| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348756
Identifier: 29348756
GI number: 29348756
Start: 4314241
End: 4315650
Strand: Reverse
Name: 29348756
Synonym: BT_3347
Alternate gene names: NA
Gene position: 4315650-4314241 (Counterclockwise)
Preceding gene: 29348760
Following gene: 29348755
Centisome position: 68.94
GC content: 43.69
Gene sequence:
>1410_bases ATGAAAAACCACCTAATAACAGTACTTGTCTGCTGTTTATTCTTCATCGGTTGTAAAGATGATAAAGCCAACTCTAATCA GTATGACCCATCTCAACCAGTAGTATTTACAGATTTTAGCCCTAAAGAGGGAGGTATGCGAACCCGCCTGTACATTGAAG GCAGTAATTTCGGGAATGATCCCACCAAAATTCACATTACGATCGGTGGAGAAAAAACCAAAACCATCGGAGCCGATGGA AAAAAGATTTATTGCATGGTTCCTTCCAAGGCTTTTGATGGAATAATCAATGTTCGTGTAGATGGTCCGGATGGCAAACC TATTGCAGAACATACATTTGAAGAGGAATTCAAGTACACTCCTGCAACGATCGTAGGTACCTTGCTACGTAAGGTAGACG AGGATAATAATTCTGCATTTCAAGAGGGTTCGTTCGATGAAGGAGCTTCTATTCCTTCCAATGACTGTATGGTGTTCGAC CCCAAGTACAAGGATGGGGACAACCGGTTACTTTTTTCTTCAAACCATTCTGACGGTCTCCATCTAATAGACCTGACAGA ACGGACTGTAAAACGTCTCTTCCCAAGAACGGGATATAGCACAATGTATTCTTTCACATTCAGTGCTGACGGAGACACGT TGCTATTTACCGATGATCACGGTCAGGACAACACCACCCGGGCAAATATCTATTATTCTCTCCGTCGTGAAAACTTTCGA CGAATTCGTCCCTACAACTATGGCAGGACAGCATATAGCTTAGTGTATATGGATGACGGAACCATCTTTTACACCACCTG GTGGGAGGGAAAAGTCTACAAAATGATACGCAATGGGGCTATTCCCAATATCGACGAGAATGCGGAAGTTGCCTTTAGCC TGAGTCAGATATCGGCAGTGGGCGGTTCACATACGATATTATTCAGGCACCCGTCCAATAAATTCATGTATATGCTTTCC GACAATTTTGGCGCAGTGTTCAGAGCCGATTATGATCCGGTGGCAAAAACATTCGGTAATCCTAGCATCATTGCCGGAAA CATGAACGATAAAAGTTTCAAGGAAGGAACGGGAGGAAGCGCCCGGTTTAACAAACCACAGTTCGGTGTATTCGTAAAAA ACGAGAAATACGGCGAAGGAATTGGTCCTGACAACGACCAATATGACTTCTATTTTTGTGACAGAGAAAATCACTGCATC TGGAAACTGGATCCTCATGGGGTAGCGTCTCTTGCAGCCGGACGAAGTAACGAAAACGCCGACGGCAAAATATGGGGATA CGTAGACGGCAATCCATTGCATGAGGCACGTTTCAATCAGCCAGCCGGTCTTGCTTACGACCCTGATACAGATATGTTCT ATATTGGAGATATTGATAATAAAGGGATTCGTTATATGACAACGGAATAA
Upstream 100 bases:
>100_bases TTAGATACATATTATGCTTATAATAAGAAAGATAGGCAAACGTTGTAAGCAATAATATTTATTGTTCGGATGCACTTTAA CCATTTTATTATTTATATTT
Downstream 100 bases:
>100_bases TACTATTTAAAACACAAGTAAATATGAGAAATGTAATCTTACTATTTTTATTGATAGTAGGCTGGACAACTACAGTCTAC GCTCAAAATGAACAAGAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 469; Mature: 469
Protein sequence:
>469_residues MKNHLITVLVCCLFFIGCKDDKANSNQYDPSQPVVFTDFSPKEGGMRTRLYIEGSNFGNDPTKIHITIGGEKTKTIGADG KKIYCMVPSKAFDGIINVRVDGPDGKPIAEHTFEEEFKYTPATIVGTLLRKVDEDNNSAFQEGSFDEGASIPSNDCMVFD PKYKDGDNRLLFSSNHSDGLHLIDLTERTVKRLFPRTGYSTMYSFTFSADGDTLLFTDDHGQDNTTRANIYYSLRRENFR RIRPYNYGRTAYSLVYMDDGTIFYTTWWEGKVYKMIRNGAIPNIDENAEVAFSLSQISAVGGSHTILFRHPSNKFMYMLS DNFGAVFRADYDPVAKTFGNPSIIAGNMNDKSFKEGTGGSARFNKPQFGVFVKNEKYGEGIGPDNDQYDFYFCDRENHCI WKLDPHGVASLAAGRSNENADGKIWGYVDGNPLHEARFNQPAGLAYDPDTDMFYIGDIDNKGIRYMTTE
Sequences:
>Translated_469_residues MKNHLITVLVCCLFFIGCKDDKANSNQYDPSQPVVFTDFSPKEGGMRTRLYIEGSNFGNDPTKIHITIGGEKTKTIGADG KKIYCMVPSKAFDGIINVRVDGPDGKPIAEHTFEEEFKYTPATIVGTLLRKVDEDNNSAFQEGSFDEGASIPSNDCMVFD PKYKDGDNRLLFSSNHSDGLHLIDLTERTVKRLFPRTGYSTMYSFTFSADGDTLLFTDDHGQDNTTRANIYYSLRRENFR RIRPYNYGRTAYSLVYMDDGTIFYTTWWEGKVYKMIRNGAIPNIDENAEVAFSLSQISAVGGSHTILFRHPSNKFMYMLS DNFGAVFRADYDPVAKTFGNPSIIAGNMNDKSFKEGTGGSARFNKPQFGVFVKNEKYGEGIGPDNDQYDFYFCDRENHCI WKLDPHGVASLAAGRSNENADGKIWGYVDGNPLHEARFNQPAGLAYDPDTDMFYIGDIDNKGIRYMTTE >Mature_469_residues MKNHLITVLVCCLFFIGCKDDKANSNQYDPSQPVVFTDFSPKEGGMRTRLYIEGSNFGNDPTKIHITIGGEKTKTIGADG KKIYCMVPSKAFDGIINVRVDGPDGKPIAEHTFEEEFKYTPATIVGTLLRKVDEDNNSAFQEGSFDEGASIPSNDCMVFD PKYKDGDNRLLFSSNHSDGLHLIDLTERTVKRLFPRTGYSTMYSFTFSADGDTLLFTDDHGQDNTTRANIYYSLRRENFR RIRPYNYGRTAYSLVYMDDGTIFYTTWWEGKVYKMIRNGAIPNIDENAEVAFSLSQISAVGGSHTILFRHPSNKFMYMLS DNFGAVFRADYDPVAKTFGNPSIIAGNMNDKSFKEGTGGSARFNKPQFGVFVKNEKYGEGIGPDNDQYDFYFCDRENHCI WKLDPHGVASLAAGRSNENADGKIWGYVDGNPLHEARFNQPAGLAYDPDTDMFYIGDIDNKGIRYMTTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52771; Mature: 52771
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNHLITVLVCCLFFIGCKDDKANSNQYDPSQPVVFTDFSPKEGGMRTRLYIEGSNFGND CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCCC PTKIHITIGGEKTKTIGADGKKIYCMVPSKAFDGIINVRVDGPDGKPIAEHTFEEEFKYT CEEEEEEECCCEEEEECCCCCEEEEEECCHHHCCEEEEEEECCCCCCHHHHHHHHHHCCC PATIVGTLLRKVDEDNNSAFQEGSFDEGASIPSNDCMVFDPKYKDGDNRLLFSSNHSDGL CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCE HLIDLTERTVKRLFPRTGYSTMYSFTFSADGDTLLFTDDHGQDNTTRANIYYSLRRENFR EEEECCHHHHHHHCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCEEEEEEEEEECCCHH RIRPYNYGRTAYSLVYMDDGTIFYTTWWEGKVYKMIRNGAIPNIDENAEVAFSLSQISAV CCCCCCCCCEEEEEEEEECCEEEEEEECCCEEEEHHHCCCCCCCCCCCEEEEEEEHHHCC GGSHTILFRHPSNKFMYMLSDNFGAVFRADYDPVAKTFGNPSIIAGNMNDKSFKEGTGGS CCCEEEEEECCCCCEEEEEECCCCEEEECCCCHHHHHCCCCEEEEECCCCCCCCCCCCCC ARFNKPQFGVFVKNEKYGEGIGPDNDQYDFYFCDRENHCIWKLDPHGVASLAAGRSNENA CCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCHHHHHCCCCCCCC DGKIWGYVDGNPLHEARFNQPAGLAYDPDTDMFYIGDIDNKGIRYMTTE CCEEEEEECCCCCCHHHCCCCCCCEECCCCCEEEEECCCCCCEEEEECC >Mature Secondary Structure MKNHLITVLVCCLFFIGCKDDKANSNQYDPSQPVVFTDFSPKEGGMRTRLYIEGSNFGND CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCCC PTKIHITIGGEKTKTIGADGKKIYCMVPSKAFDGIINVRVDGPDGKPIAEHTFEEEFKYT CEEEEEEECCCEEEEECCCCCEEEEEECCHHHCCEEEEEEECCCCCCHHHHHHHHHHCCC PATIVGTLLRKVDEDNNSAFQEGSFDEGASIPSNDCMVFDPKYKDGDNRLLFSSNHSDGL CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCE HLIDLTERTVKRLFPRTGYSTMYSFTFSADGDTLLFTDDHGQDNTTRANIYYSLRRENFR EEEECCHHHHHHHCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCEEEEEEEEEECCCHH RIRPYNYGRTAYSLVYMDDGTIFYTTWWEGKVYKMIRNGAIPNIDENAEVAFSLSQISAV CCCCCCCCCEEEEEEEEECCEEEEEEECCCEEEEHHHCCCCCCCCCCCEEEEEEEHHHCC GGSHTILFRHPSNKFMYMLSDNFGAVFRADYDPVAKTFGNPSIIAGNMNDKSFKEGTGGS CCCEEEEEECCCCCEEEEEECCCCEEEECCCCHHHHHCCCCEEEEECCCCCCCCCCCCCC ARFNKPQFGVFVKNEKYGEGIGPDNDQYDFYFCDRENHCIWKLDPHGVASLAAGRSNENA CCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCHHHHHCCCCCCCC DGKIWGYVDGNPLHEARFNQPAGLAYDPDTDMFYIGDIDNKGIRYMTTE CCEEEEEECCCCCCHHHCCCCCCCEECCCCCEEEEECCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA