| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is znuC [C]
Identifier: 29348657
GI number: 29348657
Start: 4148143
End: 4148964
Strand: Reverse
Name: znuC [C]
Synonym: BT_3248
Alternate gene names: 29348657
Gene position: 4148964-4148143 (Counterclockwise)
Preceding gene: 29348658
Following gene: 29348656
Centisome position: 66.27
GC content: 51.22
Gene sequence:
>822_bases ATGATACATAAACGAAGTAATTCTCCAAATATGAAACCGATTATCGAAATAAAGAACCTTGCTGCCGGATACGACGGCCG TACCGTACTCCACGACGTCAACCTGAACGTTTACGAACGGGACTTTCTGGGCATCATCGGTCCGAACGGAGGCGGTAAGA CAACACTCATCAAGTGTATCCTCGGTCTGCTGAAACCGACAGCCGGAGAAATCAACTTCCATGCCCCTACAGAAGCATCC TCCCACTCTCAACTTTCCACTTCCAACCTTCCACTTTCCCTCGGCTATCTGCCGCAGTATAGCACCATCGACCGGAAATT CCCGATTTCGGTAGAGGAAGTGATACTTTCCGGACTAAGTATCCAGAAATCCCTCACCTCCCGCTTCACTCCCGAGCAAA GAGAAAAAGGCAAGCATATCATCGCCCGTATGGGACTCGAAGGACTCGAACACCGTTCCATCGGGCAGCTTAGCGGCGGG CAACTACAACGCGCACTGCTGGGACGTGCCATCATCTCCGACCCTTCGGTACTGATTCTTGACGAACCCAGCACGTATAT CGACAAACGTTTTGAAGCCCGACTCTACGAACTGCTGGCGGAGATTAACAAAGAATGCGCCATCATCCTTGTCAGTCACG ACATTGGCACTGTACTGCAACAAGTGAAATCCATCGCCTGCGTCAACGAGACACTGGATTACCACCCTGACACGGGCGTT TCCACAGAATGGCTGGAAAGAAATTTCAACTGCCCTATCGAACTGCTGGGACACGGCACGTTGCCACACCGCGTTCTCGG TGAACATCATCATCATCACTAA
Upstream 100 bases:
>100_bases CGTTAAGCTACGACTGGGAAACGGAAATGCTGAACGTAGCCAAAGCTCTCACCCCTATGGACCCCGAATAAAAACGGGCT TCCATAGCGTTAATGACCGA
Downstream 100 bases:
>100_bases ACATTCATTTGCCGGTGCTACATCAAAGAACGGCCGCACTGCATATCAGTCATTTACAACGGTCACATCAAGCAGCAACA ACTGACTTCTCAACTGTTAA
Product: putative metal ABC transporter ATP-binding protein
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MIHKRSNSPNMKPIIEIKNLAAGYDGRTVLHDVNLNVYERDFLGIIGPNGGGKTTLIKCILGLLKPTAGEINFHAPTEAS SHSQLSTSNLPLSLGYLPQYSTIDRKFPISVEEVILSGLSIQKSLTSRFTPEQREKGKHIIARMGLEGLEHRSIGQLSGG QLQRALLGRAIISDPSVLILDEPSTYIDKRFEARLYELLAEINKECAIILVSHDIGTVLQQVKSIACVNETLDYHPDTGV STEWLERNFNCPIELLGHGTLPHRVLGEHHHHH
Sequences:
>Translated_273_residues MIHKRSNSPNMKPIIEIKNLAAGYDGRTVLHDVNLNVYERDFLGIIGPNGGGKTTLIKCILGLLKPTAGEINFHAPTEAS SHSQLSTSNLPLSLGYLPQYSTIDRKFPISVEEVILSGLSIQKSLTSRFTPEQREKGKHIIARMGLEGLEHRSIGQLSGG QLQRALLGRAIISDPSVLILDEPSTYIDKRFEARLYELLAEINKECAIILVSHDIGTVLQQVKSIACVNETLDYHPDTGV STEWLERNFNCPIELLGHGTLPHRVLGEHHHHH >Mature_273_residues MIHKRSNSPNMKPIIEIKNLAAGYDGRTVLHDVNLNVYERDFLGIIGPNGGGKTTLIKCILGLLKPTAGEINFHAPTEAS SHSQLSTSNLPLSLGYLPQYSTIDRKFPISVEEVILSGLSIQKSLTSRFTPEQREKGKHIIARMGLEGLEHRSIGQLSGG QLQRALLGRAIISDPSVLILDEPSTYIDKRFEARLYELLAEINKECAIILVSHDIGTVLQQVKSIACVNETLDYHPDTGV STEWLERNFNCPIELLGHGTLPHRVLGEHHHHH
Specific function: Part of an ATP-driven transport system TM_0123/TM_0124/TM_0125 for a metal. Probably responsible for energy coupling to the transport system [H]
COG id: COG1121
COG function: function code P; ABC-type Mn/Zn transport systems, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI116734710, Length=203, Percent_Identity=30.0492610837438, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI27477115, Length=206, Percent_Identity=31.0679611650485, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI153792144, Length=194, Percent_Identity=29.3814432989691, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI27881501, Length=216, Percent_Identity=29.1666666666667, Blast_Score=75, Evalue=9e-14, Organism=Homo sapiens, GI30795238, Length=216, Percent_Identity=29.1666666666667, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI105990541, Length=207, Percent_Identity=26.0869565217391, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI31657092, Length=210, Percent_Identity=25.2380952380952, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI47078218, Length=190, Percent_Identity=26.3157894736842, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI45446740, Length=190, Percent_Identity=26.3157894736842, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI171184400, Length=219, Percent_Identity=24.2009132420091, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI27436953, Length=218, Percent_Identity=23.394495412844, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI148612853, Length=206, Percent_Identity=28.1553398058252, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI27262624, Length=215, Percent_Identity=22.7906976744186, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI27262626, Length=215, Percent_Identity=22.7906976744186, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI21536376, Length=202, Percent_Identity=30.1980198019802, Blast_Score=65, Evalue=9e-11, Organism=Homo sapiens, GI9961250, Length=229, Percent_Identity=23.5807860262009, Blast_Score=65, Evalue=9e-11, Organism=Escherichia coli, GI1788165, Length=239, Percent_Identity=28.8702928870293, Blast_Score=114, Evalue=7e-27, Organism=Escherichia coli, GI87081791, Length=250, Percent_Identity=28, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1786803, Length=237, Percent_Identity=27.4261603375527, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI87081709, Length=222, Percent_Identity=27.9279279279279, Blast_Score=95, Evalue=6e-21, Organism=Escherichia coli, GI1790739, Length=202, Percent_Identity=30.6930693069307, Blast_Score=94, Evalue=7e-21, Organism=Escherichia coli, GI1788225, Length=207, Percent_Identity=32.8502415458937, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1788761, Length=205, Percent_Identity=30.7317073170732, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1786345, Length=248, Percent_Identity=28.6290322580645, Blast_Score=91, Evalue=7e-20, Organism=Escherichia coli, GI1789593, Length=179, Percent_Identity=34.6368715083799, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1789864, Length=227, Percent_Identity=25.9911894273128, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI1790544, Length=229, Percent_Identity=25.3275109170306, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI1787370, Length=208, Percent_Identity=27.8846153846154, Blast_Score=88, Evalue=7e-19, Organism=Escherichia coli, GI87082267, Length=218, Percent_Identity=27.0642201834862, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI87081834, Length=213, Percent_Identity=28.6384976525822, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI1788450, Length=220, Percent_Identity=31.8181818181818, Blast_Score=84, Evalue=8e-18, Organism=Escherichia coli, GI1786872, Length=218, Percent_Identity=27.0642201834862, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1789751, Length=208, Percent_Identity=29.3269230769231, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1787712, Length=227, Percent_Identity=26.431718061674, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI87081782, Length=187, Percent_Identity=27.807486631016, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1787500, Length=190, Percent_Identity=27.8947368421053, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1786398, Length=208, Percent_Identity=28.8461538461538, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1790162, Length=208, Percent_Identity=27.8846153846154, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1786654, Length=224, Percent_Identity=25.4464285714286, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1786253, Length=193, Percent_Identity=28.4974093264249, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1789891, Length=239, Percent_Identity=25.9414225941423, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1788506, Length=201, Percent_Identity=29.3532338308458, Blast_Score=74, Evalue=8e-15, Organism=Escherichia coli, GI1788472, Length=218, Percent_Identity=26.1467889908257, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1786319, Length=209, Percent_Identity=26.3157894736842, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1787164, Length=209, Percent_Identity=27.7511961722488, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1786975, Length=244, Percent_Identity=25, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI2367384, Length=237, Percent_Identity=27.0042194092827, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1789873, Length=209, Percent_Identity=24.8803827751196, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1789962, Length=224, Percent_Identity=25.4464285714286, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1787758, Length=207, Percent_Identity=25.1207729468599, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1786703, Length=230, Percent_Identity=26.0869565217391, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1790525, Length=215, Percent_Identity=25.5813953488372, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI1789032, Length=202, Percent_Identity=23.7623762376238, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI1787105, Length=213, Percent_Identity=25.8215962441315, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1787792, Length=224, Percent_Identity=26.3392857142857, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1787089, Length=211, Percent_Identity=23.2227488151659, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI1787112, Length=195, Percent_Identity=28.2051282051282, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1786698, Length=209, Percent_Identity=25.8373205741627, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1788053, Length=207, Percent_Identity=28.5024154589372, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI145693107, Length=226, Percent_Identity=23.8938053097345, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1788897, Length=197, Percent_Identity=24.8730964467005, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1787182, Length=199, Percent_Identity=27.6381909547739, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1790190, Length=215, Percent_Identity=26.5116279069767, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI48994883, Length=226, Percent_Identity=25.2212389380531, Blast_Score=61, Evalue=7e-11, Organism=Caenorhabditis elegans, GI17510237, Length=206, Percent_Identity=26.6990291262136, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17543740, Length=229, Percent_Identity=27.5109170305677, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17569143, Length=236, Percent_Identity=27.9661016949153, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17565938, Length=200, Percent_Identity=29.5, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17565586, Length=209, Percent_Identity=27.2727272727273, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI25146777, Length=203, Percent_Identity=29.064039408867, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI193211017, Length=223, Percent_Identity=27.8026905829596, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI193211015, Length=214, Percent_Identity=27.5700934579439, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI71996809, Length=214, Percent_Identity=27.1028037383178, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI115534520, Length=222, Percent_Identity=24.3243243243243, Blast_Score=68, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17559834, Length=203, Percent_Identity=25.615763546798, Blast_Score=68, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17555800, Length=191, Percent_Identity=26.7015706806283, Blast_Score=67, Evalue=8e-12, Organism=Caenorhabditis elegans, GI17569145, Length=235, Percent_Identity=26.3829787234043, Blast_Score=67, Evalue=8e-12, Organism=Caenorhabditis elegans, GI71988343, Length=223, Percent_Identity=28.6995515695067, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI212646699, Length=210, Percent_Identity=26.6666666666667, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI115533608, Length=208, Percent_Identity=26.9230769230769, Blast_Score=64, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6321121, Length=215, Percent_Identity=28.3720930232558, Blast_Score=80, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6320296, Length=203, Percent_Identity=31.5270935960591, Blast_Score=64, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6324985, Length=227, Percent_Identity=25.1101321585903, Blast_Score=63, Evalue=6e-11, Organism=Drosophila melanogaster, GI24582014, Length=220, Percent_Identity=28.6363636363636, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI24582012, Length=220, Percent_Identity=28.6363636363636, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI24650855, Length=217, Percent_Identity=27.6497695852535, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI24650853, Length=217, Percent_Identity=27.6497695852535, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI24653245, Length=196, Percent_Identity=25.5102040816327, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI281362751, Length=217, Percent_Identity=27.6497695852535, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI85726357, Length=233, Percent_Identity=26.6094420600858, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI28574150, Length=182, Percent_Identity=25.2747252747253, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI116007328, Length=182, Percent_Identity=25.2747252747253, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24648314, Length=180, Percent_Identity=28.3333333333333, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI281363262, Length=196, Percent_Identity=25.5102040816327, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI24666092, Length=209, Percent_Identity=25.3588516746411, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI28571209, Length=204, Percent_Identity=24.5098039215686, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI85725262, Length=195, Percent_Identity=26.6666666666667, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 30251; Mature: 30251
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHKRSNSPNMKPIIEIKNLAAGYDGRTVLHDVNLNVYERDFLGIIGPNGGGKTTLIKCI CCCCCCCCCCCCCEEEEHHHHCCCCCCEEEEECCCCEEECCEEEEECCCCCCHHHHHHHH LGLLKPTAGEINFHAPTEASSHSQLSTSNLPLSLGYLPQYSTIDRKFPISVEEVILSGLS HHHHCCCCCCEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHCCH IQKSLTSRFTPEQREKGKHIIARMGLEGLEHRSIGQLSGGQLQRALLGRAIISDPSVLIL HHHHHHHCCCCHHHHHHHHHHHHHCCHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE DEPSTYIDKRFEARLYELLAEINKECAIILVSHDIGTVLQQVKSIACVNETLDYHPDTGV ECCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCC STEWLERNFNCPIELLGHGTLPHRVLGEHHHHH CHHHHHCCCCCCEEEEECCCCCHHHHCCCCCCC >Mature Secondary Structure MIHKRSNSPNMKPIIEIKNLAAGYDGRTVLHDVNLNVYERDFLGIIGPNGGGKTTLIKCI CCCCCCCCCCCCCEEEEHHHHCCCCCCEEEEECCCCEEECCEEEEECCCCCCHHHHHHHH LGLLKPTAGEINFHAPTEASSHSQLSTSNLPLSLGYLPQYSTIDRKFPISVEEVILSGLS HHHHCCCCCCEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHCCH IQKSLTSRFTPEQREKGKHIIARMGLEGLEHRSIGQLSGGQLQRALLGRAIISDPSVLIL HHHHHHHCCCCHHHHHHHHHHHHHCCHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE DEPSTYIDKRFEARLYELLAEINKECAIILVSHDIGTVLQQVKSIACVNETLDYHPDTGV ECCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCC STEWLERNFNCPIELLGHGTLPHRVLGEHHHHH CHHHHHCCCCCCEEEEECCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]