Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348500

Identifier: 29348500

GI number: 29348500

Start: 3924010

End: 3925662

Strand: Reverse

Name: 29348500

Synonym: BT_3091

Alternate gene names: NA

Gene position: 3925662-3924010 (Counterclockwise)

Preceding gene: 29348501

Following gene: 29348499

Centisome position: 62.71

GC content: 46.28

Gene sequence:

>1653_bases
ATGAGAAAGATTATTTTGATTTTCGTGACAATTGTTCTTCCCTGTTTGCTTTGCGCAAGAAATGATGATAAGAGTACAGA
TATGCTGCTTCGTGAGATTGACGGAATTATCAGGAACCGTCAGACTTACGGTGCAGAAAAAGAAGCACGTATCTCCGATT
TGAAGAAGTTGCTGTCCGAGGCTACCTCCGATGAGCAGCGTTATGGATTTTGCGGCAGGCTTTTCGACGAATATCGGGCT
TATAATCTGGACTCTTCGTATGTATATGCACAGCGGAAGCAGGAACTGGCTTCTCATTTGAACAAACAGGATTATCTGGA
TGATGCCGCCATGAATATGGCAGAGGTGATGGGAACCACCGGAATGTACAAGGAAGCTTTGGAGCAGTTGGGACAGATAG
ACAAGAAAACCCTGTCTGATTATCTCTATCCCTATTATTACCACTTGTATCGTACTATTTACGGGTTGATGGGAGATTAT
GCCGTTACTGAGAAAGAGAAGAAAGAGTATTACCGGATGACGGACCTGTATCGGGATTCCCTTTTACAGACTAATGCCTC
CGACTCATTGGGTCATGTGCTGGTGATGGCCGACAAATGCACCGTACACGCCCAATATGATCAGGCAATAACCATGCTGA
CCGACTTCTACCGGAAACCCTCTCTGGACGATCATTCCAAGGCGATGATTACTTATACCTTGTCAGAAGCCTATCGCCTC
AAAGGAGACAAGAAAGGGCAGAAACACTTTCTGGCTCTCTCGGCCATCGCCGATTTAAAATCGGCAGTCAAGGAATACGT
CTCCCTGCGGAAACTCGCCTCTCTTGTATATGAAGACGGAGACATTGACCGTGCATACAACTATCTGAAATGCTCGCTCG
AAGATGCTACGCTCTGCAACGCCCGCCTTCGTACACTGGAAATCTCGCAAGTCTTCCCCATCATCGATCAGGCTTACCAG
CTGAAAACCAAGCGGCAGCAACAGGAAATGAAGATATCTCTGATTTGTATCAGTCTGCTTTCCGTCTTTTTGCTGGTGGC
TATATTCTTCGTTTACAAGCAGATGAAGAAAGTGGCTGCCGCCCGTCGGGAAGTGATTGACACGAATACGCTTCTGCAAG
AGCTGAATGGTGAACTTCATGACTCCAATTCGCAACTGAAAGAGATGAACCATACCCTTTCGGAAGCTAACTATATTAAA
GAGGAATACATCGGCCGCTACATGGACCAGTGTTCCACCTATCTGGATAAGATGGACTTATACCGTCGTTCTCTGAATAA
GATTGCGGCTGCCGGCAGGGTAGAAGAGTTGTATAAAGCTATTAAATCCTCCCAATTCCTCGAAGAAGAGCTGAAAGACT
TCTACGCAAACTTTGATATGACCTTCCTGCAACTCTTCCCTAACTTTGTGGAAGAGTTTAATGCGTTACTTGTCGAACCG
ATGCAGCCCAAGCAGGGCGAACTGCTGAATACCGAACTTCGTATCTTTGCCCTGATTCGTCTGGGGATTACGGATAGTAC
CAAGATCGCCCAGTTCCTCCGCTACTCTGTGACCACTATTTATAATTACCGGACACGTGTCCGCAACAAGGCACTCGGCG
AACGGGATGAGTTTGAGGCTAAAGTAATGAAAATAGGGAAGGTGGAAGAGTAA

Upstream 100 bases:

>100_bases
TCGGACACGTTTTTATTCCCAAGACTTGCAATAATTTCTCAAAGAAGGCTGTCGGTTTCTGAAAGACTTTTATCTTTGCA
GATATAATACATATGGCGCT

Downstream 100 bases:

>100_bases
GAAATCCACTACTTTTTTAGCACGGTCGCTATTCTATAATATTCTTATTATTAGTGTTTTATGCTGTTTTGTACTGTATA
AACCACTATATTTTTGCTAT

Product: putative regulatory protein

Products: NA

Alternate protein names: Transcriptional Regulator; Regulatory Protein

Number of amino acids: Translated: 550; Mature: 550

Protein sequence:

>550_residues
MRKIILIFVTIVLPCLLCARNDDKSTDMLLREIDGIIRNRQTYGAEKEARISDLKKLLSEATSDEQRYGFCGRLFDEYRA
YNLDSSYVYAQRKQELASHLNKQDYLDDAAMNMAEVMGTTGMYKEALEQLGQIDKKTLSDYLYPYYYHLYRTIYGLMGDY
AVTEKEKKEYYRMTDLYRDSLLQTNASDSLGHVLVMADKCTVHAQYDQAITMLTDFYRKPSLDDHSKAMITYTLSEAYRL
KGDKKGQKHFLALSAIADLKSAVKEYVSLRKLASLVYEDGDIDRAYNYLKCSLEDATLCNARLRTLEISQVFPIIDQAYQ
LKTKRQQQEMKISLICISLLSVFLLVAIFFVYKQMKKVAAARREVIDTNTLLQELNGELHDSNSQLKEMNHTLSEANYIK
EEYIGRYMDQCSTYLDKMDLYRRSLNKIAAAGRVEELYKAIKSSQFLEEELKDFYANFDMTFLQLFPNFVEEFNALLVEP
MQPKQGELLNTELRIFALIRLGITDSTKIAQFLRYSVTTIYNYRTRVRNKALGERDEFEAKVMKIGKVEE

Sequences:

>Translated_550_residues
MRKIILIFVTIVLPCLLCARNDDKSTDMLLREIDGIIRNRQTYGAEKEARISDLKKLLSEATSDEQRYGFCGRLFDEYRA
YNLDSSYVYAQRKQELASHLNKQDYLDDAAMNMAEVMGTTGMYKEALEQLGQIDKKTLSDYLYPYYYHLYRTIYGLMGDY
AVTEKEKKEYYRMTDLYRDSLLQTNASDSLGHVLVMADKCTVHAQYDQAITMLTDFYRKPSLDDHSKAMITYTLSEAYRL
KGDKKGQKHFLALSAIADLKSAVKEYVSLRKLASLVYEDGDIDRAYNYLKCSLEDATLCNARLRTLEISQVFPIIDQAYQ
LKTKRQQQEMKISLICISLLSVFLLVAIFFVYKQMKKVAAARREVIDTNTLLQELNGELHDSNSQLKEMNHTLSEANYIK
EEYIGRYMDQCSTYLDKMDLYRRSLNKIAAAGRVEELYKAIKSSQFLEEELKDFYANFDMTFLQLFPNFVEEFNALLVEP
MQPKQGELLNTELRIFALIRLGITDSTKIAQFLRYSVTTIYNYRTRVRNKALGERDEFEAKVMKIGKVEE
>Mature_550_residues
MRKIILIFVTIVLPCLLCARNDDKSTDMLLREIDGIIRNRQTYGAEKEARISDLKKLLSEATSDEQRYGFCGRLFDEYRA
YNLDSSYVYAQRKQELASHLNKQDYLDDAAMNMAEVMGTTGMYKEALEQLGQIDKKTLSDYLYPYYYHLYRTIYGLMGDY
AVTEKEKKEYYRMTDLYRDSLLQTNASDSLGHVLVMADKCTVHAQYDQAITMLTDFYRKPSLDDHSKAMITYTLSEAYRL
KGDKKGQKHFLALSAIADLKSAVKEYVSLRKLASLVYEDGDIDRAYNYLKCSLEDATLCNARLRTLEISQVFPIIDQAYQ
LKTKRQQQEMKISLICISLLSVFLLVAIFFVYKQMKKVAAARREVIDTNTLLQELNGELHDSNSQLKEMNHTLSEANYIK
EEYIGRYMDQCSTYLDKMDLYRRSLNKIAAAGRVEELYKAIKSSQFLEEELKDFYANFDMTFLQLFPNFVEEFNALLVEP
MQPKQGELLNTELRIFALIRLGITDSTKIAQFLRYSVTTIYNYRTRVRNKALGERDEFEAKVMKIGKVEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63974; Mature: 63974

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIILIFVTIVLPCLLCARNDDKSTDMLLREIDGIIRNRQTYGAEKEARISDLKKLLSE
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHH
ATSDEQRYGFCGRLFDEYRAYNLDSSYVYAQRKQELASHLNKQDYLDDAAMNMAEVMGTT
CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
GMYKEALEQLGQIDKKTLSDYLYPYYYHLYRTIYGLMGDYAVTEKEKKEYYRMTDLYRDS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHHHHHHHHHHHHHH
LLQTNASDSLGHVLVMADKCTVHAQYDQAITMLTDFYRKPSLDDHSKAMITYTLSEAYRL
HHHCCCCCCCCEEEEEECCCEEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHC
KGDKKGQKHFLALSAIADLKSAVKEYVSLRKLASLVYEDGDIDRAYNYLKCSLEDATLCN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHH
ARLRTLEISQVFPIIDQAYQLKTKRQQQEMKISLICISLLSVFLLVAIFFVYKQMKKVAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARREVIDTNTLLQELNGELHDSNSQLKEMNHTLSEANYIKEEYIGRYMDQCSTYLDKMDL
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRRSLNKIAAAGRVEELYKAIKSSQFLEEELKDFYANFDMTFLQLFPNFVEEFNALLVEP
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
MQPKQGELLNTELRIFALIRLGITDSTKIAQFLRYSVTTIYNYRTRVRNKALGERDEFEA
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
KVMKIGKVEE
HHHHHCCCCC
>Mature Secondary Structure
MRKIILIFVTIVLPCLLCARNDDKSTDMLLREIDGIIRNRQTYGAEKEARISDLKKLLSE
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHH
ATSDEQRYGFCGRLFDEYRAYNLDSSYVYAQRKQELASHLNKQDYLDDAAMNMAEVMGTT
CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
GMYKEALEQLGQIDKKTLSDYLYPYYYHLYRTIYGLMGDYAVTEKEKKEYYRMTDLYRDS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHHHHHHHHHHHHHH
LLQTNASDSLGHVLVMADKCTVHAQYDQAITMLTDFYRKPSLDDHSKAMITYTLSEAYRL
HHHCCCCCCCCEEEEEECCCEEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHC
KGDKKGQKHFLALSAIADLKSAVKEYVSLRKLASLVYEDGDIDRAYNYLKCSLEDATLCN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHH
ARLRTLEISQVFPIIDQAYQLKTKRQQQEMKISLICISLLSVFLLVAIFFVYKQMKKVAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARREVIDTNTLLQELNGELHDSNSQLKEMNHTLSEANYIKEEYIGRYMDQCSTYLDKMDL
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRRSLNKIAAAGRVEELYKAIKSSQFLEEELKDFYANFDMTFLQLFPNFVEEFNALLVEP
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
MQPKQGELLNTELRIFALIRLGITDSTKIAQFLRYSVTTIYNYRTRVRNKALGERDEFEA
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
KVMKIGKVEE
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA