKAAVKGDDYQFTITFYPAEVYLFGNTTGGSWAFND
ECCCCCCCCCCCEEEECCCEEEEEEEEEECCCCEEEEEEEEEEEEEEEECCCCCCEEECC
EWKFTVPATKDGNFVSPAMTASGEVRMCFKTDLDWWRTEFTLHDGEIFYRDFNLIDSWTE
CEEEEECCCCCCCEECCCCCCCCCEEEEEECCCCCEEEEEEEECCEEEEEECCHHHHHHC
KGDGYSIQGSAGNVIHLNFTAGTGEKK
CCCCEEEECCCCCEEEEEEECCCCCCC
>Mature Secondary Structure
MKKISNILLAVTFALPLFTACETDNDSNPILNEPDTFTLNTPAYAANNVYDLKNAQTVEL
CCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCEEEECCCCCCCCCEEECCCCEEEEE
TCSQPDYGFPAATTYTVQASFEQDFIEATDESKANYTVLESTSPTAKINVDASELNNALL
EECCCCCCCCCEEEEEEEECCCHHHHHCCCCCCCCEEEEECCCCCEEEEECHHHHHHHHH
DLWTAVNGEQAELPTEPVAVYIRLKANITSSGKGVCFSNVIELPNVLISKSTSSLTPPKT
HHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCHHHHHHCCCEEEECCCCCCCCCCE
MFIVGSMLDTDWKVWKPMAGVYGMDGQFYSMIYFDANSEFKFGTKENEYIGINDNRVTVT
EEEEEEECCCCCHHHCCCCCEECCCCCEEEEEEEECCCCEEECCCCCCEEECCCCEEEEE
DKAGAGVSGSDNFVVENAGWYLFYVKAAVKGDDYQFTITFYPAEVYLFGNTTGGSWAFND
ECCCCCCCCCCCEEEECCCEEEEEEEEEECCCCEEEEEEEEEEEEEEEECCCCCCEEECC
EWKFTVPATKDGNFVSPAMTASGEVRMCFKTDLDWWRTEFTLHDGEIFYRDFNLIDSWTE
CEEEEECCCCCCCEECCCCCCCCCEEEEEECCCCCEEEEEEEECCEEEEEECCHHHHHHC
KGDGYSIQGSAGNVIHLNFTAGTGEKK
CCCCEEEECCCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA