| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349036
Identifier: 29349036
GI number: 29349036
Start: 4700594
End: 4701160
Strand: Reverse
Name: 29349036
Synonym: BT_3628
Alternate gene names: NA
Gene position: 4701160-4700594 (Counterclockwise)
Preceding gene: 29349037
Following gene: 29349035
Centisome position: 75.09
GC content: 47.62
Gene sequence:
>567_bases ATGAAGTGGAGTAGCAGCATCCGTAAATGGAGTAGGCTGATACACCGTGATTTATCCTTTTTCTTTGCCGGAATGGTCTT GATTTATGCCATTTCCGGCATTGTGATGAATCACCGTGACACCATCAACCCGAACTTCTCCATCGAACGGAAAGAATATA AGATTGCCGAAAAACTGCCGGGCAAAGAGGGAATGAAAAGGGAAAATGTACTGACTCTGCTGCAACCATTGGGAGAGGAA GGTAACTATACCAAGCACTATTTCCCGAAAGCGGACATCATGAAAGTGTTCTTGAAAGGCGGGTCCAACTTGCAGGTAAA CGTCCGTACGGGAGAGGCAGTCTACGAATCTGTCACCCGCCGCCCGCTCATCGGAGCAATGGCACGCCTGCACTACAACC CCGGACAATGGTGGACTTACTTTGCGGATATTTTCGCAGTCGGCCTCATCATCATCACCCTTTCCGGAGTCATCATGCTG AAAGGCAACAAAGGTATTATCGGCAGAGGAGGAATAGAAATGATTGTCGGAATCGTGATTCCCATCCTTTTTCTTCTCTT CTTTTGA
Upstream 100 bases:
>100_bases CCCGAAGCCCGTATCGCCGACTTCCGCGCGAAGATAGCCGACCGAAAAGCAAGCAGCGGCAAAGAGTATCTGTCTTTCTA TTTCATGGAAGCTAATTCGT
Downstream 100 bases:
>100_bases ACAGAATAACTGATAAAATAAAATGGAACAAATCATAGAATGTAACAACCTGACGCACTACTACGGCAAACGGTTGATTT ACGAAAATCTTAGTTTCACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MKWSSSIRKWSRLIHRDLSFFFAGMVLIYAISGIVMNHRDTINPNFSIERKEYKIAEKLPGKEGMKRENVLTLLQPLGEE GNYTKHYFPKADIMKVFLKGGSNLQVNVRTGEAVYESVTRRPLIGAMARLHYNPGQWWTYFADIFAVGLIIITLSGVIML KGNKGIIGRGGIEMIVGIVIPILFLLFF
Sequences:
>Translated_188_residues MKWSSSIRKWSRLIHRDLSFFFAGMVLIYAISGIVMNHRDTINPNFSIERKEYKIAEKLPGKEGMKRENVLTLLQPLGEE GNYTKHYFPKADIMKVFLKGGSNLQVNVRTGEAVYESVTRRPLIGAMARLHYNPGQWWTYFADIFAVGLIIITLSGVIML KGNKGIIGRGGIEMIVGIVIPILFLLFF >Mature_188_residues MKWSSSIRKWSRLIHRDLSFFFAGMVLIYAISGIVMNHRDTINPNFSIERKEYKIAEKLPGKEGMKRENVLTLLQPLGEE GNYTKHYFPKADIMKVFLKGGSNLQVNVRTGEAVYESVTRRPLIGAMARLHYNPGQWWTYFADIFAVGLIIITLSGVIML KGNKGIIGRGGIEMIVGIVIPILFLLFF
Specific function: Unknown
COG id: COG3295
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21368; Mature: 21368
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWSSSIRKWSRLIHRDLSFFFAGMVLIYAISGIVMNHRDTINPNFSIERKEYKIAEKLP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHCC GKEGMKRENVLTLLQPLGEEGNYTKHYFPKADIMKVFLKGGSNLQVNVRTGEAVYESVTR CCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHC RPLIGAMARLHYNPGQWWTYFADIFAVGLIIITLSGVIMLKGNKGIIGRGGIEMIVGIVI CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEECCHHHHHHHHHH PILFLLFF HHHHHHHC >Mature Secondary Structure MKWSSSIRKWSRLIHRDLSFFFAGMVLIYAISGIVMNHRDTINPNFSIERKEYKIAEKLP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHCC GKEGMKRENVLTLLQPLGEEGNYTKHYFPKADIMKVFLKGGSNLQVNVRTGEAVYESVTR CCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHC RPLIGAMARLHYNPGQWWTYFADIFAVGLIIITLSGVIMLKGNKGIIGRGGIEMIVGIVI CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEECCHHHHHHHHHH PILFLLFF HHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA