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The map label for this gene is ydjH [C]

Identifier: 29348985

GI number: 29348985

Start: 4628820

End: 4629710

Strand: Reverse

Name: ydjH [C]

Synonym: BT_3576

Alternate gene names: 29348985

Gene position: 4629710-4628820 (Counterclockwise)

Preceding gene: 29348986

Following gene: 29348978

Centisome position: 73.95

GC content: 46.35

Gene sequence:

>891_bases
ATGAAGAAACATCAACTTTGCTGCATCGGCCATATCACTTTGGATAAGGTAGTCACTCCTCAAAGCACAGTCTATATGCC
TGGAGGCACAGCTTTCTATTGTTCACACGCTATCCGCCATTTCAATGACATAGATTATGCATTAGTGACAGCAGTCGGCG
CTACGGAAATGAAAGTAGTAGACCAGCTGCGCGGGATAGGCATCAGCGTAACCGCATTACCCAGCCAGCACTCTGTATAC
TTCGAGAACATCTATGGAGAAAATCCGGATGACCGTACACAACGTGTGTTGGCTAAAGCCGATCCTTTCACCGCTTCCCA
GCTTCAGGAGATAGAGGCGGAAATTTATCATCTTGGTTCGCTGTTAGCAGATGATTTTTCTTTAGAAGTGATTAAGGAGT
TATCCCGGAAAGGATTGATAGCTGTCGATTCGCAAGGATACCTGCGTGAAGTACGTGATACGCACGTATACCCGGTAGAC
TGGACTGACAAGCGGGAAGCTCTGCAATATATTCATTTCCTTAAAGTAAATGAGCACGAAATGGAAGTGCTCACAGGACT
TTCCGATCCGCATGAGGCCGCACGTAAACTGCACGAATGGGGAGTGAAAGAAGTATTAGTCACTTTAGGAAGTATGGGGT
CTCTCATTTACGACGGTACGGATTTTTATCGCATTCCGGCTTATAAACCCGGACAAGTAGTAGATGCAACCGGCTGTGGA
GATACTTATACTATCGGATATTTGTATCAACGGGTATCGGGTGCGAGCATCGAAGAAGCAGGTCGGTTTGCTGCCGCCAT
GTCTACGCTGAAGATCGAGAAATCCGGTCCTTTCTGTGGAAATAAGGAAGATGTTATTCGATGTATGGAGACTGCGGAGC
AGATGTACTAA

Upstream 100 bases:

>100_bases
CCGTGAGGCGTGTAGGTTCGAGTCCTATCATCCGCACACATTTATATAAACTAGAAAGCCTTCAAGAAATATCTTGGGGG
CTTTTTAATTGATTACATAT

Downstream 100 bases:

>100_bases
AAGAGAGCCATACAGGCGTTAATATCAATAAGCAGAGCGCTGTTTTATCTTGAAAAAGGATGAAACAGCGCTCTGTTTAT
TAACTACTTTTTTCTCCTGT

Product: putative ribokinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MKKHQLCCIGHITLDKVVTPQSTVYMPGGTAFYCSHAIRHFNDIDYALVTAVGATEMKVVDQLRGIGISVTALPSQHSVY
FENIYGENPDDRTQRVLAKADPFTASQLQEIEAEIYHLGSLLADDFSLEVIKELSRKGLIAVDSQGYLREVRDTHVYPVD
WTDKREALQYIHFLKVNEHEMEVLTGLSDPHEAARKLHEWGVKEVLVTLGSMGSLIYDGTDFYRIPAYKPGQVVDATGCG
DTYTIGYLYQRVSGASIEEAGRFAAAMSTLKIEKSGPFCGNKEDVIRCMETAEQMY

Sequences:

>Translated_296_residues
MKKHQLCCIGHITLDKVVTPQSTVYMPGGTAFYCSHAIRHFNDIDYALVTAVGATEMKVVDQLRGIGISVTALPSQHSVY
FENIYGENPDDRTQRVLAKADPFTASQLQEIEAEIYHLGSLLADDFSLEVIKELSRKGLIAVDSQGYLREVRDTHVYPVD
WTDKREALQYIHFLKVNEHEMEVLTGLSDPHEAARKLHEWGVKEVLVTLGSMGSLIYDGTDFYRIPAYKPGQVVDATGCG
DTYTIGYLYQRVSGASIEEAGRFAAAMSTLKIEKSGPFCGNKEDVIRCMETAEQMY
>Mature_296_residues
MKKHQLCCIGHITLDKVVTPQSTVYMPGGTAFYCSHAIRHFNDIDYALVTAVGATEMKVVDQLRGIGISVTALPSQHSVY
FENIYGENPDDRTQRVLAKADPFTASQLQEIEAEIYHLGSLLADDFSLEVIKELSRKGLIAVDSQGYLREVRDTHVYPVD
WTDKREALQYIHFLKVNEHEMEVLTGLSDPHEAARKLHEWGVKEVLVTLGSMGSLIYDGTDFYRIPAYKPGQVVDATGCG
DTYTIGYLYQRVSGASIEEAGRFAAAMSTLKIEKSGPFCGNKEDVIRCMETAEQMY

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173
- InterPro:   IPR002139 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: NA

Molecular weight: Translated: 33043; Mature: 33043

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKHQLCCIGHITLDKVVTPQSTVYMPGGTAFYCSHAIRHFNDIDYALVTAVGATEMKVV
CCCCCEEEEECEEHHHEECCCCEEEECCCCHHHHHHHHHHCCCCCHHHHHHCCCHHHHHH
DQLRGIGISVTALPSQHSVYFENIYGENPDDRTQRVLAKADPFTASQLQEIEAEIYHLGS
HHHHCCCEEEEECCCCCCEEEHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LLADDFSLEVIKELSRKGLIAVDSQGYLREVRDTHVYPVDWTDKREALQYIHFLKVNEHE
HHHCCHHHHHHHHHHHCCEEEECCCHHHHHHHHCEEECCCCCCHHHHHHHHHHHCCCCHH
MEVLTGLSDPHEAARKLHEWGVKEVLVTLGSMGSLIYDGTDFYRIPAYKPGQVVDATGCG
HHHHHCCCCHHHHHHHHHHCCHHHHHHHHHCCCCEEECCCCEEECCCCCCCCEEECCCCC
DTYTIGYLYQRVSGASIEEAGRFAAAMSTLKIEKSGPFCGNKEDVIRCMETAEQMY
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKHQLCCIGHITLDKVVTPQSTVYMPGGTAFYCSHAIRHFNDIDYALVTAVGATEMKVV
CCCCCEEEEECEEHHHEECCCCEEEECCCCHHHHHHHHHHCCCCCHHHHHHCCCHHHHHH
DQLRGIGISVTALPSQHSVYFENIYGENPDDRTQRVLAKADPFTASQLQEIEAEIYHLGS
HHHHCCCEEEEECCCCCCEEEHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LLADDFSLEVIKELSRKGLIAVDSQGYLREVRDTHVYPVDWTDKREALQYIHFLKVNEHE
HHHCCHHHHHHHHHHHCCEEEECCCHHHHHHHHCEEECCCCCCHHHHHHHHHHHCCCCHH
MEVLTGLSDPHEAARKLHEWGVKEVLVTLGSMGSLIYDGTDFYRIPAYKPGQVVDATGCG
HHHHHCCCCHHHHHHHHHHCCHHHHHHHHHCCCCEEECCCCEEECCCCCCCCEEECCCCC
DTYTIGYLYQRVSGASIEEAGRFAAAMSTLKIEKSGPFCGNKEDVIRCMETAEQMY
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]