Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348880

Identifier: 29348880

GI number: 29348880

Start: 4470692

End: 4470934

Strand: Reverse

Name: 29348880

Synonym: BT_3471

Alternate gene names: NA

Gene position: 4470934-4470692 (Counterclockwise)

Preceding gene: 29348881

Following gene: 29348879

Centisome position: 71.42

GC content: 32.51

Gene sequence:

>243_bases
ATGAAAGATACAATCCTGACCGCTCGACGAAAGAAAACAGAGTTGATTACACTGTTCCTGTGTTTTATTATTGCCAATTT
GGTCAATTTATACTCTATATTTACGTATAATACTCCTTTGACGGAGATGATAACTTCATTTTTTTATGTGCTCATATTTT
CTGTAGCGCTATATATCATCTGGAGCCTTTTACGTATCCTCTTTTATGGCATAACAGCACTATTCAAAAAGAAAAAAGAA
TAA

Upstream 100 bases:

>100_bases
TATTGGGTCACCAAGCGTTACAGGAAGAAAAAACACTATATTTCCCTGATGAATACAAAATTAATTATCTGAATCATCAA
TCAAAAACATCCGAAGCAGT

Downstream 100 bases:

>100_bases
TAACAGATTTATAACATATAATCAACAGAATACTTAATCAATATCAATGAAGAAATTATGGTAACACGAAGAGATTTCCT
GAAAACAATGACAATGGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MKDTILTARRKKTELITLFLCFIIANLVNLYSIFTYNTPLTEMITSFFYVLIFSVALYIIWSLLRILFYGITALFKKKKE

Sequences:

>Translated_80_residues
MKDTILTARRKKTELITLFLCFIIANLVNLYSIFTYNTPLTEMITSFFYVLIFSVALYIIWSLLRILFYGITALFKKKKE
>Mature_80_residues
MKDTILTARRKKTELITLFLCFIIANLVNLYSIFTYNTPLTEMITSFFYVLIFSVALYIIWSLLRILFYGITALFKKKKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9484; Mature: 9484

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDTILTARRKKTELITLFLCFIIANLVNLYSIFTYNTPLTEMITSFFYVLIFSVALYII
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
WSLLRILFYGITALFKKKKE
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKDTILTARRKKTELITLFLCFIIANLVNLYSIFTYNTPLTEMITSFFYVLIFSVALYII
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
WSLLRILFYGITALFKKKKE
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA