Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

Click here to switch to the map view.

The map label for this gene is 29348841

Identifier: 29348841

GI number: 29348841

Start: 4422183

End: 4423922

Strand: Reverse

Name: 29348841

Synonym: BT_3432

Alternate gene names: NA

Gene position: 4423922-4422183 (Counterclockwise)

Preceding gene: 29348844

Following gene: 29348839

Centisome position: 70.67

GC content: 41.03

Gene sequence:

>1740_bases
ATGGATGCAGCAATAAAGAAAATACCTTATGGGATGACGGACTTCGAGAGAATAATTCTTGAAAACTATTACTATGTAGA
CAAAACACAATATATCGCCAAAGTAGAAAAAGTGACCTCCTTCTTCTTCTTTGTCCGTCCTCGACGTTTCGGAAAAAGCC
TTTTCCTAAACATGCTCGGTTTATACTACGACATCAACCAAAAAGATAAATTCGAGAAAATCTTTGGTAATCTTTATATA
GGCAAGCATCCTACGCCTGATCGCAACAAATATCTGGTGCTTACACTCAATTTCAGTAGTGTAGCCGCCAATATGGATCG
TTTGGAAGAAACATTCAACACCTATTGCAAAATCGTAATGGATGGATTTGCAGAACGAAACGCTCATCTGTTAGGGAAAG
AAGCCGTTGAAAAGCTACATGAATTAAAAACAGGAGATGCCTTATTGGGATCACTGTGCCAAAGCGCCCAAAACAAGGGA
CAAAAGATATATCTTATCCTTGATGAGTACGATAACTTTGCCAACAATATTCTGGTAGATTATGGTAATAAACGTTATCG
CAGCATCACTCATGGCAGCGGATTCTTCCGTAGTTTCCTTAAAGTGGTAAAAGACTATTCAAGTTCAGTGATCGAGCGCA
TCTTCCTTACAGGCGTAAGCCCCGTAACAATGGACGATCTCACTAGCGGATTCAACATTGCGGATAATTATAGCAGTTCA
CCTATCTTTAATAATATGATGGGATTTAATGAACAAGAAGTACGCACTCTGATCGATTATTACAAAAGTTACCGGGAACT
ACCGCACACTACAGATGAACTAATAACCATCATGAAACCATGGTACGACAATTACTGTTTCGCCATGAAAGCACTAAAGG
AACCGTCTATGTACAATTCAGATATGGTGCTCTATTTCATGAATCATTATATGCTGAATGAAGACATCCCTGACAATATG
CTCGATGCTAATATTCGCACCGACTACAACAAGCTGCGCCACCTCATCCACGTAGACAAAACTTTCGGTGAAAATGCAAG
CGTTGTACAAGAGATTGTTGAAAAAGGTTCTACTACCGGAATCATTGCAAACAGTTTCCCAGCCGAAGACATTATCAAAC
CGGAAAACTTTAAAAGCCTACTCTACTATTACGGCATGCTAACCATCAGCGGAATGGAAATGGGTGAGCCCATACTGAGC
GTCCCCAACTGGGCAGTGCGCGAACAACTTTACGGTTACATGGCAGACATCTACAAAGATTCCGCCGACCTATATCTGGA
GACAGATAAGCTGGTGGACCGAATGAAACGAATGGCATACAAAGGAGAATGGGAAAATTGCTTCACATACATTGCCGACC
GCTTGAATGCCCAAAGCAGTGTTCGCGACTTCATAGAAGGTGAAGCTTATGTAAAAACCTTTATTTTGGCTTACCTCGGA
TTGACACATTATTATATTGCCCGTCCCGAATATGAAAGCAACAAAGGATATGCGGATATCTTTCTGCAACCTCGTCTGCT
GCAACTTCCCGACATGGTATACAGCTACTGTATCGAAGTGAAATATGCAAAACGGGATGCTTCTGACACCGAGATAGAGA
AATTGCTGTCCAATGCAAAAATACAACTGAAACAGTATGCAGCAAGCGAATGGATTCATCAAGACAAAGGGACTACAGAA
TTAAAGAGTATCGCATTAGTATTCCAAGGCTGGAAACTGGTGAGAGTGGAAGAAGTATAA

Upstream 100 bases:

>100_bases
TAATACATATTTTTAGAAGAGAGTTATTATCACCCCTGTTTAGTTGCCACATAAAGGAAAATAAACTATTTTTGTTCTCA
ACATTAAAGAGGGAGCAATT

Downstream 100 bases:

>100_bases
ACTGCTAATCAAACAATTCTTTCAGTACATCCAGCGACTTTAATGCAGGAAAATCCGGCAGATGCAAACGATAATAATCA
TTCATAATCGTCAGGCAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 579; Mature: 579

Protein sequence:

>579_residues
MDAAIKKIPYGMTDFERIILENYYYVDKTQYIAKVEKVTSFFFFVRPRRFGKSLFLNMLGLYYDINQKDKFEKIFGNLYI
GKHPTPDRNKYLVLTLNFSSVAANMDRLEETFNTYCKIVMDGFAERNAHLLGKEAVEKLHELKTGDALLGSLCQSAQNKG
QKIYLILDEYDNFANNILVDYGNKRYRSITHGSGFFRSFLKVVKDYSSSVIERIFLTGVSPVTMDDLTSGFNIADNYSSS
PIFNNMMGFNEQEVRTLIDYYKSYRELPHTTDELITIMKPWYDNYCFAMKALKEPSMYNSDMVLYFMNHYMLNEDIPDNM
LDANIRTDYNKLRHLIHVDKTFGENASVVQEIVEKGSTTGIIANSFPAEDIIKPENFKSLLYYYGMLTISGMEMGEPILS
VPNWAVREQLYGYMADIYKDSADLYLETDKLVDRMKRMAYKGEWENCFTYIADRLNAQSSVRDFIEGEAYVKTFILAYLG
LTHYYIARPEYESNKGYADIFLQPRLLQLPDMVYSYCIEVKYAKRDASDTEIEKLLSNAKIQLKQYAASEWIHQDKGTTE
LKSIALVFQGWKLVRVEEV

Sequences:

>Translated_579_residues
MDAAIKKIPYGMTDFERIILENYYYVDKTQYIAKVEKVTSFFFFVRPRRFGKSLFLNMLGLYYDINQKDKFEKIFGNLYI
GKHPTPDRNKYLVLTLNFSSVAANMDRLEETFNTYCKIVMDGFAERNAHLLGKEAVEKLHELKTGDALLGSLCQSAQNKG
QKIYLILDEYDNFANNILVDYGNKRYRSITHGSGFFRSFLKVVKDYSSSVIERIFLTGVSPVTMDDLTSGFNIADNYSSS
PIFNNMMGFNEQEVRTLIDYYKSYRELPHTTDELITIMKPWYDNYCFAMKALKEPSMYNSDMVLYFMNHYMLNEDIPDNM
LDANIRTDYNKLRHLIHVDKTFGENASVVQEIVEKGSTTGIIANSFPAEDIIKPENFKSLLYYYGMLTISGMEMGEPILS
VPNWAVREQLYGYMADIYKDSADLYLETDKLVDRMKRMAYKGEWENCFTYIADRLNAQSSVRDFIEGEAYVKTFILAYLG
LTHYYIARPEYESNKGYADIFLQPRLLQLPDMVYSYCIEVKYAKRDASDTEIEKLLSNAKIQLKQYAASEWIHQDKGTTE
LKSIALVFQGWKLVRVEEV
>Mature_579_residues
MDAAIKKIPYGMTDFERIILENYYYVDKTQYIAKVEKVTSFFFFVRPRRFGKSLFLNMLGLYYDINQKDKFEKIFGNLYI
GKHPTPDRNKYLVLTLNFSSVAANMDRLEETFNTYCKIVMDGFAERNAHLLGKEAVEKLHELKTGDALLGSLCQSAQNKG
QKIYLILDEYDNFANNILVDYGNKRYRSITHGSGFFRSFLKVVKDYSSSVIERIFLTGVSPVTMDDLTSGFNIADNYSSS
PIFNNMMGFNEQEVRTLIDYYKSYRELPHTTDELITIMKPWYDNYCFAMKALKEPSMYNSDMVLYFMNHYMLNEDIPDNM
LDANIRTDYNKLRHLIHVDKTFGENASVVQEIVEKGSTTGIIANSFPAEDIIKPENFKSLLYYYGMLTISGMEMGEPILS
VPNWAVREQLYGYMADIYKDSADLYLETDKLVDRMKRMAYKGEWENCFTYIADRLNAQSSVRDFIEGEAYVKTFILAYLG
LTHYYIARPEYESNKGYADIFLQPRLLQLPDMVYSYCIEVKYAKRDASDTEIEKLLSNAKIQLKQYAASEWIHQDKGTTE
LKSIALVFQGWKLVRVEEV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018631
- InterPro:   IPR012547 [H]

Pfam domain/function: PF09820 AAA-ATPase_like; PF08011 DUF1703 [H]

EC number: NA

Molecular weight: Translated: 67342; Mature: 67342

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAAIKKIPYGMTDFERIILENYYYVDKTQYIAKVEKVTSFFFFVRPRRFGKSLFLNMLG
CCCHHHHCCCCCHHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
LYYDINQKDKFEKIFGNLYIGKHPTPDRNKYLVLTLNFSSVAANMDRLEETFNTYCKIVM
HHEECCCCHHHHHHHCCEEECCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
DGFAERNAHLLGKEAVEKLHELKTGDALLGSLCQSAQNKGQKIYLILDEYDNFANNILVD
HHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEE
YGNKRYRSITHGSGFFRSFLKVVKDYSSSVIERIFLTGVSPVTMDDLTSGFNIADNYSSS
CCCCHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCC
PIFNNMMGFNEQEVRTLIDYYKSYRELPHTTDELITIMKPWYDNYCFAMKALKEPSMYNS
CHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHCCCCCCCC
DMVLYFMNHYMLNEDIPDNMLDANIRTDYNKLRHLIHVDKTFGENASVVQEIVEKGSTTG
CHHEEEHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCE
IIANSFPAEDIIKPENFKSLLYYYGMLTISGMEMGEPILSVPNWAVREQLYGYMADIYKD
EEECCCCHHHCCCCCHHHHHHHHHHHHHCCCHHHCCCHHCCCCHHHHHHHHHHHHHHHCC
SADLYLETDKLVDRMKRMAYKGEWENCFTYIADRLNAQSSVRDFIEGEAYVKTFILAYLG
CCCEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHH
LTHYYIARPEYESNKGYADIFLQPRLLQLPDMVYSYCIEVKYAKRDASDTEIEKLLSNAK
HHHHEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCH
IQLKQYAASEWIHQDKGTTELKSIALVFQGWKLVRVEEV
HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEECC
>Mature Secondary Structure
MDAAIKKIPYGMTDFERIILENYYYVDKTQYIAKVEKVTSFFFFVRPRRFGKSLFLNMLG
CCCHHHHCCCCCHHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
LYYDINQKDKFEKIFGNLYIGKHPTPDRNKYLVLTLNFSSVAANMDRLEETFNTYCKIVM
HHEECCCCHHHHHHHCCEEECCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
DGFAERNAHLLGKEAVEKLHELKTGDALLGSLCQSAQNKGQKIYLILDEYDNFANNILVD
HHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEE
YGNKRYRSITHGSGFFRSFLKVVKDYSSSVIERIFLTGVSPVTMDDLTSGFNIADNYSSS
CCCCHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCC
PIFNNMMGFNEQEVRTLIDYYKSYRELPHTTDELITIMKPWYDNYCFAMKALKEPSMYNS
CHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHCCCCCCCC
DMVLYFMNHYMLNEDIPDNMLDANIRTDYNKLRHLIHVDKTFGENASVVQEIVEKGSTTG
CHHEEEHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCE
IIANSFPAEDIIKPENFKSLLYYYGMLTISGMEMGEPILSVPNWAVREQLYGYMADIYKD
EEECCCCHHHCCCCCHHHHHHHHHHHHHCCCHHHCCCHHCCCCHHHHHHHHHHHHHHHCC
SADLYLETDKLVDRMKRMAYKGEWENCFTYIADRLNAQSSVRDFIEGEAYVKTFILAYLG
CCCEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHH
LTHYYIARPEYESNKGYADIFLQPRLLQLPDMVYSYCIEVKYAKRDASDTEIEKLLSNAK
HHHHEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCH
IQLKQYAASEWIHQDKGTTELKSIALVFQGWKLVRVEEV
HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2388847 [H]