| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348827
Identifier: 29348827
GI number: 29348827
Start: 4401633
End: 4404104
Strand: Reverse
Name: 29348827
Synonym: BT_3418
Alternate gene names: NA
Gene position: 4404104-4401633 (Counterclockwise)
Preceding gene: 29348837
Following gene: 29348826
Centisome position: 70.35
GC content: 48.38
Gene sequence:
>2472_bases ATGAAAACGATTCTACTCTGCATGATGCTCATGCTGTCGGGTATGCTCACAGCACAAACCGTCGACAATCCGCCATTCAA AGCCCGTTCGGGAAGTATTGGCAATATCACCCGTATAGAACGCACGCCCGATGGCACGCGTGTTTATATTCACGCCATCT TCCGTCCGCACTGGTGGATAAAGGAAGAAGGAGACAGTTATCTGGAAGATGCAGCCACCGGCAAGAAATACCAGTTCAAG AGTGCGGAAGGCATTGAGCTCAATAAGGAAGTGTATATGCCCGATTCGGGCGAGATGGACTATGTGCTCGTTTTCGAAGC TCTGCCGGAAGAGACGCAGGTCATCCATCTCCTCAGTCCGAGCGATACGGAAGGAAATACGTATGACATATCTTTAGTAC CGTCCTCCGGCAAAAACGTTTCGCCGTTGGCGGCAATCAAGGGAAACTGGTTCAAGGCAGATGATTTAAACGCCTGGGAA TACGGTATCTACGATTCTGTTACGATTATGGACAACCGGATATTTACCAACGAAAACATCCGCAAGAAAGGGAAGCGGGT GGAAATCACCGTCAAGGACAAGCGGAATGGAGACATACGCACCCTGCTGGTCACCCCGCAGAAAGACGGAAGCTGTCAGA TACAAGTGAACGGAGAAAAGAATCAGCTGTATACCCGGCAAAGGGGAGCTACAAAGACAATCGCTGCCGACACAGGTTTC CAGCAGTTCTTCCACACAGACACCACCTGTCTGCAAGGGTATATAGACGGCTACGACCGCCGGCTGGGATTCGACACCGG ACTCATCTATCTATCCAACCATATCACCCGCCAGGACTACCCGACTGTGATTCAGATAGACGAAGACGGCAGCTTCCTGT GCAAGTTTGTCATCAAGCATCCTGTGGAACAGTCGGTCACGCTTGACAACAACTGGATTCCATTCTATATCGAGCCCGGA CAGACGCTTACCATGTATATCGACTGGGAAGCATTGCTGGCACGCAGCCGTGCACGCGACTATTATTTCCCGATCAAGAA TACAGCCTACATGGGCCCGTCGGCTTCCCTCTCCTATCTGCTGAAAGAATTCAAGTCGCTGATCCCCTACCGTTACGATG ATTTATCCAACGCGCGCAACAAACTGACTCCCAGCCAATATCAGGAGCACATGAAGCCGATTGTCGCCCGATGGGAGCAT ACAGCCGATTCACTTATTCAGATTTGCCGCCCATCGGCAAAAGCTGCCCGTCTGATCAAGAATAAGGCAGACCTGCAGGC AGGAGGCTTATTCTTCGACTTTCTGATGAGCAGAGATTATTATGCGAAGCAGGATACAGCCAACCAAGCCTTGAAAGTGA AAGAAGAAGATTCTTATTACGACTTCTTGAAGAAGATGCCGCTGAATGATGAAACAGTGCTCGCCGATGCCAATGCCAGC TCTTTTATCAACCGGTTTGAATATATGGACGCCTTCAGAACAGCCTATAATTATCATGCACCGAAAGCAAAGGATACCAT CTCTTACACGTATCCGGAAGAATCGCTTCTCGCTTTTCTTAAAGAGAGAGGAGTAAAACTGAATGCAGAACAGGAGGCAA TCAGACTGAAACAGGAGAAACTGGCAGGAACAACCGTCAGAATCCCCTTAAAAGAACTTCAAGAAGAGAATGACAAGGTG ACAGGCTTATACGAAAAAGAAGAAAAACTAGTCCTGGAGTACATCGACAAGCAGTATAAAAACAAGCAGTCAGAGCAAGA CATGGACAGAAACTTTATCTCGATGGAACAAAAAACCGGTCATAAGAAAGACAGCATTCTTGCCCGGCTATATGATGTGC CCGATCCTTTGCTTTGGCAAATAGCCAAAGTCCGCAACCTGGGTTTCAGCCTGCAGAATATCAAGACACGTTCCATTGCC CGTGAGTATGTGGACAGCATCAAGCAAAAGCTCACTCACCCACAATTGGCAGAAGAGGCCGAATATCTGTTCGCCAAAAC GCATCCGAAGGAAAAAGTCAATTCCTATCAACTTCCGGAAGGCAAAGCCACCGACGTTTTCCGCAACATTATTAAGAATC ATCCGGGAAAAGTCCTGTTCGTCGACTTCTGGGCAACAACCTGCGGACCTTGTCGCGCAGGAATAGAAGCGACGGCAGAC CTGCGCAAAAAATACAAAGATCATCCGGAGTTCGAGTTCATCTATATCACCGGACAGAAAGACTCACCAGCCGGTGCATA TAAGCAATACGTGGAAAAGAATCTGAAAGGAGAAGCCAGCTATTATGTCACCGACTCAGAGTTCAATTATCTGCGCCAAC TTTTCCGCTTCAACGGCATTCCGCACTATGAACTTGTGCTAAAAGACGGCAGTATCTCCAAGGAAAAACTGGGGACGCAT AGAATCAGAAAGTATTTGGAGGAGCACTTCCCCGTTTCCGGGTCTGCCGGACAGGGAGAGAATGATCAGTAA
Upstream 100 bases:
>100_bases AATCTATGTTAAGTTAAAAGGGAAAAAGAGAGGGAGCTATGGATATTTTTCTTTCTTTGTATAAGGAACTACTAAATGCA TTTATTCAAAATTTAATATT
Downstream 100 bases:
>100_bases TCCCGACTGAGTCTGGTTGTGACACTTTGACAAGAATGCACATTAAGGATAAGATCAAAGGTCAGTAGCCACTTTCCCAA TTGAAAACCGGAGTGGTAGG
Product: putative thiol:disulfide interchange protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 823; Mature: 823
Protein sequence:
>823_residues MKTILLCMMLMLSGMLTAQTVDNPPFKARSGSIGNITRIERTPDGTRVYIHAIFRPHWWIKEEGDSYLEDAATGKKYQFK SAEGIELNKEVYMPDSGEMDYVLVFEALPEETQVIHLLSPSDTEGNTYDISLVPSSGKNVSPLAAIKGNWFKADDLNAWE YGIYDSVTIMDNRIFTNENIRKKGKRVEITVKDKRNGDIRTLLVTPQKDGSCQIQVNGEKNQLYTRQRGATKTIAADTGF QQFFHTDTTCLQGYIDGYDRRLGFDTGLIYLSNHITRQDYPTVIQIDEDGSFLCKFVIKHPVEQSVTLDNNWIPFYIEPG QTLTMYIDWEALLARSRARDYYFPIKNTAYMGPSASLSYLLKEFKSLIPYRYDDLSNARNKLTPSQYQEHMKPIVARWEH TADSLIQICRPSAKAARLIKNKADLQAGGLFFDFLMSRDYYAKQDTANQALKVKEEDSYYDFLKKMPLNDETVLADANAS SFINRFEYMDAFRTAYNYHAPKAKDTISYTYPEESLLAFLKERGVKLNAEQEAIRLKQEKLAGTTVRIPLKELQEENDKV TGLYEKEEKLVLEYIDKQYKNKQSEQDMDRNFISMEQKTGHKKDSILARLYDVPDPLLWQIAKVRNLGFSLQNIKTRSIA REYVDSIKQKLTHPQLAEEAEYLFAKTHPKEKVNSYQLPEGKATDVFRNIIKNHPGKVLFVDFWATTCGPCRAGIEATAD LRKKYKDHPEFEFIYITGQKDSPAGAYKQYVEKNLKGEASYYVTDSEFNYLRQLFRFNGIPHYELVLKDGSISKEKLGTH RIRKYLEEHFPVSGSAGQGENDQ
Sequences:
>Translated_823_residues MKTILLCMMLMLSGMLTAQTVDNPPFKARSGSIGNITRIERTPDGTRVYIHAIFRPHWWIKEEGDSYLEDAATGKKYQFK SAEGIELNKEVYMPDSGEMDYVLVFEALPEETQVIHLLSPSDTEGNTYDISLVPSSGKNVSPLAAIKGNWFKADDLNAWE YGIYDSVTIMDNRIFTNENIRKKGKRVEITVKDKRNGDIRTLLVTPQKDGSCQIQVNGEKNQLYTRQRGATKTIAADTGF QQFFHTDTTCLQGYIDGYDRRLGFDTGLIYLSNHITRQDYPTVIQIDEDGSFLCKFVIKHPVEQSVTLDNNWIPFYIEPG QTLTMYIDWEALLARSRARDYYFPIKNTAYMGPSASLSYLLKEFKSLIPYRYDDLSNARNKLTPSQYQEHMKPIVARWEH TADSLIQICRPSAKAARLIKNKADLQAGGLFFDFLMSRDYYAKQDTANQALKVKEEDSYYDFLKKMPLNDETVLADANAS SFINRFEYMDAFRTAYNYHAPKAKDTISYTYPEESLLAFLKERGVKLNAEQEAIRLKQEKLAGTTVRIPLKELQEENDKV TGLYEKEEKLVLEYIDKQYKNKQSEQDMDRNFISMEQKTGHKKDSILARLYDVPDPLLWQIAKVRNLGFSLQNIKTRSIA REYVDSIKQKLTHPQLAEEAEYLFAKTHPKEKVNSYQLPEGKATDVFRNIIKNHPGKVLFVDFWATTCGPCRAGIEATAD LRKKYKDHPEFEFIYITGQKDSPAGAYKQYVEKNLKGEASYYVTDSEFNYLRQLFRFNGIPHYELVLKDGSISKEKLGTH RIRKYLEEHFPVSGSAGQGENDQ >Mature_823_residues MKTILLCMMLMLSGMLTAQTVDNPPFKARSGSIGNITRIERTPDGTRVYIHAIFRPHWWIKEEGDSYLEDAATGKKYQFK SAEGIELNKEVYMPDSGEMDYVLVFEALPEETQVIHLLSPSDTEGNTYDISLVPSSGKNVSPLAAIKGNWFKADDLNAWE YGIYDSVTIMDNRIFTNENIRKKGKRVEITVKDKRNGDIRTLLVTPQKDGSCQIQVNGEKNQLYTRQRGATKTIAADTGF QQFFHTDTTCLQGYIDGYDRRLGFDTGLIYLSNHITRQDYPTVIQIDEDGSFLCKFVIKHPVEQSVTLDNNWIPFYIEPG QTLTMYIDWEALLARSRARDYYFPIKNTAYMGPSASLSYLLKEFKSLIPYRYDDLSNARNKLTPSQYQEHMKPIVARWEH TADSLIQICRPSAKAARLIKNKADLQAGGLFFDFLMSRDYYAKQDTANQALKVKEEDSYYDFLKKMPLNDETVLADANAS SFINRFEYMDAFRTAYNYHAPKAKDTISYTYPEESLLAFLKERGVKLNAEQEAIRLKQEKLAGTTVRIPLKELQEENDKV TGLYEKEEKLVLEYIDKQYKNKQSEQDMDRNFISMEQKTGHKKDSILARLYDVPDPLLWQIAKVRNLGFSLQNIKTRSIA REYVDSIKQKLTHPQLAEEAEYLFAKTHPKEKVNSYQLPEGKATDVFRNIIKNHPGKVLFVDFWATTCGPCRAGIEATAD LRKKYKDHPEFEFIYITGQKDSPAGAYKQYVEKNLKGEASYYVTDSEFNYLRQLFRFNGIPHYELVLKDGSISKEKLGTH RIRKYLEEHFPVSGSAGQGENDQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94705; Mature: 94705
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTILLCMMLMLSGMLTAQTVDNPPFKARSGSIGNITRIERTPDGTRVYIHAIFRPHWWI CHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCEEE KEEGDSYLEDAATGKKYQFKSAEGIELNKEVYMPDSGEMDYVLVFEALPEETQVIHLLSP ECCCCHHHHHHCCCCEEEECCCCCCEECCEEECCCCCCCCEEEEEECCCCCCEEEEEECC SDTEGNTYDISLVPSSGKNVSPLAAIKGNWFKADDLNAWEYGIYDSVTIMDNRIFTNENI CCCCCCEEEEEEECCCCCCCCCCCEECCCEEECCCCCCEECCCCCEEEEECCEEECCCCH RKKGKRVEITVKDKRNGDIRTLLVTPQKDGSCQIQVNGEKNQLYTRQRGATKTIAADTGF HHCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEECCCCCCEEHHHCCCCEEEECCCCH QQFFHTDTTCLQGYIDGYDRRLGFDTGLIYLSNHITRQDYPTVIQIDEDGSFLCKFVIKH HHHHCCCHHHHHHHHCCHHHHCCCCCCEEEEECCCCCCCCCCEEEECCCCCHHHHHHHHC PVEQSVTLDNNWIPFYIEPGQTLTMYIDWEALLARSRARDYYFPIKNTAYMGPSASLSYL CCCCCEEECCCEEEEEECCCCEEEEEEEHHHHHHHHHCCCEEECCCCCEECCCCHHHHHH LKEFKSLIPYRYDDLSNARNKLTPSQYQEHMKPIVARWEHTADSLIQICRPSAKAARLIK HHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH NKADLQAGGLFFDFLMSRDYYAKQDTANQALKVKEEDSYYDFLKKMPLNDETVLADANAS HHCCCCCCCHHHHHHHCCCCCCCCCCCCHHEEECCCCCHHHHHHHCCCCCCEEEECCCHH SFINRFEYMDAFRTAYNYHAPKAKDTISYTYPEESLLAFLKERGVKLNAEQEAIRLKQEK HHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHCCCEECCHHHHHHHHHHH LAGTTVRIPLKELQEENDKVTGLYEKEEKLVLEYIDKQYKNKQSEQDMDRNFISMEQKTG HCCCEEEECHHHHHCCCCCEECEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC HKKDSILARLYDVPDPLLWQIAKVRNLGFSLQNIKTRSIAREYVDSIKQKLTHPQLAEEA CCHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH EYLFAKTHPKEKVNSYQLPEGKATDVFRNIIKNHPGKVLFVDFWATTCGPCRAGIEATAD HHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHCCCHHHHH LRKKYKDHPEFEFIYITGQKDSPAGAYKQYVEKNLKGEASYYVTDSEFNYLRQLFRFNGI HHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCC PHYELVLKDGSISKEKLGTHRIRKYLEEHFPVSGSAGQGENDQ CCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MKTILLCMMLMLSGMLTAQTVDNPPFKARSGSIGNITRIERTPDGTRVYIHAIFRPHWWI CHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCEEE KEEGDSYLEDAATGKKYQFKSAEGIELNKEVYMPDSGEMDYVLVFEALPEETQVIHLLSP ECCCCHHHHHHCCCCEEEECCCCCCEECCEEECCCCCCCCEEEEEECCCCCCEEEEEECC SDTEGNTYDISLVPSSGKNVSPLAAIKGNWFKADDLNAWEYGIYDSVTIMDNRIFTNENI CCCCCCEEEEEEECCCCCCCCCCCEECCCEEECCCCCCEECCCCCEEEEECCEEECCCCH RKKGKRVEITVKDKRNGDIRTLLVTPQKDGSCQIQVNGEKNQLYTRQRGATKTIAADTGF HHCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEECCCCCCEEHHHCCCCEEEECCCCH QQFFHTDTTCLQGYIDGYDRRLGFDTGLIYLSNHITRQDYPTVIQIDEDGSFLCKFVIKH HHHHCCCHHHHHHHHCCHHHHCCCCCCEEEEECCCCCCCCCCEEEECCCCCHHHHHHHHC PVEQSVTLDNNWIPFYIEPGQTLTMYIDWEALLARSRARDYYFPIKNTAYMGPSASLSYL CCCCCEEECCCEEEEEECCCCEEEEEEEHHHHHHHHHCCCEEECCCCCEECCCCHHHHHH LKEFKSLIPYRYDDLSNARNKLTPSQYQEHMKPIVARWEHTADSLIQICRPSAKAARLIK HHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH NKADLQAGGLFFDFLMSRDYYAKQDTANQALKVKEEDSYYDFLKKMPLNDETVLADANAS HHCCCCCCCHHHHHHHCCCCCCCCCCCCHHEEECCCCCHHHHHHHCCCCCCEEEECCCHH SFINRFEYMDAFRTAYNYHAPKAKDTISYTYPEESLLAFLKERGVKLNAEQEAIRLKQEK HHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHCCCEECCHHHHHHHHHHH LAGTTVRIPLKELQEENDKVTGLYEKEEKLVLEYIDKQYKNKQSEQDMDRNFISMEQKTG HCCCEEEECHHHHHCCCCCEECEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC HKKDSILARLYDVPDPLLWQIAKVRNLGFSLQNIKTRSIAREYVDSIKQKLTHPQLAEEA CCHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH EYLFAKTHPKEKVNSYQLPEGKATDVFRNIIKNHPGKVLFVDFWATTCGPCRAGIEATAD HHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHCCCHHHHH LRKKYKDHPEFEFIYITGQKDSPAGAYKQYVEKNLKGEASYYVTDSEFNYLRQLFRFNGI HHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCC PHYELVLKDGSISKEKLGTHRIRKYLEEHFPVSGSAGQGENDQ CCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA