Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348756

Identifier: 29348756

GI number: 29348756

Start: 4314241

End: 4315650

Strand: Reverse

Name: 29348756

Synonym: BT_3347

Alternate gene names: NA

Gene position: 4315650-4314241 (Counterclockwise)

Preceding gene: 29348760

Following gene: 29348755

Centisome position: 68.94

GC content: 43.69

Gene sequence:

>1410_bases
ATGAAAAACCACCTAATAACAGTACTTGTCTGCTGTTTATTCTTCATCGGTTGTAAAGATGATAAAGCCAACTCTAATCA
GTATGACCCATCTCAACCAGTAGTATTTACAGATTTTAGCCCTAAAGAGGGAGGTATGCGAACCCGCCTGTACATTGAAG
GCAGTAATTTCGGGAATGATCCCACCAAAATTCACATTACGATCGGTGGAGAAAAAACCAAAACCATCGGAGCCGATGGA
AAAAAGATTTATTGCATGGTTCCTTCCAAGGCTTTTGATGGAATAATCAATGTTCGTGTAGATGGTCCGGATGGCAAACC
TATTGCAGAACATACATTTGAAGAGGAATTCAAGTACACTCCTGCAACGATCGTAGGTACCTTGCTACGTAAGGTAGACG
AGGATAATAATTCTGCATTTCAAGAGGGTTCGTTCGATGAAGGAGCTTCTATTCCTTCCAATGACTGTATGGTGTTCGAC
CCCAAGTACAAGGATGGGGACAACCGGTTACTTTTTTCTTCAAACCATTCTGACGGTCTCCATCTAATAGACCTGACAGA
ACGGACTGTAAAACGTCTCTTCCCAAGAACGGGATATAGCACAATGTATTCTTTCACATTCAGTGCTGACGGAGACACGT
TGCTATTTACCGATGATCACGGTCAGGACAACACCACCCGGGCAAATATCTATTATTCTCTCCGTCGTGAAAACTTTCGA
CGAATTCGTCCCTACAACTATGGCAGGACAGCATATAGCTTAGTGTATATGGATGACGGAACCATCTTTTACACCACCTG
GTGGGAGGGAAAAGTCTACAAAATGATACGCAATGGGGCTATTCCCAATATCGACGAGAATGCGGAAGTTGCCTTTAGCC
TGAGTCAGATATCGGCAGTGGGCGGTTCACATACGATATTATTCAGGCACCCGTCCAATAAATTCATGTATATGCTTTCC
GACAATTTTGGCGCAGTGTTCAGAGCCGATTATGATCCGGTGGCAAAAACATTCGGTAATCCTAGCATCATTGCCGGAAA
CATGAACGATAAAAGTTTCAAGGAAGGAACGGGAGGAAGCGCCCGGTTTAACAAACCACAGTTCGGTGTATTCGTAAAAA
ACGAGAAATACGGCGAAGGAATTGGTCCTGACAACGACCAATATGACTTCTATTTTTGTGACAGAGAAAATCACTGCATC
TGGAAACTGGATCCTCATGGGGTAGCGTCTCTTGCAGCCGGACGAAGTAACGAAAACGCCGACGGCAAAATATGGGGATA
CGTAGACGGCAATCCATTGCATGAGGCACGTTTCAATCAGCCAGCCGGTCTTGCTTACGACCCTGATACAGATATGTTCT
ATATTGGAGATATTGATAATAAAGGGATTCGTTATATGACAACGGAATAA

Upstream 100 bases:

>100_bases
TTAGATACATATTATGCTTATAATAAGAAAGATAGGCAAACGTTGTAAGCAATAATATTTATTGTTCGGATGCACTTTAA
CCATTTTATTATTTATATTT

Downstream 100 bases:

>100_bases
TACTATTTAAAACACAAGTAAATATGAGAAATGTAATCTTACTATTTTTATTGATAGTAGGCTGGACAACTACAGTCTAC
GCTCAAAATGAACAAGAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MKNHLITVLVCCLFFIGCKDDKANSNQYDPSQPVVFTDFSPKEGGMRTRLYIEGSNFGNDPTKIHITIGGEKTKTIGADG
KKIYCMVPSKAFDGIINVRVDGPDGKPIAEHTFEEEFKYTPATIVGTLLRKVDEDNNSAFQEGSFDEGASIPSNDCMVFD
PKYKDGDNRLLFSSNHSDGLHLIDLTERTVKRLFPRTGYSTMYSFTFSADGDTLLFTDDHGQDNTTRANIYYSLRRENFR
RIRPYNYGRTAYSLVYMDDGTIFYTTWWEGKVYKMIRNGAIPNIDENAEVAFSLSQISAVGGSHTILFRHPSNKFMYMLS
DNFGAVFRADYDPVAKTFGNPSIIAGNMNDKSFKEGTGGSARFNKPQFGVFVKNEKYGEGIGPDNDQYDFYFCDRENHCI
WKLDPHGVASLAAGRSNENADGKIWGYVDGNPLHEARFNQPAGLAYDPDTDMFYIGDIDNKGIRYMTTE

Sequences:

>Translated_469_residues
MKNHLITVLVCCLFFIGCKDDKANSNQYDPSQPVVFTDFSPKEGGMRTRLYIEGSNFGNDPTKIHITIGGEKTKTIGADG
KKIYCMVPSKAFDGIINVRVDGPDGKPIAEHTFEEEFKYTPATIVGTLLRKVDEDNNSAFQEGSFDEGASIPSNDCMVFD
PKYKDGDNRLLFSSNHSDGLHLIDLTERTVKRLFPRTGYSTMYSFTFSADGDTLLFTDDHGQDNTTRANIYYSLRRENFR
RIRPYNYGRTAYSLVYMDDGTIFYTTWWEGKVYKMIRNGAIPNIDENAEVAFSLSQISAVGGSHTILFRHPSNKFMYMLS
DNFGAVFRADYDPVAKTFGNPSIIAGNMNDKSFKEGTGGSARFNKPQFGVFVKNEKYGEGIGPDNDQYDFYFCDRENHCI
WKLDPHGVASLAAGRSNENADGKIWGYVDGNPLHEARFNQPAGLAYDPDTDMFYIGDIDNKGIRYMTTE
>Mature_469_residues
MKNHLITVLVCCLFFIGCKDDKANSNQYDPSQPVVFTDFSPKEGGMRTRLYIEGSNFGNDPTKIHITIGGEKTKTIGADG
KKIYCMVPSKAFDGIINVRVDGPDGKPIAEHTFEEEFKYTPATIVGTLLRKVDEDNNSAFQEGSFDEGASIPSNDCMVFD
PKYKDGDNRLLFSSNHSDGLHLIDLTERTVKRLFPRTGYSTMYSFTFSADGDTLLFTDDHGQDNTTRANIYYSLRRENFR
RIRPYNYGRTAYSLVYMDDGTIFYTTWWEGKVYKMIRNGAIPNIDENAEVAFSLSQISAVGGSHTILFRHPSNKFMYMLS
DNFGAVFRADYDPVAKTFGNPSIIAGNMNDKSFKEGTGGSARFNKPQFGVFVKNEKYGEGIGPDNDQYDFYFCDRENHCI
WKLDPHGVASLAAGRSNENADGKIWGYVDGNPLHEARFNQPAGLAYDPDTDMFYIGDIDNKGIRYMTTE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52771; Mature: 52771

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNHLITVLVCCLFFIGCKDDKANSNQYDPSQPVVFTDFSPKEGGMRTRLYIEGSNFGND
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCCC
PTKIHITIGGEKTKTIGADGKKIYCMVPSKAFDGIINVRVDGPDGKPIAEHTFEEEFKYT
CEEEEEEECCCEEEEECCCCCEEEEEECCHHHCCEEEEEEECCCCCCHHHHHHHHHHCCC
PATIVGTLLRKVDEDNNSAFQEGSFDEGASIPSNDCMVFDPKYKDGDNRLLFSSNHSDGL
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCE
HLIDLTERTVKRLFPRTGYSTMYSFTFSADGDTLLFTDDHGQDNTTRANIYYSLRRENFR
EEEECCHHHHHHHCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCEEEEEEEEEECCCHH
RIRPYNYGRTAYSLVYMDDGTIFYTTWWEGKVYKMIRNGAIPNIDENAEVAFSLSQISAV
CCCCCCCCCEEEEEEEEECCEEEEEEECCCEEEEHHHCCCCCCCCCCCEEEEEEEHHHCC
GGSHTILFRHPSNKFMYMLSDNFGAVFRADYDPVAKTFGNPSIIAGNMNDKSFKEGTGGS
CCCEEEEEECCCCCEEEEEECCCCEEEECCCCHHHHHCCCCEEEEECCCCCCCCCCCCCC
ARFNKPQFGVFVKNEKYGEGIGPDNDQYDFYFCDRENHCIWKLDPHGVASLAAGRSNENA
CCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCHHHHHCCCCCCCC
DGKIWGYVDGNPLHEARFNQPAGLAYDPDTDMFYIGDIDNKGIRYMTTE
CCEEEEEECCCCCCHHHCCCCCCCEECCCCCEEEEECCCCCCEEEEECC
>Mature Secondary Structure
MKNHLITVLVCCLFFIGCKDDKANSNQYDPSQPVVFTDFSPKEGGMRTRLYIEGSNFGND
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCCC
PTKIHITIGGEKTKTIGADGKKIYCMVPSKAFDGIINVRVDGPDGKPIAEHTFEEEFKYT
CEEEEEEECCCEEEEECCCCCEEEEEECCHHHCCEEEEEEECCCCCCHHHHHHHHHHCCC
PATIVGTLLRKVDEDNNSAFQEGSFDEGASIPSNDCMVFDPKYKDGDNRLLFSSNHSDGL
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCE
HLIDLTERTVKRLFPRTGYSTMYSFTFSADGDTLLFTDDHGQDNTTRANIYYSLRRENFR
EEEECCHHHHHHHCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCEEEEEEEEEECCCHH
RIRPYNYGRTAYSLVYMDDGTIFYTTWWEGKVYKMIRNGAIPNIDENAEVAFSLSQISAV
CCCCCCCCCEEEEEEEEECCEEEEEEECCCEEEEHHHCCCCCCCCCCCEEEEEEEHHHCC
GGSHTILFRHPSNKFMYMLSDNFGAVFRADYDPVAKTFGNPSIIAGNMNDKSFKEGTGGS
CCCEEEEEECCCCCEEEEEECCCCEEEECCCCHHHHHCCCCEEEEECCCCCCCCCCCCCC
ARFNKPQFGVFVKNEKYGEGIGPDNDQYDFYFCDRENHCIWKLDPHGVASLAAGRSNENA
CCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCHHHHHCCCCCCCC
DGKIWGYVDGNPLHEARFNQPAGLAYDPDTDMFYIGDIDNKGIRYMTTE
CCEEEEEECCCCCCHHHCCCCCCCEECCCCCEEEEECCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA