| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348554
Identifier: 29348554
GI number: 29348554
Start: 4010022
End: 4010450
Strand: Reverse
Name: 29348554
Synonym: BT_3145
Alternate gene names: NA
Gene position: 4010450-4010022 (Counterclockwise)
Preceding gene: 29348555
Following gene: 29348549
Centisome position: 64.06
GC content: 44.76
Gene sequence:
>429_bases ATGGAAAATAAAAAGAATGACAATCAGCAACCAACAGTTGCATCGGCTCATCACCCTTTCTATCTCGGGGAAATGAAAAA GGGGATGTTCGCCTGCTGGACCGTTACCACGCAATGCTGTGACGATACGAAAGTTACAATCCTTGACGATACGGGTAAGG TTTATGCCACCTATACCAAGGCTTTCACGCAAAGCCATAACCTGACATTGCTGGGACAGGGCAACGCTATAATCGAAGGA AATGAACTGAGGGTATACGTTGATTCCTCTATGTCGTCACAATTGATAGCGAGTACCAACACGCACTTAATAAATGACCT CAATGCCCGAAAAGTGGGAGCTGTCACAGACATCTGCATAGAAGACCAGACGGACAACGATTTTAATGATGTTTACATCA ATGTAGTGGCGTGGAACAAGAAAGGCTGA
Upstream 100 bases:
>100_bases GACAAAATAGACGAGGACAAGGCTGTGGAGATATTCAACACCGCCATGAACTATGAACTGAAAGTATTCACATCATCAAC CATCCTAACAACTATAGAAA
Downstream 100 bases:
>100_bases TTTTCGTCTTCCACAAAACGATTGAAAAAAAACAAGCTAGGGGAGACTGTCTGAAAAGATGCAGTCCCCCCTAAATTCCG CAACTTTTTAATTTAAGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MENKKNDNQQPTVASAHHPFYLGEMKKGMFACWTVTTQCCDDTKVTILDDTGKVYATYTKAFTQSHNLTLLGQGNAIIEG NELRVYVDSSMSSQLIASTNTHLINDLNARKVGAVTDICIEDQTDNDFNDVYINVVAWNKKG
Sequences:
>Translated_142_residues MENKKNDNQQPTVASAHHPFYLGEMKKGMFACWTVTTQCCDDTKVTILDDTGKVYATYTKAFTQSHNLTLLGQGNAIIEG NELRVYVDSSMSSQLIASTNTHLINDLNARKVGAVTDICIEDQTDNDFNDVYINVVAWNKKG >Mature_142_residues MENKKNDNQQPTVASAHHPFYLGEMKKGMFACWTVTTQCCDDTKVTILDDTGKVYATYTKAFTQSHNLTLLGQGNAIIEG NELRVYVDSSMSSQLIASTNTHLINDLNARKVGAVTDICIEDQTDNDFNDVYINVVAWNKKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15784; Mature: 15784
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENKKNDNQQPTVASAHHPFYLGEMKKGMFACWTVTTQCCDDTKVTILDDTGKVYATYTK CCCCCCCCCCCEEECCCCCEEEECCCCCEEEEEEEEECCCCCCEEEEEECCCCEEEEEEE AFTQSHNLTLLGQGNAIIEGNELRVYVDSSMSSQLIASTNTHLINDLNARKVGAVTDICI HHCCCCCEEEEECCCEEEECCEEEEEECCCCCCEEEECCCCEEECCCCCCCCCCEEEEEE EDQTDNDFNDVYINVVAWNKKG ECCCCCCCCEEEEEEEEECCCC >Mature Secondary Structure MENKKNDNQQPTVASAHHPFYLGEMKKGMFACWTVTTQCCDDTKVTILDDTGKVYATYTK CCCCCCCCCCCEEECCCCCEEEECCCCCEEEEEEEEECCCCCCEEEEEECCCCEEEEEEE AFTQSHNLTLLGQGNAIIEGNELRVYVDSSMSSQLIASTNTHLINDLNARKVGAVTDICI HHCCCCCEEEEECCCEEEECCEEEEEECCCCCCEEEECCCCEEECCCCCCCCCCEEEEEE EDQTDNDFNDVYINVVAWNKKG ECCCCCCCCEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA