Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348885

Identifier: 29348885

GI number: 29348885

Start: 4478552

End: 4479925

Strand: Reverse

Name: 29348885

Synonym: BT_3476

Alternate gene names: NA

Gene position: 4479925-4478552 (Counterclockwise)

Preceding gene: 29348886

Following gene: 29348884

Centisome position: 71.56

GC content: 38.21

Gene sequence:

>1374_bases
ATGAAAATGAAAAGTAAGACCAAAAGTTGCTGTCAGTACACTCAATGGGTAGTACTGGCTTTACTTACACTTATCTTTGC
AAGTTGCAAAGATAATGATGACGCAACAGGAGATTTTGATCCGAATAAGCCTGTTGTCATTTCTGAATTCAGTCCAAAAG
AAGGAGGACTTGGAACCCGAATGCTCTTGTATGGAGAAAACTTCGGAAGTGATATTTCTAAAATAAAGGTAACTATCGGT
GGACAAGACTCCAAAGTTGTAGGAGCAAAAGGAAAAAGCCTCTACTGTGTTGTGCCAGCTAAAGCTTATGATGGAGATAT
TAAATTAAGTATTCTCAACGATGAAGGTGAAGAAATTGCAAATACAGAAGCCAATGAGAAGTTTGTATATCAAAAGAAGA
TGCTTGTTACAACATTTCTAGGAACAATGTATGATGGAAACACCAAATATGATTTAAAAGATGGACCTTTTGATGATTGT
GGTGGCTTTGGAGGTGCTGTTTGGTTGTCCTTTGATCCCAAAAATCACAATCATTTATATCTAGTGGGTGAACAGCACCC
TACCCGTTTGATTGACTTTGAAAAAGAATATGTAAGTACCGTATATAGTGGATTAAGCAAAGTACGTACCATCTGCTGGA
CACATGAAGCTGACAGCATGATTATTACCAATGACCAAAATAATAATGATAGACCGAACAATTATATTCTTACACGTGAA
TCAGGATTCAAAGTTATAACAGAATTGACAAAAGGTCAAAACTGTAATGGTGCAGAAACTCATCCTATAAATGGAGAATT
ATATTTCAATTCATGGAATGCTGGTCAAGTGTTTCGATATGATTTTACAACTCAGGAAACTACCCCTTTGTTTACGATAC
AAGATAGTGGATGGGAGTTTCATATCCAATTCCACCCTAGCGGAAACTATGCATACATTGTAGTAGTTAATCAACATTAC
ATCTTACGTTCTGATTATGACTGGAAGACAAAGCGCCTTACCACCCCATATATTGTTTGTGGTCAGCAGGGTGCCAAAGA
TTGGGTAGATGGAGTTGGTAAAAAAGCCCGCATGCATGCTCCCCGACAAGGTACATTCGTAAAGAATCCAGCATACAAAG
GGAGCAGCGATGAATATGACTTTTATTTCTGTGATAGAGAAAACCACTGTATCCGTATCTTAACACCACAAGGTCGAGTA
ACGACATTTGCTGGTAGAGGCAGTAATGGAACTTCCGGATATAATGATGGTGATTTACGCCAAGAAGCACGCTTCAATCA
TCCTGAAGGAATCGTATACGATGAAGAAAGAGAATGTTTCTTTATAGGTGACCGTGAAAACCGCCGTATTCGCAAAATTG
GCTACGAAGAATAA

Upstream 100 bases:

>100_bases
CTGTAATCGGAGGATATTGGATGAAAGTACTAGTGAATAAGAATTCAAATAATCTGTAAAAATGCATACAAATATTTTTA
CCAATAAAATCCAATGTATT

Downstream 100 bases:

>100_bases
TACATGATTAACACATACATTTATATGATGAAAAACTTTTTATTTATATGCATGTTGTTGCTTGGACTTTCTACCAGTGC
TTTGGCACAAGAAAGCATTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 457; Mature: 457

Protein sequence:

>457_residues
MKMKSKTKSCCQYTQWVVLALLTLIFASCKDNDDATGDFDPNKPVVISEFSPKEGGLGTRMLLYGENFGSDISKIKVTIG
GQDSKVVGAKGKSLYCVVPAKAYDGDIKLSILNDEGEEIANTEANEKFVYQKKMLVTTFLGTMYDGNTKYDLKDGPFDDC
GGFGGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE
SGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHY
ILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTPQGRV
TTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYEE

Sequences:

>Translated_457_residues
MKMKSKTKSCCQYTQWVVLALLTLIFASCKDNDDATGDFDPNKPVVISEFSPKEGGLGTRMLLYGENFGSDISKIKVTIG
GQDSKVVGAKGKSLYCVVPAKAYDGDIKLSILNDEGEEIANTEANEKFVYQKKMLVTTFLGTMYDGNTKYDLKDGPFDDC
GGFGGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE
SGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHY
ILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTPQGRV
TTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYEE
>Mature_457_residues
MKMKSKTKSCCQYTQWVVLALLTLIFASCKDNDDATGDFDPNKPVVISEFSPKEGGLGTRMLLYGENFGSDISKIKVTIG
GQDSKVVGAKGKSLYCVVPAKAYDGDIKLSILNDEGEEIANTEANEKFVYQKKMLVTTFLGTMYDGNTKYDLKDGPFDDC
GGFGGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE
SGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHY
ILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTPQGRV
TTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51844; Mature: 51844

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMKSKTKSCCQYTQWVVLALLTLIFASCKDNDDATGDFDPNKPVVISEFSPKEGGLGTR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEE
MLLYGENFGSDISKIKVTIGGQDSKVVGAKGKSLYCVVPAKAYDGDIKLSILNDEGEEIA
EEEEECCCCCCCEEEEEEECCCCCEEEECCCCEEEEEEECCCCCCEEEEEEECCCCCHHH
NTEANEKFVYQKKMLVTTFLGTMYDGNTKYDLKDGPFDDCGGFGGAVWLSFDPKNHNHLY
CCCCCCEEEHHHHHHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCEEEEEECCCCCCEEE
LVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE
EEECCCCCEEEECHHHHHHHHHHHHHHHEEEEEECCCCCEEEECCCCCCCCCCCEEEECC
SGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEF
CCCEEEHHHHCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCEEEEEECCCEEE
HIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHA
EEEEECCCCEEEEEEEECEEEEECCCCCCCEECCCCEEEECCCCCHHHHHHCCCCCEECC
PRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTPQGRVTTFAGRGSNGTSGYNDGDLR
CCCCCEEECCCCCCCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCHH
QEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYEE
HHHCCCCCCCCEEECCCCEEEEECCCCCEEECCCCCC
>Mature Secondary Structure
MKMKSKTKSCCQYTQWVVLALLTLIFASCKDNDDATGDFDPNKPVVISEFSPKEGGLGTR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEE
MLLYGENFGSDISKIKVTIGGQDSKVVGAKGKSLYCVVPAKAYDGDIKLSILNDEGEEIA
EEEEECCCCCCCEEEEEEECCCCCEEEECCCCEEEEEEECCCCCCEEEEEEECCCCCHHH
NTEANEKFVYQKKMLVTTFLGTMYDGNTKYDLKDGPFDDCGGFGGAVWLSFDPKNHNHLY
CCCCCCEEEHHHHHHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCEEEEEECCCCCCEEE
LVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE
EEECCCCCEEEECHHHHHHHHHHHHHHHEEEEEECCCCCEEEECCCCCCCCCCCEEEECC
SGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEF
CCCEEEHHHHCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCEEEEEECCCEEE
HIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHA
EEEEECCCCEEEEEEEECEEEEECCCCCCCEECCCCEEEECCCCCHHHHHHCCCCCEECC
PRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTPQGRVTTFAGRGSNGTSGYNDGDLR
CCCCCEEECCCCCCCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCHH
QEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYEE
HHHCCCCCCCCEEECCCCEEEEECCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA