| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is srpH [H]
Identifier: 29348665
GI number: 29348665
Start: 4157407
End: 4158309
Strand: Reverse
Name: srpH [H]
Synonym: BT_3256
Alternate gene names: 29348665
Gene position: 4158309-4157407 (Counterclockwise)
Preceding gene: 29348668
Following gene: 29348664
Centisome position: 66.42
GC content: 48.28
Gene sequence:
>903_bases ATGAGTCCATTGAACTTTACCCACATTCTGACACAGGCAGTCGATGAGCTATCGGAAAGCGAATCTTACAAAGGGCTGTT TCATCAACATAAAGATGGCGAACCATTGCCCTCTGCTAAAGTTTTGTATGAAATTATCGAGCTTTCACGTGCCATTCTCT TCCCCGGATACTACGGAAATTCCACCATCAACAGCCGGACAATCAATTATCACATCGGTGTAAATATCGAAAAGTTATTT GACTTGCTCACAGAGCAAATCCTGGCCGGACTATGTTTCAGTACGGCAGAAGGAGACTGCAACGTCTGCTCGGAGTCGAG AAGAGAAGAAGCCGCCCGACTGGCTGCGAACTTTATCAGCAAACTACCCGCCATGAGAAGAATACTGGCTACGGACGTAG AAGCCGCCTACAACGGTGACCCCGCTGCCAAAAGCTACGGTGAAGTAATTTTCTGCTATCCCGCCATTAAGGCAATCAGC AATTATCGTATTGCGCACGAACTGCTGGAACTGGGTGTTCCCCTGATTCCTCGCATGATCACGGAAATGGCTCATAGCGA GACGGGTATCGATATCCATCCGGGAGCGAAGATAGGCAGTCACTTTACCATAGACCACGGAACGGGTGTCGTGATCGGTG CTACAAGCATCATCGGGAACAATGTCAAATTATATCAGGGTGTCACCCTAGGAGCAAAAAGCTTCCCGCTGGATGCCGAC GGAAAACCGATCAAGGGTATCCCCCGCCACCCGATACTGGAAGACAATGTCATAGTCTACTCCAACGCCACCATTCTTGG AAGAATCACTATCGGAAGCGACGCAACCGTAGGAGGAAATATCTGGGTAACGGAAAACATTCCTGCCGGAGCAAAGATTG TACAAACAAAAGCAAAGAAATAA
Upstream 100 bases:
>100_bases TTTGAATGCCACAAAAATACATTAATTATATTGAATCTCAACGAAATTTATTATTTTTTTTAATACCTTTGTCCCCATAT AAACATGAGTAACTGACCTA
Downstream 100 bases:
>100_bases AATCAATAAACTATATATGAGCGAACAATTCGAGATGATAGCCAAGACCTTCCAGGGACTGGAAGAGATACTTGCTGAAG AACTTACAACATTGGGAGCC
Product: serine acetyltransferase
Products: NA
Alternate protein names: SAT [H]
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MSPLNFTHILTQAVDELSESESYKGLFHQHKDGEPLPSAKVLYEIIELSRAILFPGYYGNSTINSRTINYHIGVNIEKLF DLLTEQILAGLCFSTAEGDCNVCSESRREEAARLAANFISKLPAMRRILATDVEAAYNGDPAAKSYGEVIFCYPAIKAIS NYRIAHELLELGVPLIPRMITEMAHSETGIDIHPGAKIGSHFTIDHGTGVVIGATSIIGNNVKLYQGVTLGAKSFPLDAD GKPIKGIPRHPILEDNVIVYSNATILGRITIGSDATVGGNIWVTENIPAGAKIVQTKAKK
Sequences:
>Translated_300_residues MSPLNFTHILTQAVDELSESESYKGLFHQHKDGEPLPSAKVLYEIIELSRAILFPGYYGNSTINSRTINYHIGVNIEKLF DLLTEQILAGLCFSTAEGDCNVCSESRREEAARLAANFISKLPAMRRILATDVEAAYNGDPAAKSYGEVIFCYPAIKAIS NYRIAHELLELGVPLIPRMITEMAHSETGIDIHPGAKIGSHFTIDHGTGVVIGATSIIGNNVKLYQGVTLGAKSFPLDAD GKPIKGIPRHPILEDNVIVYSNATILGRITIGSDATVGGNIWVTENIPAGAKIVQTKAKK >Mature_299_residues SPLNFTHILTQAVDELSESESYKGLFHQHKDGEPLPSAKVLYEIIELSRAILFPGYYGNSTINSRTINYHIGVNIEKLFD LLTEQILAGLCFSTAEGDCNVCSESRREEAARLAANFISKLPAMRRILATDVEAAYNGDPAAKSYGEVIFCYPAIKAISN YRIAHELLELGVPLIPRMITEMAHSETGIDIHPGAKIGSHFTIDHGTGVVIGATSIIGNNVKLYQGVTLGAKSFPLDADG KPIKGIPRHPILEDNVIVYSNATILGRITIGSDATVGGNIWVTENIPAGAKIVQTKAKK
Specific function: Cysteine biosynthesis. [C]
COG id: COG1045
COG function: function code E; Serine acetyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1790035, Length=166, Percent_Identity=33.1325301204819, Blast_Score=94, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: =2.3.1.30 [H]
Molecular weight: Translated: 32472; Mature: 32340
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPLNFTHILTQAVDELSESESYKGLFHQHKDGEPLPSAKVLYEIIELSRAILFPGYYGN CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC STINSRTINYHIGVNIEKLFDLLTEQILAGLCFSTAEGDCNVCSESRREEAARLAANFIS CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH KLPAMRRILATDVEAAYNGDPAAKSYGEVIFCYPAIKAISNYRIAHELLELGVPLIPRMI HHHHHHHHHHHHHHHHCCCCCCHHHHCCEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHH TEMAHSETGIDIHPGAKIGSHFTIDHGTGVVIGATSIIGNNVKLYQGVTLGAKSFPLDAD HHHHHCCCCCEECCCCCCCCEEEEECCCEEEEEEHHHHCCCEEEEECEEECCCCCCCCCC GKPIKGIPRHPILEDNVIVYSNATILGRITIGSDATVGGNIWVTENIPAGAKIVQTKAKK CCCCCCCCCCCCCCCCEEEEECCEEEEEEEECCCCEECCCEEEECCCCCCCHHHHCCCCC >Mature Secondary Structure SPLNFTHILTQAVDELSESESYKGLFHQHKDGEPLPSAKVLYEIIELSRAILFPGYYGN CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC STINSRTINYHIGVNIEKLFDLLTEQILAGLCFSTAEGDCNVCSESRREEAARLAANFIS CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH KLPAMRRILATDVEAAYNGDPAAKSYGEVIFCYPAIKAISNYRIAHELLELGVPLIPRMI HHHHHHHHHHHHHHHHCCCCCCHHHHCCEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHH TEMAHSETGIDIHPGAKIGSHFTIDHGTGVVIGATSIIGNNVKLYQGVTLGAKSFPLDAD HHHHHCCCCCEECCCCCCCCEEEEECCCEEEEEEHHHHCCCEEEEECEEECCCCCCCCCC GKPIKGIPRHPILEDNVIVYSNATILGRITIGSDATVGGNIWVTENIPAGAKIVQTKAKK CCCCCCCCCCCCCCCCEEEEECCEEEEEEEECCCCEECCCEEEECCCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7603442 [H]