Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348807

Identifier: 29348807

GI number: 29348807

Start: 4377840

End: 4378625

Strand: Reverse

Name: 29348807

Synonym: BT_3398

Alternate gene names: NA

Gene position: 4378625-4377840 (Counterclockwise)

Preceding gene: 29348809

Following gene: 29348800

Centisome position: 69.94

GC content: 46.31

Gene sequence:

>786_bases
ATGAAAAGAAACACATTGACTGCATGGCTGCTCGGAATAATTCTGATATTCTCCGCCACCTCCTGTTTTAATGGCCCTAT
TGTGAAAGGCAGTAAAAACTACATCACCAAAAAAGAGAATCTGGAACATTTCAATGACATCAGCATGTCCGGAAGTGCCA
ACATCATCTACCAGCAAGACTCCTCCTCCCGCATCGAGATTTACGGTTCGGACAATATCGTAGAACTCCTGGAAACAAAA
GTAAACGGAAAAACATTGAATATAAAATTTAAAAAGAATGTCAATATCATCGACAAGGGCAAACTAGAGATCAAAGTTTT
CTCACCGGACCTGAACGGACTGACACTCAACGGATCGGGTGGCATTCTCTTTGCGAACGGCATTCACACCGAGGGAGATC
TTAAAGTAACGATTAACGGTTCGGGCAATTTAGGAGGAAGCACATTCGATACCGGACATCTGGCCATCTCAATTCATGGT
TCGGGTGATGTCAGACTCAAACAAATCGACAGCAAAACCTGCTCTGCAAGCATTTCCGGATCGGGCAACATCACCCTTGA
CGGCATGACAGGCGCAGCAAAGTACAACATATCAGGTTCCGGCAATATCAAAGCTGCCGACCTGGAAGCTACGGACGTAT
ATGCAGGTATCTCGGGTTCGGGTAACATCAGCTGCTTCGTCAACGGCAAACTAGGCGGGCACGTCAGCGGAAGCGGCAAC
GTCGCTTACAAAGGAAATCCTCAGGCTATTGATTTCCCTCACAAGAAGCTCCGCAAACTAGACTAA

Upstream 100 bases:

>100_bases
AAAAAGAAGCCGGTGGCGAAAAAAGTGATATTCAATGCAACTTTATAGTAACTCGCAACGTCTAATCCATATAAACTCAT
ATTAAAATCAACTATCAATT

Downstream 100 bases:

>100_bases
ATCCATAAACATCCCAAAAACATAAAAGGGCTACTGCATCTCGCGGTAGCCCATTTATTTAGTTAGTTTCATTATAAAAA
ATTTGAGAGAATTGAAAACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MKRNTLTAWLLGIILIFSATSCFNGPIVKGSKNYITKKENLEHFNDISMSGSANIIYQQDSSSRIEIYGSDNIVELLETK
VNGKTLNIKFKKNVNIIDKGKLEIKVFSPDLNGLTLNGSGGILFANGIHTEGDLKVTINGSGNLGGSTFDTGHLAISIHG
SGDVRLKQIDSKTCSASISGSGNITLDGMTGAAKYNISGSGNIKAADLEATDVYAGISGSGNISCFVNGKLGGHVSGSGN
VAYKGNPQAIDFPHKKLRKLD

Sequences:

>Translated_261_residues
MKRNTLTAWLLGIILIFSATSCFNGPIVKGSKNYITKKENLEHFNDISMSGSANIIYQQDSSSRIEIYGSDNIVELLETK
VNGKTLNIKFKKNVNIIDKGKLEIKVFSPDLNGLTLNGSGGILFANGIHTEGDLKVTINGSGNLGGSTFDTGHLAISIHG
SGDVRLKQIDSKTCSASISGSGNITLDGMTGAAKYNISGSGNIKAADLEATDVYAGISGSGNISCFVNGKLGGHVSGSGN
VAYKGNPQAIDFPHKKLRKLD
>Mature_261_residues
MKRNTLTAWLLGIILIFSATSCFNGPIVKGSKNYITKKENLEHFNDISMSGSANIIYQQDSSSRIEIYGSDNIVELLETK
VNGKTLNIKFKKNVNIIDKGKLEIKVFSPDLNGLTLNGSGGILFANGIHTEGDLKVTINGSGNLGGSTFDTGHLAISIHG
SGDVRLKQIDSKTCSASISGSGNITLDGMTGAAKYNISGSGNIKAADLEATDVYAGISGSGNISCFVNGKLGGHVSGSGN
VAYKGNPQAIDFPHKKLRKLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27471; Mature: 27471

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRNTLTAWLLGIILIFSATSCFNGPIVKGSKNYITKKENLEHFNDISMSGSANIIYQQD
CCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEECCCCCCHHCCCCCCCCEEEEEEEC
SSSRIEIYGSDNIVELLETKVNGKTLNIKFKKNVNIIDKGKLEIKVFSPDLNGLTLNGSG
CCCEEEEEECCCCEEEHHHCCCCEEEEEEEECCCCEEECCEEEEEEECCCCCEEEEECCC
GILFANGIHTEGDLKVTINGSGNLGGSTFDTGHLAISIHGSGDVRLKQIDSKTCSASISG
CEEEECCCCCCCCEEEEEECCCCCCCCEECCCEEEEEEECCCCEEEEEECCCCEEEEECC
SGNITLDGMTGAAKYNISGSGNIKAADLEATDVYAGISGSGNISCFVNGKLGGHVSGSGN
CCCEEEECCCCEEEEEECCCCCEEEEECEEEEEEEECCCCCCEEEEEECCCCCEECCCCC
VAYKGNPQAIDFPHKKLRKLD
EEECCCCCEECCCHHHHHCCC
>Mature Secondary Structure
MKRNTLTAWLLGIILIFSATSCFNGPIVKGSKNYITKKENLEHFNDISMSGSANIIYQQD
CCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEECCCCCCHHCCCCCCCCEEEEEEEC
SSSRIEIYGSDNIVELLETKVNGKTLNIKFKKNVNIIDKGKLEIKVFSPDLNGLTLNGSG
CCCEEEEEECCCCEEEHHHCCCCEEEEEEEECCCCEEECCEEEEEEECCCCCEEEEECCC
GILFANGIHTEGDLKVTINGSGNLGGSTFDTGHLAISIHGSGDVRLKQIDSKTCSASISG
CEEEECCCCCCCCEEEEEECCCCCCCCEECCCEEEEEEECCCCEEEEEECCCCEEEEECC
SGNITLDGMTGAAKYNISGSGNIKAADLEATDVYAGISGSGNISCFVNGKLGGHVSGSGN
CCCEEEECCCCEEEEEECCCCCEEEEECEEEEEEEECCCCCCEEEEEECCCCCEECCCCC
VAYKGNPQAIDFPHKKLRKLD
EEECCCCCEECCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA