| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349013
Identifier: 29349013
GI number: 29349013
Start: 4672362
End: 4673528
Strand: Reverse
Name: 29349013
Synonym: BT_3605
Alternate gene names: NA
Gene position: 4673528-4672362 (Counterclockwise)
Preceding gene: 29349014
Following gene: 29349012
Centisome position: 74.65
GC content: 40.79
Gene sequence:
>1167_bases ATGGATTTAAAAAAATTAGCAAACCAATACAAAGACGAACTACTGAATAATGTTCTTCCATTCTGGTTAGAGCATTCTCA GGATCACGAATTCGGTGGCTATTTCACTTGTCTGGATCGTGAAGGCAACGTATTCGATACAGATAAATTTATTTGGCTGC AAGGACGCGAAGTTTGGTTATTCTCAATGCTTTACAATAAAGTTGAGAAAAAACAGGAATGGCTGGATTGCGCTATTCAA GGCAGTGAATTTCTAAAGAAATACGGACATGATGGAAACTATCATTGGTATTTTTCTTTGGATCGGGCAGGTAATCCTCT GGTAGAACCATACAACATCTTTTCCTATACATTTGCTACAATGGCTTTCGGGCAACTCAGTCTGGCTACAGGCAATCAGG AATATGCTGACATTGCAAAGAAAACGTTCGATATTATTCTCTCAAAGGCAGATAATCCGAAAGGTAAATGGAACAAAATC CATCCGGGCACACGTAATCTGAAAAATTTCGCCCTCCCGATGATCCTTTGTAATCTGGCACTTGAAATAGAACACTTGTT GGACAAAGAGTATCTGGAAAAAACAATAGAGACTTGTATCCATGAAGTGATGGAAGTATTCTATCGCCCGGAGCTAGGAG GAATTATTGTTGAAAACATAGGAGTGGACGGCAATCTCGTAGACTGTTTTGAAGGACGGCAAGTGACTCCCGGACACGAC ATCGAAGCGATGTGGTTTATCATGGATTTAGGAAAACGCCTGAATCGCCCTGATCTAATCGAAAAGGCAAAAAATGTAAC CTTGACGATGATTAACTACGGATGGGACAAAGAATATGGTGGCATCTACTATTTTATGGACCGCAAAGGTTGCCCTCCCC AACAACTGGAATGGGACCAAAAACTTTGGTGGGTACACATTGAAACACTTATTTCCCTACTAAAAGGTTACCAATTGACA GGTGACAAACAATGTATGGAGTGGTTCGAGAAAATACATGAGTATGTATGGACGCACTTCAAAGATGCTCAATATCCTGA ATGGTTCGGTTACTTAAACCGCCAGGGAGAAGTACTTCTGCCACTTAAAGGAGGCAAATGGAAAGGCTGTTTCCATGTCC CCAGGGGCTTATATCAATGCTGGAAAGTACTAGAAGAATTACAATAA
Upstream 100 bases:
>100_bases TCGTACCGGAAACTACCGGAAAGTCTCTGGAGGAGATTGAAAGATACTGGACCCGTTCGGAACGGTAAAATAGACCTTAT TAAATAAAAAACTAACAATT
Downstream 100 bases:
>100_bases ATCTAATACCCAAAAACTTTTTTATTAACCAATTAAATTTTATCTTATGATGGAACAATGCTTTAAGCAAAAAAGTAGTT TCCGAACAATCAGAATCATA
Product: N-acylglucosamine 2-epimerase
Products: NA
Alternate protein names: N-Acyl-D-Glucosamine 2-Epimerase; N-Acylglucosamine 2-Epimerase Superfamily; LOW QUALITY PROTEIN N-Acyl-D-Glucosamine 2-Epimerase; N-Acyl-D-Glucosamine 2-Epimerase-Like Protein
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MDLKKLANQYKDELLNNVLPFWLEHSQDHEFGGYFTCLDREGNVFDTDKFIWLQGREVWLFSMLYNKVEKKQEWLDCAIQ GSEFLKKYGHDGNYHWYFSLDRAGNPLVEPYNIFSYTFATMAFGQLSLATGNQEYADIAKKTFDIILSKADNPKGKWNKI HPGTRNLKNFALPMILCNLALEIEHLLDKEYLEKTIETCIHEVMEVFYRPELGGIIVENIGVDGNLVDCFEGRQVTPGHD IEAMWFIMDLGKRLNRPDLIEKAKNVTLTMINYGWDKEYGGIYYFMDRKGCPPQQLEWDQKLWWVHIETLISLLKGYQLT GDKQCMEWFEKIHEYVWTHFKDAQYPEWFGYLNRQGEVLLPLKGGKWKGCFHVPRGLYQCWKVLEELQ
Sequences:
>Translated_388_residues MDLKKLANQYKDELLNNVLPFWLEHSQDHEFGGYFTCLDREGNVFDTDKFIWLQGREVWLFSMLYNKVEKKQEWLDCAIQ GSEFLKKYGHDGNYHWYFSLDRAGNPLVEPYNIFSYTFATMAFGQLSLATGNQEYADIAKKTFDIILSKADNPKGKWNKI HPGTRNLKNFALPMILCNLALEIEHLLDKEYLEKTIETCIHEVMEVFYRPELGGIIVENIGVDGNLVDCFEGRQVTPGHD IEAMWFIMDLGKRLNRPDLIEKAKNVTLTMINYGWDKEYGGIYYFMDRKGCPPQQLEWDQKLWWVHIETLISLLKGYQLT GDKQCMEWFEKIHEYVWTHFKDAQYPEWFGYLNRQGEVLLPLKGGKWKGCFHVPRGLYQCWKVLEELQ >Mature_388_residues MDLKKLANQYKDELLNNVLPFWLEHSQDHEFGGYFTCLDREGNVFDTDKFIWLQGREVWLFSMLYNKVEKKQEWLDCAIQ GSEFLKKYGHDGNYHWYFSLDRAGNPLVEPYNIFSYTFATMAFGQLSLATGNQEYADIAKKTFDIILSKADNPKGKWNKI HPGTRNLKNFALPMILCNLALEIEHLLDKEYLEKTIETCIHEVMEVFYRPELGGIIVENIGVDGNLVDCFEGRQVTPGHD IEAMWFIMDLGKRLNRPDLIEKAKNVTLTMINYGWDKEYGGIYYFMDRKGCPPQQLEWDQKLWWVHIETLISLLKGYQLT GDKQCMEWFEKIHEYVWTHFKDAQYPEWFGYLNRQGEVLLPLKGGKWKGCFHVPRGLYQCWKVLEELQ
Specific function: Unknown
COG id: COG2942
COG function: function code G; N-acyl-D-glucosamine 2-epimerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI213417820, Length=382, Percent_Identity=38.4816753926702, Blast_Score=255, Evalue=5e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45787; Mature: 45787
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLKKLANQYKDELLNNVLPFWLEHSQDHEFGGYFTCLDREGNVFDTDKFIWLQGREVWL CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEECCCCEEEEECCHHHH FSMLYNKVEKKQEWLDCAIQGSEFLKKYGHDGNYHWYFSLDRAGNPLVEPYNIFSYTFAT HHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHH MAFGQLSLATGNQEYADIAKKTFDIILSKADNPKGKWNKIHPGTRNLKNFALPMILCNLA HHHCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH LEIEHLLDKEYLEKTIETCIHEVMEVFYRPELGGIIVENIGVDGNLVDCFEGRQVTPGHD HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEECCCCCCCCCCCC IEAMWFIMDLGKRLNRPDLIEKAKNVTLTMINYGWDKEYGGIYYFMDRKGCPPQQLEWDQ HHHHHHHHHHHHHCCCCHHHHHHCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCH KLWWVHIETLISLLKGYQLTGDKQCMEWFEKIHEYVWTHFKDAQYPEWFGYLNRQGEVLL HHHEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEE PLKGGKWKGCFHVPRGLYQCWKVLEELQ EECCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDLKKLANQYKDELLNNVLPFWLEHSQDHEFGGYFTCLDREGNVFDTDKFIWLQGREVWL CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEECCCCEEEEECCHHHH FSMLYNKVEKKQEWLDCAIQGSEFLKKYGHDGNYHWYFSLDRAGNPLVEPYNIFSYTFAT HHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHH MAFGQLSLATGNQEYADIAKKTFDIILSKADNPKGKWNKIHPGTRNLKNFALPMILCNLA HHHCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH LEIEHLLDKEYLEKTIETCIHEVMEVFYRPELGGIIVENIGVDGNLVDCFEGRQVTPGHD HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEECCCCCCCCCCCC IEAMWFIMDLGKRLNRPDLIEKAKNVTLTMINYGWDKEYGGIYYFMDRKGCPPQQLEWDQ HHHHHHHHHHHHHCCCCHHHHHHCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCH KLWWVHIETLISLLKGYQLTGDKQCMEWFEKIHEYVWTHFKDAQYPEWFGYLNRQGEVLL HHHEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEE PLKGGKWKGCFHVPRGLYQCWKVLEELQ EECCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA