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The map label for this gene is carB [H]

Identifier: 29348783

GI number: 29348783

Start: 4350311

End: 4351495

Strand: Reverse

Name: carB [H]

Synonym: BT_3374

Alternate gene names: 29348783

Gene position: 4351495-4350311 (Counterclockwise)

Preceding gene: 29348784

Following gene: 29348782

Centisome position: 69.51

GC content: 38.57

Gene sequence:

>1185_bases
ATGCTAGGAGGCTCTTTATATCAGGTCTATGCGATTAAAGAAGCTGTAAAAATGGGATATTATGTAATCACCTGCGATTA
CTTGCCGAATAACCCAGGACATCAGTATGCCCACGAATATTATAATGTCAGCACAACAGATAAGGAAGCTGTTTACGAGT
TAGCCAAAAGACTTCAAGTAGATGGCGTCGTTGCATATGCTTCAGATCCTGCAGCTCCTACAGCTGCTTATGTTTGTGAG
AAACTAGGATTGCCCACCAGCCCCTATACTTCTGTAGAAATTCTTTCTCAGAAAGACTTATTCAGACGATATCTGGCTGA
ACATAATTTCAATGTTCCCAAATACGTCGGATGTTCTTCATACACGGAGGCTTTGGAACAAATCAAGAATTTAACCCTTC
CTGTTATGATAAAGCCTGTCGATTCATCAGGAAGTAAAGGCATCAATAAACTGACTAACGTAGATCAACTAAAAGACTTT
ATAGAAGATGCCCTCTCATATTCCCGTGAAAAACGCATTATTATTGAGGAATTCATAGAGAAGGACGGATATCAGATATC
AGGAGATGCCTTTTCCGTAGACGGAATTTTAAAATTCCACTGTTTTGGAAACGAATACTACAGTTCTTCAGTTGTCAAAG
ATTTCGCCCCACTTGGTGAATGCTGGCCTTTCCAAATGAAACCTGAAATTATAACAGAACTGGAAAAGGACATACAGCGT
CTGATTTCTGAACTAAAAATGGGGACAACCGCATATAATGTCGAGGCTATTCTTGGTAAAAACGGGAAATTGTATATACT
GGAGTTAGGTGCCAGAAGCGGTGGCAGTTTAATACCTCAGATTACAGAACTGGCAACAGGAGTCAACATGGTTAAATATG
TGATAAAAGCAGCTTTGGGAGAAGATTGCTCCGAAATAGAGATGTCACCTGCAAGGGGATATTGGTCTAATTATATGTTA
CATAGCAAACAGACCGGACGGTTTAAAGAAATATCATTTGATGAAAACTTTGCAAAAAACAATCTGGTAGATTGTGTAAC
AGAACTGAAAAGTGGAGATAATGTTCATGCTTTCCGTGATGCTGGCGATGCATTGGGGACACTTATCCTCAAATATTCTT
CGAAAGAAGAAATGTTTAATGTTATAGAAAACATGGACCAGTTTGTACATATTATTATTGATTAA

Upstream 100 bases:

>100_bases
TTTATCCGGATTGCTTTTACATTAGATATATATAAAATTAAAGAAGGAATTCAAAGACTTAAGCGATTTGTCGAAAGTTT
ATAAGATGAAAAAAGTTTTA

Downstream 100 bases:

>100_bases
AATATGAGCATAACAATCCATACAGAACCTCTAGCATATACCGAATTCAGGGATTTTATCATATCCTCTGCAAACTGGTT
TGTTCCTTCTCTGTTACAGA

Product: putative carbamoyl-phosphate-synthetase

Products: NA

Alternate protein names: Carbamoyl-phosphate synthetase ammonia chain [H]

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MLGGSLYQVYAIKEAVKMGYYVITCDYLPNNPGHQYAHEYYNVSTTDKEAVYELAKRLQVDGVVAYASDPAAPTAAYVCE
KLGLPTSPYTSVEILSQKDLFRRYLAEHNFNVPKYVGCSSYTEALEQIKNLTLPVMIKPVDSSGSKGINKLTNVDQLKDF
IEDALSYSREKRIIIEEFIEKDGYQISGDAFSVDGILKFHCFGNEYYSSSVVKDFAPLGECWPFQMKPEIITELEKDIQR
LISELKMGTTAYNVEAILGKNGKLYILELGARSGGSLIPQITELATGVNMVKYVIKAALGEDCSEIEMSPARGYWSNYML
HSKQTGRFKEISFDENFAKNNLVDCVTELKSGDNVHAFRDAGDALGTLILKYSSKEEMFNVIENMDQFVHIIID

Sequences:

>Translated_394_residues
MLGGSLYQVYAIKEAVKMGYYVITCDYLPNNPGHQYAHEYYNVSTTDKEAVYELAKRLQVDGVVAYASDPAAPTAAYVCE
KLGLPTSPYTSVEILSQKDLFRRYLAEHNFNVPKYVGCSSYTEALEQIKNLTLPVMIKPVDSSGSKGINKLTNVDQLKDF
IEDALSYSREKRIIIEEFIEKDGYQISGDAFSVDGILKFHCFGNEYYSSSVVKDFAPLGECWPFQMKPEIITELEKDIQR
LISELKMGTTAYNVEAILGKNGKLYILELGARSGGSLIPQITELATGVNMVKYVIKAALGEDCSEIEMSPARGYWSNYML
HSKQTGRFKEISFDENFAKNNLVDCVTELKSGDNVHAFRDAGDALGTLILKYSSKEEMFNVIENMDQFVHIIID
>Mature_394_residues
MLGGSLYQVYAIKEAVKMGYYVITCDYLPNNPGHQYAHEYYNVSTTDKEAVYELAKRLQVDGVVAYASDPAAPTAAYVCE
KLGLPTSPYTSVEILSQKDLFRRYLAEHNFNVPKYVGCSSYTEALEQIKNLTLPVMIKPVDSSGSKGINKLTNVDQLKDF
IEDALSYSREKRIIIEEFIEKDGYQISGDAFSVDGILKFHCFGNEYYSSSVVKDFAPLGECWPFQMKPEIITELEKDIQR
LISELKMGTTAYNVEAILGKNGKLYILELGARSGGSLIPQITELATGVNMVKYVIKAALGEDCSEIEMSPARGYWSNYML
HSKQTGRFKEISFDENFAKNNLVDCVTELKSGDNVHAFRDAGDALGTLILKYSSKEEMFNVIENMDQFVHIIID

Specific function: Unknown

COG id: COG0439

COG function: function code I; Biotin carboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ATP-grasp domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011761
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR006275
- InterPro:   IPR005479
- InterPro:   IPR005483
- InterPro:   IPR005481
- InterPro:   IPR005480
- InterPro:   IPR011607
- InterPro:   IPR013817
- InterPro:   IPR016185 [H]

Pfam domain/function: PF00289 CPSase_L_chain; PF02786 CPSase_L_D2; PF02787 CPSase_L_D3; PF02142 MGS [H]

EC number: =6.3.5.5 [H]

Molecular weight: Translated: 44189; Mature: 44189

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGGSLYQVYAIKEAVKMGYYVITCDYLPNNPGHQYAHEYYNVSTTDKEAVYELAKRLQV
CCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCC
DGVVAYASDPAAPTAAYVCEKLGLPTSPYTSVEILSQKDLFRRYLAEHNFNVPKYVGCSS
CCEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
YTEALEQIKNLTLPVMIKPVDSSGSKGINKLTNVDQLKDFIEDALSYSREKRIIIEEFIE
HHHHHHHHHCCCCEEEEEECCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHH
KDGYQISGDAFSVDGILKFHCFGNEYYSSSVVKDFAPLGECWPFQMKPEIITELEKDIQR
CCCCEECCCEEEECCEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
LISELKMGTTAYNVEAILGKNGKLYILELGARSGGSLIPQITELATGVNMVKYVIKAALG
HHHHHHCCCCCEEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
EDCSEIEMSPARGYWSNYMLHSKQTGRFKEISFDENFAKNNLVDCVTELKSGDNVHAFRD
CCHHHCCCCCCCCHHHHCEEECCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCEEHHHH
AGDALGTLILKYSSKEEMFNVIENMDQFVHIIID
HHHHHHHHHHEECCHHHHHHHHHHHHHHEEEEEC
>Mature Secondary Structure
MLGGSLYQVYAIKEAVKMGYYVITCDYLPNNPGHQYAHEYYNVSTTDKEAVYELAKRLQV
CCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCC
DGVVAYASDPAAPTAAYVCEKLGLPTSPYTSVEILSQKDLFRRYLAEHNFNVPKYVGCSS
CCEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
YTEALEQIKNLTLPVMIKPVDSSGSKGINKLTNVDQLKDFIEDALSYSREKRIIIEEFIE
HHHHHHHHHCCCCEEEEEECCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHH
KDGYQISGDAFSVDGILKFHCFGNEYYSSSVVKDFAPLGECWPFQMKPEIITELEKDIQR
CCCCEECCCEEEECCEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
LISELKMGTTAYNVEAILGKNGKLYILELGARSGGSLIPQITELATGVNMVKYVIKAALG
HHHHHHCCCCCEEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
EDCSEIEMSPARGYWSNYMLHSKQTGRFKEISFDENFAKNNLVDCVTELKSGDNVHAFRD
CCHHHCCCCCCCCHHHHCEEECCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCEEHHHH
AGDALGTLILKYSSKEEMFNVIENMDQFVHIIID
HHHHHHHHHHEECCHHHHHHHHHHHHHHEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA