| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348483
Identifier: 29348483
GI number: 29348483
Start: 3898132
End: 3899097
Strand: Reverse
Name: 29348483
Synonym: BT_3074
Alternate gene names: NA
Gene position: 3899097-3898132 (Counterclockwise)
Preceding gene: 29348484
Following gene: 29348481
Centisome position: 62.28
GC content: 43.06
Gene sequence:
>966_bases ATGGCTTTAGACTTATTTAAGCGAGTGGAAACCCGGAAGGGGTTGTTTGCTGTGGAGAAGATAACATTGATTTATAATCT GTTGACCTCCATTTTGATTCTGTTCCTGTTTCAGCGAATGGATCATCCATGGCACATGTTGCTGGATAGGGCGATGATCG CTGCAATGACTTTTCTGCTGATGTATCTTTATCGGCTGGCTCCTTGCAAGTTTTCGGCGTTTGTACGTGTTGCTATTCAG ATGAGCCTGCTTTCCTACTGGTATCCGGATACGTTTGAGTTTAACCGGTTCTTTCCGAATCTCGACCATGTGTTTGCTAT AACCGAGCAGTTTATCTTCAATGGGCAACCTGCTATCTGGTTCTGTCATACATTCCCGCATCTTTTGGTCAGTGAAGCAT TCAATATGGGATATTTCTTTTATTATCCGATGATGCTCATTGTGACGGTGTTTTATTTTATCTATAAGTTTGAATGGTTT GAGAAGATGTCGTTTGTACTGGTAACTTCTTTCTTTATCTATTATCTGATTTATATCTTTGTTCCGGTAGCAGGGCCGCA GTTCTACTTCCCAGCTATAGGTTTTGATAATGTATCTAAAGGAATTTTCCCGGCCATCGGCGATTATTTCAATAACAATC AGGAGTTACTTCCCGGTCCGGGCTATCAACATGGCTTCTTTTACAGTTTGGTAGAAGGTTCGCAGCAAGTGGGAGAGCGT CCTACGGCAGCTTTCCCCAGTTCGCATGTCGGTATTTCTACCATTCTTATGATTATGGCATGGCGTGGCAGTAAGAAGTT GTTTGCCTGTCTGATCCCTTTCTATATGCTGCTTTGCGGGGCTACAGTATATATTCAGGCGCACTACGTTATCGATGCGA TCGTAGGTTTCTTCTCTGCATTCTTGTTGTATGTTGTGGCGACGTGGATGTTCAAGAAGTGGTTTGCGCAGCCGATGTTT AAGTAA
Upstream 100 bases:
>100_bases AATGTGATATAACCCCTGCCATTAATGAGTTAGGGTATGCTCCCGAATATGACTTGGAGAAGGGAGTCCGTGAAACCATT GACTGGTATAAAAACGAAGG
Downstream 100 bases:
>100_bases AACTAATCTAAAAGAGAATTTACTTTTTCAGGAATTGTTTCGAATATCCGGAACAATTCTTCTTTCGTTTCTGCCCGCAA CATGGCAATACGAGTCTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphoesterase Pa-Phosphatase Related Protein; Transmembrane Protein
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MALDLFKRVETRKGLFAVEKITLIYNLLTSILILFLFQRMDHPWHMLLDRAMIAAMTFLLMYLYRLAPCKFSAFVRVAIQ MSLLSYWYPDTFEFNRFFPNLDHVFAITEQFIFNGQPAIWFCHTFPHLLVSEAFNMGYFFYYPMMLIVTVFYFIYKFEWF EKMSFVLVTSFFIYYLIYIFVPVAGPQFYFPAIGFDNVSKGIFPAIGDYFNNNQELLPGPGYQHGFFYSLVEGSQQVGER PTAAFPSSHVGISTILMIMAWRGSKKLFACLIPFYMLLCGATVYIQAHYVIDAIVGFFSAFLLYVVATWMFKKWFAQPMF K
Sequences:
>Translated_321_residues MALDLFKRVETRKGLFAVEKITLIYNLLTSILILFLFQRMDHPWHMLLDRAMIAAMTFLLMYLYRLAPCKFSAFVRVAIQ MSLLSYWYPDTFEFNRFFPNLDHVFAITEQFIFNGQPAIWFCHTFPHLLVSEAFNMGYFFYYPMMLIVTVFYFIYKFEWF EKMSFVLVTSFFIYYLIYIFVPVAGPQFYFPAIGFDNVSKGIFPAIGDYFNNNQELLPGPGYQHGFFYSLVEGSQQVGER PTAAFPSSHVGISTILMIMAWRGSKKLFACLIPFYMLLCGATVYIQAHYVIDAIVGFFSAFLLYVVATWMFKKWFAQPMF K >Mature_320_residues ALDLFKRVETRKGLFAVEKITLIYNLLTSILILFLFQRMDHPWHMLLDRAMIAAMTFLLMYLYRLAPCKFSAFVRVAIQM SLLSYWYPDTFEFNRFFPNLDHVFAITEQFIFNGQPAIWFCHTFPHLLVSEAFNMGYFFYYPMMLIVTVFYFIYKFEWFE KMSFVLVTSFFIYYLIYIFVPVAGPQFYFPAIGFDNVSKGIFPAIGDYFNNNQELLPGPGYQHGFFYSLVEGSQQVGERP TAAFPSSHVGISTILMIMAWRGSKKLFACLIPFYMLLCGATVYIQAHYVIDAIVGFFSAFLLYVVATWMFKKWFAQPMFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37700; Mature: 37569
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALDLFKRVETRKGLFAVEKITLIYNLLTSILILFLFQRMDHPWHMLLDRAMIAAMTFLL CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH MYLYRLAPCKFSAFVRVAIQMSLLSYWYPDTFEFNRFFPNLDHVFAITEQFIFNGQPAIW HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCEE FCHTFPHLLVSEAFNMGYFFYYPMMLIVTVFYFIYKFEWFEKMSFVLVTSFFIYYLIYIF EHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPVAGPQFYFPAIGFDNVSKGIFPAIGDYFNNNQELLPGPGYQHGFFYSLVEGSQQVGER HHCCCCCEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC PTAAFPSSHVGISTILMIMAWRGSKKLFACLIPFYMLLCGATVYIQAHYVIDAIVGFFSA CCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH FLLYVVATWMFKKWFAQPMFK HHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ALDLFKRVETRKGLFAVEKITLIYNLLTSILILFLFQRMDHPWHMLLDRAMIAAMTFLL CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH MYLYRLAPCKFSAFVRVAIQMSLLSYWYPDTFEFNRFFPNLDHVFAITEQFIFNGQPAIW HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCEE FCHTFPHLLVSEAFNMGYFFYYPMMLIVTVFYFIYKFEWFEKMSFVLVTSFFIYYLIYIF EHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPVAGPQFYFPAIGFDNVSKGIFPAIGDYFNNNQELLPGPGYQHGFFYSLVEGSQQVGER HHCCCCCEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC PTAAFPSSHVGISTILMIMAWRGSKKLFACLIPFYMLLCGATVYIQAHYVIDAIVGFFSA CCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH FLLYVVATWMFKKWFAQPMFK HHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA