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The map label for this gene is apbE [C]

Identifier: 29348877

GI number: 29348877

Start: 4466853

End: 4467716

Strand: Reverse

Name: apbE [C]

Synonym: BT_3468

Alternate gene names: 29348877

Gene position: 4467716-4466853 (Counterclockwise)

Preceding gene: 29348878

Following gene: 29348875

Centisome position: 71.37

GC content: 38.77

Gene sequence:

>864_bases
ATGCAGCATACAATTCAACACTTATACAAGACACATGGTGATGACGGTTTGCTTTATGCTTGGTTTTTATCCATGCATAC
ACGCGTAGATATAATACTCTGCTGCCAGAAATCAGAAAATGAATTAATGCTTGTAGTTAATAGTATATATGACACTCTCC
GACAACTGGAAAGAATTGCAAATTATTATGACCCTTCCAGTGAATTATCGCAAGTCAATCAAAGAGCTTCCACAGCTCCT
GTTATGATCAGTCAGTCTCTTTACAGGATGATTTCATTGTGCACAGAATATCATAAAAAAACCTTAGGATGTTTCGATGT
TACTATCCACTCAGATAATTATAATCAAGATACCATACACTCCATTCATTTATACCCCGAAGCACAGAGTGTCTTCTTTC
AACAAGCAGGTACTACAATAAACCTTTCCGGATTTCTTAAAGGTTATGCTCTCGACAAAATAAGAGAAATATTAAAGGTT
CACATCATAGCAAATGCCTTAATAAATATGGGAAACAGTTCTGTACTCGCTCTAGGCAATCATCCGGTTGGCACAGGATG
GAAAGTCAGCTTTGACGATCAGGCAAGTACTACAAAAAACCATAAAACTCAATCCATACTCCTTAATAACGAATGTTTAA
CCACCTCCGGAAACAACTCGGATGATCGCAAACACATTATCTCTCCTTCAAGTGGCAAACCACTGGAAGGAGTAAGACAA
GTGACAGTAGTAACGGATGATGGAACCACCGGTGAGATTCTCTCAACCAGCCTGTTCGTAGCAAATCAAAAACAGCGCGA
GTTAATAATGAGCGAGTTTCTCCCCAAAAGAGTTATTGATTTGGAACTGTGCCAGATGGTTTAG

Upstream 100 bases:

>100_bases
CTGAAATAACTTGCACTGAAAAGCCGATTTCTAACATAAAATCAAGAGTAGAAGGGCATGCACAAAGTGGCATGCCCTCT
TAATATTTCAATAAAACAAA

Downstream 100 bases:

>100_bases
GTAACGGAGTATTCACCGGTAAAGGGACTCCCAAATCCGGCATTCCATCAGCATCCCATCCTATCTTCTGCAATCGTGGA
TTGCGACTTTCCGACTCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: ApbE Family Protein; Thiamine Biosynthesis Lipoprotein ApbE; Thiamine Biosynthesis Lipoprotein; Thiamine Biosynthesis Protein ApbE; Thiamin Biosynthesis Lipoprotein; ApbE Family; Membrane-Associated Lipoprotein; Iron-Sulfur Cluster Assembly/Repair Protein; Thiamine Biosynthesis Protein

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MQHTIQHLYKTHGDDGLLYAWFLSMHTRVDIILCCQKSENELMLVVNSIYDTLRQLERIANYYDPSSELSQVNQRASTAP
VMISQSLYRMISLCTEYHKKTLGCFDVTIHSDNYNQDTIHSIHLYPEAQSVFFQQAGTTINLSGFLKGYALDKIREILKV
HIIANALINMGNSSVLALGNHPVGTGWKVSFDDQASTTKNHKTQSILLNNECLTTSGNNSDDRKHIISPSSGKPLEGVRQ
VTVVTDDGTTGEILSTSLFVANQKQRELIMSEFLPKRVIDLELCQMV

Sequences:

>Translated_287_residues
MQHTIQHLYKTHGDDGLLYAWFLSMHTRVDIILCCQKSENELMLVVNSIYDTLRQLERIANYYDPSSELSQVNQRASTAP
VMISQSLYRMISLCTEYHKKTLGCFDVTIHSDNYNQDTIHSIHLYPEAQSVFFQQAGTTINLSGFLKGYALDKIREILKV
HIIANALINMGNSSVLALGNHPVGTGWKVSFDDQASTTKNHKTQSILLNNECLTTSGNNSDDRKHIISPSSGKPLEGVRQ
VTVVTDDGTTGEILSTSLFVANQKQRELIMSEFLPKRVIDLELCQMV
>Mature_287_residues
MQHTIQHLYKTHGDDGLLYAWFLSMHTRVDIILCCQKSENELMLVVNSIYDTLRQLERIANYYDPSSELSQVNQRASTAP
VMISQSLYRMISLCTEYHKKTLGCFDVTIHSDNYNQDTIHSIHLYPEAQSVFFQQAGTTINLSGFLKGYALDKIREILKV
HIIANALINMGNSSVLALGNHPVGTGWKVSFDDQASTTKNHKTQSILLNNECLTTSGNNSDDRKHIISPSSGKPLEGVRQ
VTVVTDDGTTGEILSTSLFVANQKQRELIMSEFLPKRVIDLELCQMV

Specific function: Involved In The Conversion Of Aminoimidazole Ribotide (Air), A Purine Intermediate, To The 4-Amino-5-Hydroxymethyl-2- Methyl Pyrimidine (Hmp) Moiety Of Thiamine (By Similarity). [C]

COG id: COG1477

COG function: function code H; Membrane-associated lipoprotein involved in thiamine biosynthesis

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32254; Mature: 32254

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHTIQHLYKTHGDDGLLYAWFLSMHTRVDIILCCQKSENELMLVVNSIYDTLRQLERIA
CCHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHH
NYYDPSSELSQVNQRASTAPVMISQSLYRMISLCTEYHKKTLGCFDVTIHSDNYNQDTIH
HHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCEE
SIHLYPEAQSVFFQQAGTTINLSGFLKGYALDKIREILKVHIIANALINMGNSSVLALGN
EEEECCCHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC
HPVGTGWKVSFDDQASTTKNHKTQSILLNNECLTTSGNNSDDRKHIISPSSGKPLEGVRQ
CCCCCCEEEEECCCCCCCCCCCCEEEEEECCEEECCCCCCCCCCEEECCCCCCCCCCCEE
VTVVTDDGTTGEILSTSLFVANQKQRELIMSEFLPKRVIDLELCQMV
EEEEECCCCCCHHHHHHHEECCCHHHHHHHHHHCHHHHHHHHHHHCC
>Mature Secondary Structure
MQHTIQHLYKTHGDDGLLYAWFLSMHTRVDIILCCQKSENELMLVVNSIYDTLRQLERIA
CCHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHH
NYYDPSSELSQVNQRASTAPVMISQSLYRMISLCTEYHKKTLGCFDVTIHSDNYNQDTIH
HHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCEE
SIHLYPEAQSVFFQQAGTTINLSGFLKGYALDKIREILKVHIIANALINMGNSSVLALGN
EEEECCCHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC
HPVGTGWKVSFDDQASTTKNHKTQSILLNNECLTTSGNNSDDRKHIISPSSGKPLEGVRQ
CCCCCCEEEEECCCCCCCCCCCCEEEEEECCEEECCCCCCCCCCEEECCCCCCCCCCCEE
VTVVTDDGTTGEILSTSLFVANQKQRELIMSEFLPKRVIDLELCQMV
EEEEECCCCCCHHHHHHHEECCCHHHHHHHHHHCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA