| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348841
Identifier: 29348841
GI number: 29348841
Start: 4422183
End: 4423922
Strand: Reverse
Name: 29348841
Synonym: BT_3432
Alternate gene names: NA
Gene position: 4423922-4422183 (Counterclockwise)
Preceding gene: 29348844
Following gene: 29348839
Centisome position: 70.67
GC content: 41.03
Gene sequence:
>1740_bases ATGGATGCAGCAATAAAGAAAATACCTTATGGGATGACGGACTTCGAGAGAATAATTCTTGAAAACTATTACTATGTAGA CAAAACACAATATATCGCCAAAGTAGAAAAAGTGACCTCCTTCTTCTTCTTTGTCCGTCCTCGACGTTTCGGAAAAAGCC TTTTCCTAAACATGCTCGGTTTATACTACGACATCAACCAAAAAGATAAATTCGAGAAAATCTTTGGTAATCTTTATATA GGCAAGCATCCTACGCCTGATCGCAACAAATATCTGGTGCTTACACTCAATTTCAGTAGTGTAGCCGCCAATATGGATCG TTTGGAAGAAACATTCAACACCTATTGCAAAATCGTAATGGATGGATTTGCAGAACGAAACGCTCATCTGTTAGGGAAAG AAGCCGTTGAAAAGCTACATGAATTAAAAACAGGAGATGCCTTATTGGGATCACTGTGCCAAAGCGCCCAAAACAAGGGA CAAAAGATATATCTTATCCTTGATGAGTACGATAACTTTGCCAACAATATTCTGGTAGATTATGGTAATAAACGTTATCG CAGCATCACTCATGGCAGCGGATTCTTCCGTAGTTTCCTTAAAGTGGTAAAAGACTATTCAAGTTCAGTGATCGAGCGCA TCTTCCTTACAGGCGTAAGCCCCGTAACAATGGACGATCTCACTAGCGGATTCAACATTGCGGATAATTATAGCAGTTCA CCTATCTTTAATAATATGATGGGATTTAATGAACAAGAAGTACGCACTCTGATCGATTATTACAAAAGTTACCGGGAACT ACCGCACACTACAGATGAACTAATAACCATCATGAAACCATGGTACGACAATTACTGTTTCGCCATGAAAGCACTAAAGG AACCGTCTATGTACAATTCAGATATGGTGCTCTATTTCATGAATCATTATATGCTGAATGAAGACATCCCTGACAATATG CTCGATGCTAATATTCGCACCGACTACAACAAGCTGCGCCACCTCATCCACGTAGACAAAACTTTCGGTGAAAATGCAAG CGTTGTACAAGAGATTGTTGAAAAAGGTTCTACTACCGGAATCATTGCAAACAGTTTCCCAGCCGAAGACATTATCAAAC CGGAAAACTTTAAAAGCCTACTCTACTATTACGGCATGCTAACCATCAGCGGAATGGAAATGGGTGAGCCCATACTGAGC GTCCCCAACTGGGCAGTGCGCGAACAACTTTACGGTTACATGGCAGACATCTACAAAGATTCCGCCGACCTATATCTGGA GACAGATAAGCTGGTGGACCGAATGAAACGAATGGCATACAAAGGAGAATGGGAAAATTGCTTCACATACATTGCCGACC GCTTGAATGCCCAAAGCAGTGTTCGCGACTTCATAGAAGGTGAAGCTTATGTAAAAACCTTTATTTTGGCTTACCTCGGA TTGACACATTATTATATTGCCCGTCCCGAATATGAAAGCAACAAAGGATATGCGGATATCTTTCTGCAACCTCGTCTGCT GCAACTTCCCGACATGGTATACAGCTACTGTATCGAAGTGAAATATGCAAAACGGGATGCTTCTGACACCGAGATAGAGA AATTGCTGTCCAATGCAAAAATACAACTGAAACAGTATGCAGCAAGCGAATGGATTCATCAAGACAAAGGGACTACAGAA TTAAAGAGTATCGCATTAGTATTCCAAGGCTGGAAACTGGTGAGAGTGGAAGAAGTATAA
Upstream 100 bases:
>100_bases TAATACATATTTTTAGAAGAGAGTTATTATCACCCCTGTTTAGTTGCCACATAAAGGAAAATAAACTATTTTTGTTCTCA ACATTAAAGAGGGAGCAATT
Downstream 100 bases:
>100_bases ACTGCTAATCAAACAATTCTTTCAGTACATCCAGCGACTTTAATGCAGGAAAATCCGGCAGATGCAAACGATAATAATCA TTCATAATCGTCAGGCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 579; Mature: 579
Protein sequence:
>579_residues MDAAIKKIPYGMTDFERIILENYYYVDKTQYIAKVEKVTSFFFFVRPRRFGKSLFLNMLGLYYDINQKDKFEKIFGNLYI GKHPTPDRNKYLVLTLNFSSVAANMDRLEETFNTYCKIVMDGFAERNAHLLGKEAVEKLHELKTGDALLGSLCQSAQNKG QKIYLILDEYDNFANNILVDYGNKRYRSITHGSGFFRSFLKVVKDYSSSVIERIFLTGVSPVTMDDLTSGFNIADNYSSS PIFNNMMGFNEQEVRTLIDYYKSYRELPHTTDELITIMKPWYDNYCFAMKALKEPSMYNSDMVLYFMNHYMLNEDIPDNM LDANIRTDYNKLRHLIHVDKTFGENASVVQEIVEKGSTTGIIANSFPAEDIIKPENFKSLLYYYGMLTISGMEMGEPILS VPNWAVREQLYGYMADIYKDSADLYLETDKLVDRMKRMAYKGEWENCFTYIADRLNAQSSVRDFIEGEAYVKTFILAYLG LTHYYIARPEYESNKGYADIFLQPRLLQLPDMVYSYCIEVKYAKRDASDTEIEKLLSNAKIQLKQYAASEWIHQDKGTTE LKSIALVFQGWKLVRVEEV
Sequences:
>Translated_579_residues MDAAIKKIPYGMTDFERIILENYYYVDKTQYIAKVEKVTSFFFFVRPRRFGKSLFLNMLGLYYDINQKDKFEKIFGNLYI GKHPTPDRNKYLVLTLNFSSVAANMDRLEETFNTYCKIVMDGFAERNAHLLGKEAVEKLHELKTGDALLGSLCQSAQNKG QKIYLILDEYDNFANNILVDYGNKRYRSITHGSGFFRSFLKVVKDYSSSVIERIFLTGVSPVTMDDLTSGFNIADNYSSS PIFNNMMGFNEQEVRTLIDYYKSYRELPHTTDELITIMKPWYDNYCFAMKALKEPSMYNSDMVLYFMNHYMLNEDIPDNM LDANIRTDYNKLRHLIHVDKTFGENASVVQEIVEKGSTTGIIANSFPAEDIIKPENFKSLLYYYGMLTISGMEMGEPILS VPNWAVREQLYGYMADIYKDSADLYLETDKLVDRMKRMAYKGEWENCFTYIADRLNAQSSVRDFIEGEAYVKTFILAYLG LTHYYIARPEYESNKGYADIFLQPRLLQLPDMVYSYCIEVKYAKRDASDTEIEKLLSNAKIQLKQYAASEWIHQDKGTTE LKSIALVFQGWKLVRVEEV >Mature_579_residues MDAAIKKIPYGMTDFERIILENYYYVDKTQYIAKVEKVTSFFFFVRPRRFGKSLFLNMLGLYYDINQKDKFEKIFGNLYI GKHPTPDRNKYLVLTLNFSSVAANMDRLEETFNTYCKIVMDGFAERNAHLLGKEAVEKLHELKTGDALLGSLCQSAQNKG QKIYLILDEYDNFANNILVDYGNKRYRSITHGSGFFRSFLKVVKDYSSSVIERIFLTGVSPVTMDDLTSGFNIADNYSSS PIFNNMMGFNEQEVRTLIDYYKSYRELPHTTDELITIMKPWYDNYCFAMKALKEPSMYNSDMVLYFMNHYMLNEDIPDNM LDANIRTDYNKLRHLIHVDKTFGENASVVQEIVEKGSTTGIIANSFPAEDIIKPENFKSLLYYYGMLTISGMEMGEPILS VPNWAVREQLYGYMADIYKDSADLYLETDKLVDRMKRMAYKGEWENCFTYIADRLNAQSSVRDFIEGEAYVKTFILAYLG LTHYYIARPEYESNKGYADIFLQPRLLQLPDMVYSYCIEVKYAKRDASDTEIEKLLSNAKIQLKQYAASEWIHQDKGTTE LKSIALVFQGWKLVRVEEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018631 - InterPro: IPR012547 [H]
Pfam domain/function: PF09820 AAA-ATPase_like; PF08011 DUF1703 [H]
EC number: NA
Molecular weight: Translated: 67342; Mature: 67342
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAAIKKIPYGMTDFERIILENYYYVDKTQYIAKVEKVTSFFFFVRPRRFGKSLFLNMLG CCCHHHHCCCCCHHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH LYYDINQKDKFEKIFGNLYIGKHPTPDRNKYLVLTLNFSSVAANMDRLEETFNTYCKIVM HHEECCCCHHHHHHHCCEEECCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH DGFAERNAHLLGKEAVEKLHELKTGDALLGSLCQSAQNKGQKIYLILDEYDNFANNILVD HHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEE YGNKRYRSITHGSGFFRSFLKVVKDYSSSVIERIFLTGVSPVTMDDLTSGFNIADNYSSS CCCCHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCC PIFNNMMGFNEQEVRTLIDYYKSYRELPHTTDELITIMKPWYDNYCFAMKALKEPSMYNS CHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHCCCCCCCC DMVLYFMNHYMLNEDIPDNMLDANIRTDYNKLRHLIHVDKTFGENASVVQEIVEKGSTTG CHHEEEHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCE IIANSFPAEDIIKPENFKSLLYYYGMLTISGMEMGEPILSVPNWAVREQLYGYMADIYKD EEECCCCHHHCCCCCHHHHHHHHHHHHHCCCHHHCCCHHCCCCHHHHHHHHHHHHHHHCC SADLYLETDKLVDRMKRMAYKGEWENCFTYIADRLNAQSSVRDFIEGEAYVKTFILAYLG CCCEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHH LTHYYIARPEYESNKGYADIFLQPRLLQLPDMVYSYCIEVKYAKRDASDTEIEKLLSNAK HHHHEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCH IQLKQYAASEWIHQDKGTTELKSIALVFQGWKLVRVEEV HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEECC >Mature Secondary Structure MDAAIKKIPYGMTDFERIILENYYYVDKTQYIAKVEKVTSFFFFVRPRRFGKSLFLNMLG CCCHHHHCCCCCHHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH LYYDINQKDKFEKIFGNLYIGKHPTPDRNKYLVLTLNFSSVAANMDRLEETFNTYCKIVM HHEECCCCHHHHHHHCCEEECCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH DGFAERNAHLLGKEAVEKLHELKTGDALLGSLCQSAQNKGQKIYLILDEYDNFANNILVD HHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEE YGNKRYRSITHGSGFFRSFLKVVKDYSSSVIERIFLTGVSPVTMDDLTSGFNIADNYSSS CCCCHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCC PIFNNMMGFNEQEVRTLIDYYKSYRELPHTTDELITIMKPWYDNYCFAMKALKEPSMYNS CHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHCCCCCCCC DMVLYFMNHYMLNEDIPDNMLDANIRTDYNKLRHLIHVDKTFGENASVVQEIVEKGSTTG CHHEEEHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCE IIANSFPAEDIIKPENFKSLLYYYGMLTISGMEMGEPILSVPNWAVREQLYGYMADIYKD EEECCCCHHHCCCCCHHHHHHHHHHHHHCCCHHHCCCHHCCCCHHHHHHHHHHHHHHHCC SADLYLETDKLVDRMKRMAYKGEWENCFTYIADRLNAQSSVRDFIEGEAYVKTFILAYLG CCCEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHH LTHYYIARPEYESNKGYADIFLQPRLLQLPDMVYSYCIEVKYAKRDASDTEIEKLLSNAK HHHHEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCH IQLKQYAASEWIHQDKGTTELKSIALVFQGWKLVRVEEV HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2388847 [H]