| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348807
Identifier: 29348807
GI number: 29348807
Start: 4377840
End: 4378625
Strand: Reverse
Name: 29348807
Synonym: BT_3398
Alternate gene names: NA
Gene position: 4378625-4377840 (Counterclockwise)
Preceding gene: 29348809
Following gene: 29348800
Centisome position: 69.94
GC content: 46.31
Gene sequence:
>786_bases ATGAAAAGAAACACATTGACTGCATGGCTGCTCGGAATAATTCTGATATTCTCCGCCACCTCCTGTTTTAATGGCCCTAT TGTGAAAGGCAGTAAAAACTACATCACCAAAAAAGAGAATCTGGAACATTTCAATGACATCAGCATGTCCGGAAGTGCCA ACATCATCTACCAGCAAGACTCCTCCTCCCGCATCGAGATTTACGGTTCGGACAATATCGTAGAACTCCTGGAAACAAAA GTAAACGGAAAAACATTGAATATAAAATTTAAAAAGAATGTCAATATCATCGACAAGGGCAAACTAGAGATCAAAGTTTT CTCACCGGACCTGAACGGACTGACACTCAACGGATCGGGTGGCATTCTCTTTGCGAACGGCATTCACACCGAGGGAGATC TTAAAGTAACGATTAACGGTTCGGGCAATTTAGGAGGAAGCACATTCGATACCGGACATCTGGCCATCTCAATTCATGGT TCGGGTGATGTCAGACTCAAACAAATCGACAGCAAAACCTGCTCTGCAAGCATTTCCGGATCGGGCAACATCACCCTTGA CGGCATGACAGGCGCAGCAAAGTACAACATATCAGGTTCCGGCAATATCAAAGCTGCCGACCTGGAAGCTACGGACGTAT ATGCAGGTATCTCGGGTTCGGGTAACATCAGCTGCTTCGTCAACGGCAAACTAGGCGGGCACGTCAGCGGAAGCGGCAAC GTCGCTTACAAAGGAAATCCTCAGGCTATTGATTTCCCTCACAAGAAGCTCCGCAAACTAGACTAA
Upstream 100 bases:
>100_bases AAAAAGAAGCCGGTGGCGAAAAAAGTGATATTCAATGCAACTTTATAGTAACTCGCAACGTCTAATCCATATAAACTCAT ATTAAAATCAACTATCAATT
Downstream 100 bases:
>100_bases ATCCATAAACATCCCAAAAACATAAAAGGGCTACTGCATCTCGCGGTAGCCCATTTATTTAGTTAGTTTCATTATAAAAA ATTTGAGAGAATTGAAAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MKRNTLTAWLLGIILIFSATSCFNGPIVKGSKNYITKKENLEHFNDISMSGSANIIYQQDSSSRIEIYGSDNIVELLETK VNGKTLNIKFKKNVNIIDKGKLEIKVFSPDLNGLTLNGSGGILFANGIHTEGDLKVTINGSGNLGGSTFDTGHLAISIHG SGDVRLKQIDSKTCSASISGSGNITLDGMTGAAKYNISGSGNIKAADLEATDVYAGISGSGNISCFVNGKLGGHVSGSGN VAYKGNPQAIDFPHKKLRKLD
Sequences:
>Translated_261_residues MKRNTLTAWLLGIILIFSATSCFNGPIVKGSKNYITKKENLEHFNDISMSGSANIIYQQDSSSRIEIYGSDNIVELLETK VNGKTLNIKFKKNVNIIDKGKLEIKVFSPDLNGLTLNGSGGILFANGIHTEGDLKVTINGSGNLGGSTFDTGHLAISIHG SGDVRLKQIDSKTCSASISGSGNITLDGMTGAAKYNISGSGNIKAADLEATDVYAGISGSGNISCFVNGKLGGHVSGSGN VAYKGNPQAIDFPHKKLRKLD >Mature_261_residues MKRNTLTAWLLGIILIFSATSCFNGPIVKGSKNYITKKENLEHFNDISMSGSANIIYQQDSSSRIEIYGSDNIVELLETK VNGKTLNIKFKKNVNIIDKGKLEIKVFSPDLNGLTLNGSGGILFANGIHTEGDLKVTINGSGNLGGSTFDTGHLAISIHG SGDVRLKQIDSKTCSASISGSGNITLDGMTGAAKYNISGSGNIKAADLEATDVYAGISGSGNISCFVNGKLGGHVSGSGN VAYKGNPQAIDFPHKKLRKLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27471; Mature: 27471
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRNTLTAWLLGIILIFSATSCFNGPIVKGSKNYITKKENLEHFNDISMSGSANIIYQQD CCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEECCCCCCHHCCCCCCCCEEEEEEEC SSSRIEIYGSDNIVELLETKVNGKTLNIKFKKNVNIIDKGKLEIKVFSPDLNGLTLNGSG CCCEEEEEECCCCEEEHHHCCCCEEEEEEEECCCCEEECCEEEEEEECCCCCEEEEECCC GILFANGIHTEGDLKVTINGSGNLGGSTFDTGHLAISIHGSGDVRLKQIDSKTCSASISG CEEEECCCCCCCCEEEEEECCCCCCCCEECCCEEEEEEECCCCEEEEEECCCCEEEEECC SGNITLDGMTGAAKYNISGSGNIKAADLEATDVYAGISGSGNISCFVNGKLGGHVSGSGN CCCEEEECCCCEEEEEECCCCCEEEEECEEEEEEEECCCCCCEEEEEECCCCCEECCCCC VAYKGNPQAIDFPHKKLRKLD EEECCCCCEECCCHHHHHCCC >Mature Secondary Structure MKRNTLTAWLLGIILIFSATSCFNGPIVKGSKNYITKKENLEHFNDISMSGSANIIYQQD CCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEECCCCCCHHCCCCCCCCEEEEEEEC SSSRIEIYGSDNIVELLETKVNGKTLNIKFKKNVNIIDKGKLEIKVFSPDLNGLTLNGSG CCCEEEEEECCCCEEEHHHCCCCEEEEEEEECCCCEEECCEEEEEEECCCCCEEEEECCC GILFANGIHTEGDLKVTINGSGNLGGSTFDTGHLAISIHGSGDVRLKQIDSKTCSASISG CEEEECCCCCCCCEEEEEECCCCCCCCEECCCEEEEEEECCCCEEEEEECCCCEEEEECC SGNITLDGMTGAAKYNISGSGNIKAADLEATDVYAGISGSGNISCFVNGKLGGHVSGSGN CCCEEEECCCCEEEEEECCCCCEEEEECEEEEEEEECCCCCCEEEEEECCCCCEECCCCC VAYKGNPQAIDFPHKKLRKLD EEECCCCCEECCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA