Click here to switch to the map view.

The map label for this gene is 29348562

Identifier: 29348562

GI number: 29348562

Start: 4017138

End: 4017482

Strand: Reverse

Name: 29348562

Synonym: BT_3153

Alternate gene names: NA

Gene position: 4017482-4017138 (Counterclockwise)

Preceding gene: 29348563

Following gene: 29348561

Centisome position: 64.17

GC content: 33.91

Gene sequence:

>345_bases
ATGAAACGGGCAATATTGCGAAATACTCAATTATTTGCATGTTTCGTAAACATTTTGAGGCTATTGTTCCTTTTTCTGAA
ATTATTTTCGTACTTTTGCAAGTGTATTTACCTATTTTATATATATAGTATGGCAAAGAAAGATGTAAACAGATTGAAAA
TAATGTTGGCAGTAACCAAGCGCTCAAACAAGTGGTTGGCAGAAATGTTGGGTAAAGACCAAGCAACCATTTCTAAATGG
TGCACCAACACTTGCCAACCAGACTTGGAAACCTTAATACGGATTTCTGATTTGCTGAAAGTGGATGTAAACGATTTGTT
GAATAAAGAATGTATCAAAGAATGA

Upstream 100 bases:

>100_bases
CTGTATTTTGCAATATGCAAAGAACGCCTTCAAATATATATGCAAAGATAAATCTAATTTTCCAAAAAACACCTTTTTTA
CTTTGTTTTTATGATTATTT

Downstream 100 bases:

>100_bases
TGGACGATATATTGAAACAGATAAAGGCTGGCGAGGTGTCGGGGGTGCAGTTCAAGGAACGCATTCTCGACAAATATGAT
ATTGCCTGTGAGTTAGTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MKRAILRNTQLFACFVNILRLLFLFLKLFSYFCKCIYLFYIYSMAKKDVNRLKIMLAVTKRSNKWLAEMLGKDQATISKW
CTNTCQPDLETLIRISDLLKVDVNDLLNKECIKE

Sequences:

>Translated_114_residues
MKRAILRNTQLFACFVNILRLLFLFLKLFSYFCKCIYLFYIYSMAKKDVNRLKIMLAVTKRSNKWLAEMLGKDQATISKW
CTNTCQPDLETLIRISDLLKVDVNDLLNKECIKE
>Mature_114_residues
MKRAILRNTQLFACFVNILRLLFLFLKLFSYFCKCIYLFYIYSMAKKDVNRLKIMLAVTKRSNKWLAEMLGKDQATISKW
CTNTCQPDLETLIRISDLLKVDVNDLLNKECIKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13497; Mature: 13497

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
5.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRAILRNTQLFACFVNILRLLFLFLKLFSYFCKCIYLFYIYSMAKKDVNRLKIMLAVTK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSNKWLAEMLGKDQATISKWCTNTCQPDLETLIRISDLLKVDVNDLLNKECIKE
CCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRAILRNTQLFACFVNILRLLFLFLKLFSYFCKCIYLFYIYSMAKKDVNRLKIMLAVTK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSNKWLAEMLGKDQATISKWCTNTCQPDLETLIRISDLLKVDVNDLLNKECIKE
CCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA