Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348409

Identifier: 29348409

GI number: 29348409

Start: 3781733

End: 3782362

Strand: Reverse

Name: 29348409

Synonym: BT_3000

Alternate gene names: NA

Gene position: 3782362-3781733 (Counterclockwise)

Preceding gene: 29348410

Following gene: 29348384

Centisome position: 60.42

GC content: 43.17

Gene sequence:

>630_bases
ATGGAATACGGAATAGTTTATCTTCTGACAAACCCTGTGATGCCAGGACTTGTAAAAATAGGCATGACCACACAGGAAGG
CATTGATAAACGGATGAAGGAACTATATACCACAGGAGTTCCCATTCCGTTTGAGTGTAAATTTGCGTGCAAGGTCAAAA
AAAGTGATTGTCTCAAAATTGAAAAAGCCCTTCATAAAGCCTTTGACCCTCAGCGCATCAACCAGAACCGTGAGTTCTTC
CGTATCAACGTGGAGCAGGCACAAGCCATCCTCGAGCTTTTTCATCATGAAGATGTGACGGAAGAAGTGACGGATGAGAT
ACAGAATGACCTCACCGATGAGGATAAAGCTGCCAGCACAAAAGCACAAGCCAAACGTCCACCACTCAACTTCTATGAGA
TGGGGTTGCAGAAAGGCGATATTCTCATATGGAAAGATGACCCATCAATTTCTGTTACCGTTCTTTCAGAGCGTAAAGTG
TGTTATGAAGGAGAAGAAACTTCTATTAGTGCGCTTTCTGCTAAGCTAAAAGGATATAAGGTCAAGCATATACAGCCCAC
ACCGCACTGGTTTTTCAACGACCGTTCTCTAAGTGAAATCTACGACGAAACGTATCCATTTGAAGAGTGA

Upstream 100 bases:

>100_bases
TAACAAGAACGGCAACATACTGATGCGCGAATTTGAAAGAGTTCTTGATTTCATTATAAACAAAGACAAACTGTACAATA
GTCTCTAAAAAAACAACGAT

Downstream 100 bases:

>100_bases
AGGCATATATAGGCTGCCTCTAAGTTTACTCATGAGTGTGGCAAGGATATGCCAAGAGCAGGAGAAAAACGAAACAAAAA
AGATAAACGAAATATTCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MEYGIVYLLTNPVMPGLVKIGMTTQEGIDKRMKELYTTGVPIPFECKFACKVKKSDCLKIEKALHKAFDPQRINQNREFF
RINVEQAQAILELFHHEDVTEEVTDEIQNDLTDEDKAASTKAQAKRPPLNFYEMGLQKGDILIWKDDPSISVTVLSERKV
CYEGEETSISALSAKLKGYKVKHIQPTPHWFFNDRSLSEIYDETYPFEE

Sequences:

>Translated_209_residues
MEYGIVYLLTNPVMPGLVKIGMTTQEGIDKRMKELYTTGVPIPFECKFACKVKKSDCLKIEKALHKAFDPQRINQNREFF
RINVEQAQAILELFHHEDVTEEVTDEIQNDLTDEDKAASTKAQAKRPPLNFYEMGLQKGDILIWKDDPSISVTVLSERKV
CYEGEETSISALSAKLKGYKVKHIQPTPHWFFNDRSLSEIYDETYPFEE
>Mature_209_residues
MEYGIVYLLTNPVMPGLVKIGMTTQEGIDKRMKELYTTGVPIPFECKFACKVKKSDCLKIEKALHKAFDPQRINQNREFF
RINVEQAQAILELFHHEDVTEEVTDEIQNDLTDEDKAASTKAQAKRPPLNFYEMGLQKGDILIWKDDPSISVTVLSERKV
CYEGEETSISALSAKLKGYKVKHIQPTPHWFFNDRSLSEIYDETYPFEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24114; Mature: 24114

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYGIVYLLTNPVMPGLVKIGMTTQEGIDKRMKELYTTGVPIPFECKFACKVKKSDCLKI
CCCEEEEEEECCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHH
EKALHKAFDPQRINQNREFFRINVEQAQAILELFHHEDVTEEVTDEIQNDLTDEDKAAST
HHHHHHCCCHHHCCCCCEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHCC
KAQAKRPPLNFYEMGLQKGDILIWKDDPSISVTVLSERKVCYEGEETSISALSAKLKGYK
HHHHCCCCCCHHHHCCCCCCEEEEECCCCEEEEEEECCCEEECCCCCHHHHHHHHHCCEE
VKHIQPTPHWFFNDRSLSEIYDETYPFEE
EEEECCCCCEEECCCCHHHHHHHCCCCCC
>Mature Secondary Structure
MEYGIVYLLTNPVMPGLVKIGMTTQEGIDKRMKELYTTGVPIPFECKFACKVKKSDCLKI
CCCEEEEEEECCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHH
EKALHKAFDPQRINQNREFFRINVEQAQAILELFHHEDVTEEVTDEIQNDLTDEDKAAST
HHHHHHCCCHHHCCCCCEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHCC
KAQAKRPPLNFYEMGLQKGDILIWKDDPSISVTVLSERKVCYEGEETSISALSAKLKGYK
HHHHCCCCCCHHHHCCCCCCEEEEECCCCEEEEEEECCCEEECCCCCHHHHHHHHHCCEE
VKHIQPTPHWFFNDRSLSEIYDETYPFEE
EEEECCCCCEEECCCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA