Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348471

Identifier: 29348471

GI number: 29348471

Start: 3884488

End: 3884985

Strand: Reverse

Name: 29348471

Synonym: BT_3062

Alternate gene names: NA

Gene position: 3884985-3884488 (Counterclockwise)

Preceding gene: 29348473

Following gene: 29348470

Centisome position: 62.06

GC content: 47.79

Gene sequence:

>498_bases
ATGGCTTTAGAGTATGTAGTAACAAAAAGAGTGTTCGGTTTTGACAAGGACAAAAACGAAAAGTATGTAGCAAAGTCGGT
TCGTTCCGGCAGAGTAAGTTTTTCCAAGATGTGTGGCAAGGTGAGCCGTCTTTGTGGAGTTCACCGCAAGGTAGTGGATC
TGGTCGTCAGCGGTCTTGTCGATATGATGGCGGAGGACATTGACGACGGAAAGAGCGTTCAGATGGGTGAGTTCGGCATC
TTCAGCCCTACCATTCGCGCTAAGAGTGCGGATGACGAGAAGGAAGTATCATCTAAGTCAATCGTCCAAAGAAAGATCCT
TTTCTATCCTGGAAAAATATTCAAGACCACGTTGGATGATATGAGTATTACCCGTCGTGCGGAGTTGGATACGGACTATA
CGGACGGAAGTAGTAACAATGGTAGCGGCAGTGAGAAACCTAATCCCGGTGGGGACGGAGGCAAAGATGACGAAGAAGCC
CCGGACCCGACTGTATAA

Upstream 100 bases:

>100_bases
GACGGTTTGCGCCCTGTTATATCTTTGCAGAGTCATTCAGACAAAACGGAATGGCAAACAGATAACCTTTATTTTTTTAA
CCATTTAAACTTTAACAATT

Downstream 100 bases:

>100_bases
GTCTTTTGTACTTTCCTTTTAGATATTAGTCAGAGCGGGAAAGGCTTATTGAGAAGTAGTAAATGCACAGATGATCGGTT
ATACTCGATTTTCTGTGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MALEYVVTKRVFGFDKDKNEKYVAKSVRSGRVSFSKMCGKVSRLCGVHRKVVDLVVSGLVDMMAEDIDDGKSVQMGEFGI
FSPTIRAKSADDEKEVSSKSIVQRKILFYPGKIFKTTLDDMSITRRAELDTDYTDGSSNNGSGSEKPNPGGDGGKDDEEA
PDPTV

Sequences:

>Translated_165_residues
MALEYVVTKRVFGFDKDKNEKYVAKSVRSGRVSFSKMCGKVSRLCGVHRKVVDLVVSGLVDMMAEDIDDGKSVQMGEFGI
FSPTIRAKSADDEKEVSSKSIVQRKILFYPGKIFKTTLDDMSITRRAELDTDYTDGSSNNGSGSEKPNPGGDGGKDDEEA
PDPTV
>Mature_164_residues
ALEYVVTKRVFGFDKDKNEKYVAKSVRSGRVSFSKMCGKVSRLCGVHRKVVDLVVSGLVDMMAEDIDDGKSVQMGEFGIF
SPTIRAKSADDEKEVSSKSIVQRKILFYPGKIFKTTLDDMSITRRAELDTDYTDGSSNNGSGSEKPNPGGDGGKDDEEAP
DPTV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18043; Mature: 17912

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALEYVVTKRVFGFDKDKNEKYVAKSVRSGRVSFSKMCGKVSRLCGVHRKVVDLVVSGLV
CCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DMMAEDIDDGKSVQMGEFGIFSPTIRAKSADDEKEVSSKSIVQRKILFYPGKIFKTTLDD
HHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
MSITRRAELDTDYTDGSSNNGSGSEKPNPGGDGGKDDEEAPDPTV
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ALEYVVTKRVFGFDKDKNEKYVAKSVRSGRVSFSKMCGKVSRLCGVHRKVVDLVVSGLV
CHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DMMAEDIDDGKSVQMGEFGIFSPTIRAKSADDEKEVSSKSIVQRKILFYPGKIFKTTLDD
HHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
MSITRRAELDTDYTDGSSNNGSGSEKPNPGGDGGKDDEEAPDPTV
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA