Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

Click here to switch to the map view.

The map label for this gene is 29349036

Identifier: 29349036

GI number: 29349036

Start: 4700594

End: 4701160

Strand: Reverse

Name: 29349036

Synonym: BT_3628

Alternate gene names: NA

Gene position: 4701160-4700594 (Counterclockwise)

Preceding gene: 29349037

Following gene: 29349035

Centisome position: 75.09

GC content: 47.62

Gene sequence:

>567_bases
ATGAAGTGGAGTAGCAGCATCCGTAAATGGAGTAGGCTGATACACCGTGATTTATCCTTTTTCTTTGCCGGAATGGTCTT
GATTTATGCCATTTCCGGCATTGTGATGAATCACCGTGACACCATCAACCCGAACTTCTCCATCGAACGGAAAGAATATA
AGATTGCCGAAAAACTGCCGGGCAAAGAGGGAATGAAAAGGGAAAATGTACTGACTCTGCTGCAACCATTGGGAGAGGAA
GGTAACTATACCAAGCACTATTTCCCGAAAGCGGACATCATGAAAGTGTTCTTGAAAGGCGGGTCCAACTTGCAGGTAAA
CGTCCGTACGGGAGAGGCAGTCTACGAATCTGTCACCCGCCGCCCGCTCATCGGAGCAATGGCACGCCTGCACTACAACC
CCGGACAATGGTGGACTTACTTTGCGGATATTTTCGCAGTCGGCCTCATCATCATCACCCTTTCCGGAGTCATCATGCTG
AAAGGCAACAAAGGTATTATCGGCAGAGGAGGAATAGAAATGATTGTCGGAATCGTGATTCCCATCCTTTTTCTTCTCTT
CTTTTGA

Upstream 100 bases:

>100_bases
CCCGAAGCCCGTATCGCCGACTTCCGCGCGAAGATAGCCGACCGAAAAGCAAGCAGCGGCAAAGAGTATCTGTCTTTCTA
TTTCATGGAAGCTAATTCGT

Downstream 100 bases:

>100_bases
ACAGAATAACTGATAAAATAAAATGGAACAAATCATAGAATGTAACAACCTGACGCACTACTACGGCAAACGGTTGATTT
ACGAAAATCTTAGTTTCACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MKWSSSIRKWSRLIHRDLSFFFAGMVLIYAISGIVMNHRDTINPNFSIERKEYKIAEKLPGKEGMKRENVLTLLQPLGEE
GNYTKHYFPKADIMKVFLKGGSNLQVNVRTGEAVYESVTRRPLIGAMARLHYNPGQWWTYFADIFAVGLIIITLSGVIML
KGNKGIIGRGGIEMIVGIVIPILFLLFF

Sequences:

>Translated_188_residues
MKWSSSIRKWSRLIHRDLSFFFAGMVLIYAISGIVMNHRDTINPNFSIERKEYKIAEKLPGKEGMKRENVLTLLQPLGEE
GNYTKHYFPKADIMKVFLKGGSNLQVNVRTGEAVYESVTRRPLIGAMARLHYNPGQWWTYFADIFAVGLIIITLSGVIML
KGNKGIIGRGGIEMIVGIVIPILFLLFF
>Mature_188_residues
MKWSSSIRKWSRLIHRDLSFFFAGMVLIYAISGIVMNHRDTINPNFSIERKEYKIAEKLPGKEGMKRENVLTLLQPLGEE
GNYTKHYFPKADIMKVFLKGGSNLQVNVRTGEAVYESVTRRPLIGAMARLHYNPGQWWTYFADIFAVGLIIITLSGVIML
KGNKGIIGRGGIEMIVGIVIPILFLLFF

Specific function: Unknown

COG id: COG3295

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21368; Mature: 21368

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWSSSIRKWSRLIHRDLSFFFAGMVLIYAISGIVMNHRDTINPNFSIERKEYKIAEKLP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHCC
GKEGMKRENVLTLLQPLGEEGNYTKHYFPKADIMKVFLKGGSNLQVNVRTGEAVYESVTR
CCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHC
RPLIGAMARLHYNPGQWWTYFADIFAVGLIIITLSGVIMLKGNKGIIGRGGIEMIVGIVI
CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEECCHHHHHHHHHH
PILFLLFF
HHHHHHHC
>Mature Secondary Structure
MKWSSSIRKWSRLIHRDLSFFFAGMVLIYAISGIVMNHRDTINPNFSIERKEYKIAEKLP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHCC
GKEGMKRENVLTLLQPLGEEGNYTKHYFPKADIMKVFLKGGSNLQVNVRTGEAVYESVTR
CCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHC
RPLIGAMARLHYNPGQWWTYFADIFAVGLIIITLSGVIMLKGNKGIIGRGGIEMIVGIVI
CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEECCHHHHHHHHHH
PILFLLFF
HHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA