| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348580
Identifier: 29348580
GI number: 29348580
Start: 4045654
End: 4047087
Strand: Reverse
Name: 29348580
Synonym: BT_3171
Alternate gene names: NA
Gene position: 4047087-4045654 (Counterclockwise)
Preceding gene: 29348581
Following gene: 29348575
Centisome position: 64.65
GC content: 47.35
Gene sequence:
>1434_bases ATGAAAAAACATTTTCTGATTTTTACAATCTCGCTTCTATTTTTCTCGCTTGCACAAGGCAAAGTAAAGCTCCCTGCCAT GATGGGAGATCATATGGTACTCCAACAAAACAGTTCCGTTAAGCTGTGGGGATGGGCAGACGGCAAAAAGGTGACTGTCA CCACCTCTTGGAATAACCGTACTTATAAGGTATCGACAGACGATGAGGGAGCCTGGCTGGTCAAAGTGGATACTCCTGCC GGGAGTTTTACTCCTTATTCTATTACCATCAGTGACGGGATCCGGGTCACGCTATCGGATATATTAATAGGAGAGGTATG GATATGCTCCGGTCAGTCTAACATGGAAATGACCATGAAAGGAAACATGGGACAACCCATCGACCATTCGCTGGAAACTC TTCTGAACGCAGGCAACTACCGCGACCGTATCCGTTTTATCACTGTCCCCCGAACCAAAGGAGTGAAAGAACGGACAGAC TTTGAAGGAGCGAAATGGGAAGTTTCTTCGCCCGAAACCACTATGGATTGCAGTGCCGCAGGTTACTTCTTTGCCCGACA ACTGACGGAAACGCTTCATCTCCCCGTAGGACTGGTCATCAACAGTTGGGGAGGTTCACGAATCGAGGCATGGATGACAG AAGAAACGCTCGCCTCCGTGAAAGGCGCAAATATAGAAGCCGCCAAAAATCCAAAGTTAGATACGAACAGCCGGCTGCAA TGTCTGTATAATATCATGTTACTGCCTGTGAAAAACTATACGGCACGCGGATTTCTATGGTATCAGGGAGAGTCGAATCT ATTCAACTATCAGATCTATGCTCCGATGATGACTGCGATGGTGCAGCTCTGGAGAAATGTATGGGAAACACCGGATATGC CTTTTTATTATGTCCAGATTGCTCCGCACAAATACGGAAACAGCCGGAATATAAATTCCGCCTTATTGCAGGAAGCACAA ATGAAAGCATTACAGACAATCCCCAACTCCGGAATGATTCCTACGATAGATGTCGGCGACGAGTTCTGCATTCATCCCCC TCAGAAAAATGTAGTAGGACTCCGGCTGGCCAATCTCGCACTGACTAAAACATACGGTCTCCATAAATTCCCATCTACCG GACCGATGATGACAAAGGTGGAATATTCAAAGAACAAAGCGATCGTCACACTCGACAATGCCCCTTCCGGACTGGCACCG GGCAACTGTGAATTGGAAGGTTTCGAAATAGCAGGAGCCGACAAGAAGTTCTATCCGGCAAAAGCACGGATTGCAGGTCG CACAAGAAATGTGGAAGTATGGAGCGATCAGGTCGCCCAACCGGTAGCCGTACGGTATGCTTTCCGTAATTATGTAGGAA ACATCACTTTACGCAATACATTGGGGATCGCTGCTTTCCCGTTCCGGACGGATACATGGGATGATGTAAAGTAA
Upstream 100 bases:
>100_bases AGAATGACTAAATAGTATTATTCCATATTTAAATTAGGTTGTAATTTTGCCCTATACCTAAGTGAAGTATTTGTCAAATC CTAATTAATAAAACAATAGT
Downstream 100 bases:
>100_bases GAGCCTGATTAGCCTGTGTGCAGGGTATATATGTCCTGCGTACAGGAGCTATATATCCAACGCGCAGGAGCTATATATCC AATATGTTGGGCATATAGCT
Product: sialic acid-specific 9-O-acetylesterase
Products: NA
Alternate protein names: Sialic Acid-Specific 9-O-Acetylesterase; Conserved Domain Protein; Hydrolase Protein; Sialic Acid-Specific 9-O-Acetylesterase-Like Protein; Secreted Protein; Sialic Acid-Specific Acetylesterase; Sialate O-Acetylesterase Homolog; Sialic-Acid O-Acetylesterase; LPXTG-Motif Cell Wall Anchor Domain-Containing Protein; Glycoside Hydrolase Family Protein; Glycosyl Hydrolase; Acetyl-Xylan Esterase; Sialic Acidspecific 9-O-Acetylesterase
Number of amino acids: Translated: 477; Mature: 477
Protein sequence:
>477_residues MKKHFLIFTISLLFFSLAQGKVKLPAMMGDHMVLQQNSSVKLWGWADGKKVTVTTSWNNRTYKVSTDDEGAWLVKVDTPA GSFTPYSITISDGIRVTLSDILIGEVWICSGQSNMEMTMKGNMGQPIDHSLETLLNAGNYRDRIRFITVPRTKGVKERTD FEGAKWEVSSPETTMDCSAAGYFFARQLTETLHLPVGLVINSWGGSRIEAWMTEETLASVKGANIEAAKNPKLDTNSRLQ CLYNIMLLPVKNYTARGFLWYQGESNLFNYQIYAPMMTAMVQLWRNVWETPDMPFYYVQIAPHKYGNSRNINSALLQEAQ MKALQTIPNSGMIPTIDVGDEFCIHPPQKNVVGLRLANLALTKTYGLHKFPSTGPMMTKVEYSKNKAIVTLDNAPSGLAP GNCELEGFEIAGADKKFYPAKARIAGRTRNVEVWSDQVAQPVAVRYAFRNYVGNITLRNTLGIAAFPFRTDTWDDVK
Sequences:
>Translated_477_residues MKKHFLIFTISLLFFSLAQGKVKLPAMMGDHMVLQQNSSVKLWGWADGKKVTVTTSWNNRTYKVSTDDEGAWLVKVDTPA GSFTPYSITISDGIRVTLSDILIGEVWICSGQSNMEMTMKGNMGQPIDHSLETLLNAGNYRDRIRFITVPRTKGVKERTD FEGAKWEVSSPETTMDCSAAGYFFARQLTETLHLPVGLVINSWGGSRIEAWMTEETLASVKGANIEAAKNPKLDTNSRLQ CLYNIMLLPVKNYTARGFLWYQGESNLFNYQIYAPMMTAMVQLWRNVWETPDMPFYYVQIAPHKYGNSRNINSALLQEAQ MKALQTIPNSGMIPTIDVGDEFCIHPPQKNVVGLRLANLALTKTYGLHKFPSTGPMMTKVEYSKNKAIVTLDNAPSGLAP GNCELEGFEIAGADKKFYPAKARIAGRTRNVEVWSDQVAQPVAVRYAFRNYVGNITLRNTLGIAAFPFRTDTWDDVK >Mature_477_residues MKKHFLIFTISLLFFSLAQGKVKLPAMMGDHMVLQQNSSVKLWGWADGKKVTVTTSWNNRTYKVSTDDEGAWLVKVDTPA GSFTPYSITISDGIRVTLSDILIGEVWICSGQSNMEMTMKGNMGQPIDHSLETLLNAGNYRDRIRFITVPRTKGVKERTD FEGAKWEVSSPETTMDCSAAGYFFARQLTETLHLPVGLVINSWGGSRIEAWMTEETLASVKGANIEAAKNPKLDTNSRLQ CLYNIMLLPVKNYTARGFLWYQGESNLFNYQIYAPMMTAMVQLWRNVWETPDMPFYYVQIAPHKYGNSRNINSALLQEAQ MKALQTIPNSGMIPTIDVGDEFCIHPPQKNVVGLRLANLALTKTYGLHKFPSTGPMMTKVEYSKNKAIVTLDNAPSGLAP GNCELEGFEIAGADKKFYPAKARIAGRTRNVEVWSDQVAQPVAVRYAFRNYVGNITLRNTLGIAAFPFRTDTWDDVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI24850115, Length=405, Percent_Identity=28.641975308642, Blast_Score=136, Evalue=5e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53440; Mature: 53440
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKHFLIFTISLLFFSLAQGKVKLPAMMGDHMVLQQNSSVKLWGWADGKKVTVTTSWNNR CCCEEEEEEHHHHHHHHCCCCEEECEECCCEEEEECCCCEEEEEECCCCEEEEEEECCCE TYKVSTDDEGAWLVKVDTPAGSFTPYSITISDGIRVTLSDILIGEVWICSGQSNMEMTMK EEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCEEEEEEEEEEEEEEECCCCCEEEEEE GNMGQPIDHSLETLLNAGNYRDRIRFITVPRTKGVKERTDFEGAKWEVSSPETTMDCSAA CCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCHH GYFFARQLTETLHLPVGLVINSWGGSRIEAWMTEETLASVKGANIEAAKNPKLDTNSRLQ HHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECHHHHHHHCCCCEEECCCCCCCCCCHHH CLYNIMLLPVKNYTARGFLWYQGESNLFNYQIYAPMMTAMVQLWRNVWETPDMPFYYVQI EEEEEEEEEECCCCCCEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEE APHKYGNSRNINSALLQEAQMKALQTIPNSGMIPTIDVGDEFCIHPPQKNVVGLRLANLA EEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEECCCCCCEEEEEEEEEE LTKTYGLHKFPSTGPMMTKVEYSKNKAIVTLDNAPSGLAPGNCELEGFEIAGADKKFYPA EEEECCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCC KARIAGRTRNVEVWSDQVAQPVAVRYAFRNYVGNITLRNTLGIAAFPFRTDTWDDVK CEEECCCCCCEEECHHHCCCHHHHHHHHHHHHCCEEEECCCCEEEECCCCCCCCCCC >Mature Secondary Structure MKKHFLIFTISLLFFSLAQGKVKLPAMMGDHMVLQQNSSVKLWGWADGKKVTVTTSWNNR CCCEEEEEEHHHHHHHHCCCCEEECEECCCEEEEECCCCEEEEEECCCCEEEEEEECCCE TYKVSTDDEGAWLVKVDTPAGSFTPYSITISDGIRVTLSDILIGEVWICSGQSNMEMTMK EEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCEEEEEEEEEEEEEEECCCCCEEEEEE GNMGQPIDHSLETLLNAGNYRDRIRFITVPRTKGVKERTDFEGAKWEVSSPETTMDCSAA CCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCHH GYFFARQLTETLHLPVGLVINSWGGSRIEAWMTEETLASVKGANIEAAKNPKLDTNSRLQ HHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECHHHHHHHCCCCEEECCCCCCCCCCHHH CLYNIMLLPVKNYTARGFLWYQGESNLFNYQIYAPMMTAMVQLWRNVWETPDMPFYYVQI EEEEEEEEEECCCCCCEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEE APHKYGNSRNINSALLQEAQMKALQTIPNSGMIPTIDVGDEFCIHPPQKNVVGLRLANLA EEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEECCCCCCEEEEEEEEEE LTKTYGLHKFPSTGPMMTKVEYSKNKAIVTLDNAPSGLAPGNCELEGFEIAGADKKFYPA EEEECCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCC KARIAGRTRNVEVWSDQVAQPVAVRYAFRNYVGNITLRNTLGIAAFPFRTDTWDDVK CEEECCCCCCEEECHHHCCCHHHHHHHHHHHHCCEEEECCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA