| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348361
Identifier: 29348361
GI number: 29348361
Start: 3717066
End: 3720032
Strand: Reverse
Name: 29348361
Synonym: BT_2952
Alternate gene names: NA
Gene position: 3720032-3717066 (Counterclockwise)
Preceding gene: 29348362
Following gene: 29348360
Centisome position: 59.42
GC content: 42.47
Gene sequence:
>2967_bases ATGGAGAATTTAGCCATTTCATTTTTTGAACGAATAAAAGAACAGGTGACGCTGAGAACCATAAAATATTGCATTTTAAT GGCAGGTTTCCTGTGTGTATGTGTTCCTTCGCTTTACGGTGTAGAAAATCTGAACGTAACCGGAAAAGTCGTAGACTCCT CTGGTGAACCTCTGATTGGAGTATCTATCAAGGTAGAGAACAAAAATATGGGTACTACTACTGATATAAACGGAAACTTT ACGCTCGCTGACATCCCTAAAAATACGGTGCTTGTTCTTACATATATCGGGATGGAGACGCAAAAAGTAACGGTGACACA AAATAGGCTGAACATCGTTATGCGTGAAAACAGCGTACAACTGGAAGAGGTGGTAGCCATTGGCTATGGTACAGTGAAAA AAGAGGAGTTGACCAGTGCTGTCACTAAAGTAGGGGAAGAATCGTTTAATGCGGGGGTAACTACCAGTCCGATTAACTTG CTGAACGGCAAAGTACCGGGATTATCCATTCGCAATACAAGCGGAAATGACCCGAACGCATCACCGGAGATACATTTAAG AGGTATCGGATCTATCCGGGCAGGAAGTGCTCCGCTGATAATTGTCGACGGAACTTACAGTACCATGTCCGAGTTGCAGG CAATCAACGCTAATGATATCAAGTCCTTTAATGTTCTGAAAGATGGTTCGTCTGCCGCTATTTACGGTACACGAGGCAGT AATGGGGTTATCATCGTAGAAACCAAAAATGCGTCTAAAGGCAAAGCCAGTATCGAATATACCAGTTATTATTACACAGA AAGACCGGTGCGGAAACTGGAAATGATGTCTGCCGATGAATATATGGGATATTTGAAAGACAAAGGGCACTCCACCATCA ACAACGATTACGGCTTCTCAACCGACTGGACGGATCAGCTGATCCGAAATAATTTCAGTTATTACCAGGGAGTTTCTTTC TCAACAGGAACGGAGAACTCATCCATACGAGGCTCTGTCGGTTACCGGGATTCTGAAAGTATGGTAATCAACACTGGCAA TAAGCAACTGACGGGGAGAGTAAACTTCAAGCAGTATTTTTTCGACAAGAAGCTGACTATAGAAGGTACGTTGAACGGAG CAAACACTCAATCGGATTATACTGATTACGGAGCTTTCATGCAAGCTATCGTATATCATCCCACGGCACCTGTTTATAAT CAGGAAGGAAAATTCTTCGAATACGCAGGAGTAGGACCTTATAATCCGGTAGCCTTACTTTCGCAAGTAGATAACAGAGG AGAACGTTATACCTACTCCGGCAATCTGTCTGCTAATCTCAAAGTATTGCCTTGTCTGAGTGTATATGCTATGATGTCTG CCAACAACGATACCTACGAAGGTTCCAAATATATCAGCCGTGATTCTCGCTACAGTGTATTAGGAGGCTTTGAAGGGCAG GCAGATATGAATACTTATTTCTACAAGAAACGAACATTTGAAGCCTATGCCAATTACAGTTTCTCCACTGATGTACATAA TCTGACAGCTCTTGCCGGTTATTCATTCAACAGAGAAGACAGAACCTGGCACAATGCGTCCAACTCAGGATTCCTGACAG ATATTCCGGGAGCTAACAATATTGGTAATGGTACGTATCTGGAAGATGGACTTGCCTCAATGGGAAGGGGACAGGATGAA TCAAAGTTAATAGCTTTCTTCGGTCGTATCAACTATTCATATAAAGGTAAATATCTGTTCAATGCGAGTGTCAGACGCGA AGGTTCTACCCGCTTTGGAGAGAATCATAAATGGGGCTGGTTTCCTGCTGTCTCTGCCGGATGGAGAATATTGGAAGAAA ATTTCTTTAGTGATGCTACCCCGCTTAGCAACCTCAAACTACGTGTAGGCTTTGGTATCACCGGAAATCAGGATATTCCT TTATATGCTTCCATAGCCAAATACAATGATCTCGGATATGCTTACTATAATGGAAAATGGGACAAAGTTTATGGTCCTGT CAGCAACCCGAATCCCGACTTGAAATGGGAGAAGAACGCTGAATACAACGCAGGTGTCGATTTCGGAATATGGAACGACA GGCTGACGGCAAGTGTAGATTACTATTATCGTAAAACCACTGATCTGCTGGATTGGTATGATGCGCAAATGCCTTCAAAT ATATACAGTACGATATTTACCAATGTAGGTACACTGACCAATCAAGGTATTGAATTTGCTATCGGGTATGATGTAATTCG CAACAAAGAACTGAAATGGCATCTTGACGGAGGATTCTCATACAATGAGAATAAATTGGTCTCCTTGGCAAACAGTTCTT ACCGTGCCAATCACATCACTTACAATCCTCTTTCTTCACCTGCCAACGGTCAGACTACGTATATACTGGAAGAAGGCAAA CCCATTGGTACGTACTACGGATTAAAATACAGAGGTTTCAACAGTGCCGGTAAATGGGTATTTGAGGACAGGGATGAGGA CGGTGCTTATTCGGATAAAGACTACACTTATTTGGGCAACGGACTTCCAAAATGGTATTTCAATCTGGCCAGTACATTGA CCTGGAAAGATTTTGATTTCTCTTTCCAACTTCGGGGTGCAGCCGGATTTAAGGTCCTGAATACCAAACGGATTTATTAC GAGAACTCGGTGTCTTTACCTTTCAATCTATTGAAATCCGCATTGGGCAGACCTTTGAATGACGCTGCCACTTTTTCTGA TTATTATCTGGAGAAAGGTAATTATTTGAAGTTAGACAACATAACTGTAGGGTATACGTTCGATTTGTCCCAATTGAAAT ATGTGTCAAATGCCCGGATTTATGCCACCGCCACCAATTTGCTGACCATAACCGGATATACAGGAGTTGATCCGGAAGTA GGTACAGGGCTCACGCCCGGATTCGATGATTCCGGTTACTATCCGCGTTCTACAACTCTTATGCTAGGTTTAAACATTAA ATTTTGA
Upstream 100 bases:
>100_bases TGGTATGTCTCATCGGAGGAGTGGTGGTGATTGCCCTCTAACGACTATACTTAACTATTTATATTGACTTAATTATTATG TTATTCAAAAAGTCTAACTT
Downstream 100 bases:
>100_bases TTCACATGAAAAAGATTATCTATTTTATAACATTGCTTTTTCTGGTTGGTTGCGTCGACTTATCCGAAAATATGTATAAT GATTTGGGTAAAGATAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 988; Mature: 988
Protein sequence:
>988_residues MENLAISFFERIKEQVTLRTIKYCILMAGFLCVCVPSLYGVENLNVTGKVVDSSGEPLIGVSIKVENKNMGTTTDINGNF TLADIPKNTVLVLTYIGMETQKVTVTQNRLNIVMRENSVQLEEVVAIGYGTVKKEELTSAVTKVGEESFNAGVTTSPINL LNGKVPGLSIRNTSGNDPNASPEIHLRGIGSIRAGSAPLIIVDGTYSTMSELQAINANDIKSFNVLKDGSSAAIYGTRGS NGVIIVETKNASKGKASIEYTSYYYTERPVRKLEMMSADEYMGYLKDKGHSTINNDYGFSTDWTDQLIRNNFSYYQGVSF STGTENSSIRGSVGYRDSESMVINTGNKQLTGRVNFKQYFFDKKLTIEGTLNGANTQSDYTDYGAFMQAIVYHPTAPVYN QEGKFFEYAGVGPYNPVALLSQVDNRGERYTYSGNLSANLKVLPCLSVYAMMSANNDTYEGSKYISRDSRYSVLGGFEGQ ADMNTYFYKKRTFEAYANYSFSTDVHNLTALAGYSFNREDRTWHNASNSGFLTDIPGANNIGNGTYLEDGLASMGRGQDE SKLIAFFGRINYSYKGKYLFNASVRREGSTRFGENHKWGWFPAVSAGWRILEENFFSDATPLSNLKLRVGFGITGNQDIP LYASIAKYNDLGYAYYNGKWDKVYGPVSNPNPDLKWEKNAEYNAGVDFGIWNDRLTASVDYYYRKTTDLLDWYDAQMPSN IYSTIFTNVGTLTNQGIEFAIGYDVIRNKELKWHLDGGFSYNENKLVSLANSSYRANHITYNPLSSPANGQTTYILEEGK PIGTYYGLKYRGFNSAGKWVFEDRDEDGAYSDKDYTYLGNGLPKWYFNLASTLTWKDFDFSFQLRGAAGFKVLNTKRIYY ENSVSLPFNLLKSALGRPLNDAATFSDYYLEKGNYLKLDNITVGYTFDLSQLKYVSNARIYATATNLLTITGYTGVDPEV GTGLTPGFDDSGYYPRSTTLMLGLNIKF
Sequences:
>Translated_988_residues MENLAISFFERIKEQVTLRTIKYCILMAGFLCVCVPSLYGVENLNVTGKVVDSSGEPLIGVSIKVENKNMGTTTDINGNF TLADIPKNTVLVLTYIGMETQKVTVTQNRLNIVMRENSVQLEEVVAIGYGTVKKEELTSAVTKVGEESFNAGVTTSPINL LNGKVPGLSIRNTSGNDPNASPEIHLRGIGSIRAGSAPLIIVDGTYSTMSELQAINANDIKSFNVLKDGSSAAIYGTRGS NGVIIVETKNASKGKASIEYTSYYYTERPVRKLEMMSADEYMGYLKDKGHSTINNDYGFSTDWTDQLIRNNFSYYQGVSF STGTENSSIRGSVGYRDSESMVINTGNKQLTGRVNFKQYFFDKKLTIEGTLNGANTQSDYTDYGAFMQAIVYHPTAPVYN QEGKFFEYAGVGPYNPVALLSQVDNRGERYTYSGNLSANLKVLPCLSVYAMMSANNDTYEGSKYISRDSRYSVLGGFEGQ ADMNTYFYKKRTFEAYANYSFSTDVHNLTALAGYSFNREDRTWHNASNSGFLTDIPGANNIGNGTYLEDGLASMGRGQDE SKLIAFFGRINYSYKGKYLFNASVRREGSTRFGENHKWGWFPAVSAGWRILEENFFSDATPLSNLKLRVGFGITGNQDIP LYASIAKYNDLGYAYYNGKWDKVYGPVSNPNPDLKWEKNAEYNAGVDFGIWNDRLTASVDYYYRKTTDLLDWYDAQMPSN IYSTIFTNVGTLTNQGIEFAIGYDVIRNKELKWHLDGGFSYNENKLVSLANSSYRANHITYNPLSSPANGQTTYILEEGK PIGTYYGLKYRGFNSAGKWVFEDRDEDGAYSDKDYTYLGNGLPKWYFNLASTLTWKDFDFSFQLRGAAGFKVLNTKRIYY ENSVSLPFNLLKSALGRPLNDAATFSDYYLEKGNYLKLDNITVGYTFDLSQLKYVSNARIYATATNLLTITGYTGVDPEV GTGLTPGFDDSGYYPRSTTLMLGLNIKF >Mature_988_residues MENLAISFFERIKEQVTLRTIKYCILMAGFLCVCVPSLYGVENLNVTGKVVDSSGEPLIGVSIKVENKNMGTTTDINGNF TLADIPKNTVLVLTYIGMETQKVTVTQNRLNIVMRENSVQLEEVVAIGYGTVKKEELTSAVTKVGEESFNAGVTTSPINL LNGKVPGLSIRNTSGNDPNASPEIHLRGIGSIRAGSAPLIIVDGTYSTMSELQAINANDIKSFNVLKDGSSAAIYGTRGS NGVIIVETKNASKGKASIEYTSYYYTERPVRKLEMMSADEYMGYLKDKGHSTINNDYGFSTDWTDQLIRNNFSYYQGVSF STGTENSSIRGSVGYRDSESMVINTGNKQLTGRVNFKQYFFDKKLTIEGTLNGANTQSDYTDYGAFMQAIVYHPTAPVYN QEGKFFEYAGVGPYNPVALLSQVDNRGERYTYSGNLSANLKVLPCLSVYAMMSANNDTYEGSKYISRDSRYSVLGGFEGQ ADMNTYFYKKRTFEAYANYSFSTDVHNLTALAGYSFNREDRTWHNASNSGFLTDIPGANNIGNGTYLEDGLASMGRGQDE SKLIAFFGRINYSYKGKYLFNASVRREGSTRFGENHKWGWFPAVSAGWRILEENFFSDATPLSNLKLRVGFGITGNQDIP LYASIAKYNDLGYAYYNGKWDKVYGPVSNPNPDLKWEKNAEYNAGVDFGIWNDRLTASVDYYYRKTTDLLDWYDAQMPSN IYSTIFTNVGTLTNQGIEFAIGYDVIRNKELKWHLDGGFSYNENKLVSLANSSYRANHITYNPLSSPANGQTTYILEEGK PIGTYYGLKYRGFNSAGKWVFEDRDEDGAYSDKDYTYLGNGLPKWYFNLASTLTWKDFDFSFQLRGAAGFKVLNTKRIYY ENSVSLPFNLLKSALGRPLNDAATFSDYYLEKGNYLKLDNITVGYTFDLSQLKYVSNARIYATATNLLTITGYTGVDPEV GTGLTPGFDDSGYYPRSTTLMLGLNIKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 110159; Mature: 110159
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENLAISFFERIKEQVTLRTIKYCILMAGFLCVCVPSLYGVENLNVTGKVVDSSGEPLIG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEE VSIKVENKNMGTTTDINGNFTLADIPKNTVLVLTYIGMETQKVTVTQNRLNIVMRENSVQ EEEEEECCCCCCEEECCCCEEEEECCCCEEEEEEEECCCEEEEEEEECEEEEEEECCCCC LEEVVAIGYGTVKKEELTSAVTKVGEESFNAGVTTSPINLLNGKVPGLSIRNTSGNDPNA EEHEEEECCCCCCHHHHHHHHHHHCHHHCCCCCCCCCHHHHCCCCCCEEEECCCCCCCCC SPEIHLRGIGSIRAGSAPLIIVDGTYSTMSELQAINANDIKSFNVLKDGSSAAIYGTRGS CCEEEEEECCCEECCCCCEEEECCCHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCC NGVIIVETKNASKGKASIEYTSYYYTERPVRKLEMMSADEYMGYLKDKGHSTINNDYGFS CCEEEEEECCCCCCCEEEEEEEEEECCCCHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCC TDWTDQLIRNNFSYYQGVSFSTGTENSSIRGSVGYRDSESMVINTGNKQLTGRVNFKQYF CCHHHHHHHCCCCHHCCCEECCCCCCCCEEEECCCCCCCCEEEECCCCEEEEEECHHHHH FDKKLTIEGTLNGANTQSDYTDYGAFMQAIVYHPTAPVYNQEGKFFEYAGVGPYNPVALL CCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHH SQVDNRGERYTYSGNLSANLKVLPCLSVYAMMSANNDTYEGSKYISRDSRYSVLGGFEGQ HHHCCCCCEEEEECCCCCCEEEEEHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEECCCCC ADMNTYFYKKRTFEAYANYSFSTDVHNLTALAGYSFNREDRTWHNASNSGFLTDIPGANN CCCCEEEEEEEEEEHHCCCEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCC IGNGTYLEDGLASMGRGQDESKLIAFFGRINYSYKGKYLFNASVRREGSTRFGENHKWGW CCCCCEEHHHHHHHCCCCCCCEEEEEEEEECEEECCCEEEECEECCCCCCCCCCCCCCCC FPAVSAGWRILEENFFSDATPLSNLKLRVGFGITGNQDIPLYASIAKYNDLGYAYYNGKW CCCHHHCHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCEEEEECCEE DKVYGPVSNPNPDLKWEKNAEYNAGVDFGIWNDRLTASVDYYYRKTTDLLDWYDAQMPSN EEEECCCCCCCCCCEECCCCCCCCCCEEEEECCCEEEEEEEEEECCCHHHHHHHCCCCHH IYSTIFTNVGTLTNQGIEFAIGYDVIRNKELKWHLDGGFSYNENKLVSLANSSYRANHIT HHHHHHHHCCCCCCCCEEEEEEEHHHCCCCEEEEECCCCCCCCCEEEEEECCCEECCEEE YNPLSSPANGQTTYILEEGKPIGTYYGLKYRGFNSAGKWVFEDRDEDGAYSDKDYTYLGN ECCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCEEECC GLPKWYFNLASTLTWKDFDFSFQLRGAAGFKVLNTKRIYYENSVSLPFNLLKSALGRPLN CCHHHHHHHHHEEEEECCCEEEEECCCCCEEEEEEEEEEEECCCCCCHHHHHHHHCCCCC DAATFSDYYLEKGNYLKLDNITVGYTFDLSQLKYVSNARIYATATNLLTITGYTGVDPEV CHHHCHHHHCCCCCEEEECCEEEEEEECHHHHHHHCCCEEEEEEEEEEEEECCCCCCCCC GTGLTPGFDDSGYYPRSTTLMLGLNIKF CCCCCCCCCCCCCCCCCEEEEEEEEECC >Mature Secondary Structure MENLAISFFERIKEQVTLRTIKYCILMAGFLCVCVPSLYGVENLNVTGKVVDSSGEPLIG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEE VSIKVENKNMGTTTDINGNFTLADIPKNTVLVLTYIGMETQKVTVTQNRLNIVMRENSVQ EEEEEECCCCCCEEECCCCEEEEECCCCEEEEEEEECCCEEEEEEEECEEEEEEECCCCC LEEVVAIGYGTVKKEELTSAVTKVGEESFNAGVTTSPINLLNGKVPGLSIRNTSGNDPNA EEHEEEECCCCCCHHHHHHHHHHHCHHHCCCCCCCCCHHHHCCCCCCEEEECCCCCCCCC SPEIHLRGIGSIRAGSAPLIIVDGTYSTMSELQAINANDIKSFNVLKDGSSAAIYGTRGS CCEEEEEECCCEECCCCCEEEECCCHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCC NGVIIVETKNASKGKASIEYTSYYYTERPVRKLEMMSADEYMGYLKDKGHSTINNDYGFS CCEEEEEECCCCCCCEEEEEEEEEECCCCHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCC TDWTDQLIRNNFSYYQGVSFSTGTENSSIRGSVGYRDSESMVINTGNKQLTGRVNFKQYF CCHHHHHHHCCCCHHCCCEECCCCCCCCEEEECCCCCCCCEEEECCCCEEEEEECHHHHH FDKKLTIEGTLNGANTQSDYTDYGAFMQAIVYHPTAPVYNQEGKFFEYAGVGPYNPVALL CCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHH SQVDNRGERYTYSGNLSANLKVLPCLSVYAMMSANNDTYEGSKYISRDSRYSVLGGFEGQ HHHCCCCCEEEEECCCCCCEEEEEHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEECCCCC ADMNTYFYKKRTFEAYANYSFSTDVHNLTALAGYSFNREDRTWHNASNSGFLTDIPGANN CCCCEEEEEEEEEEHHCCCEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCC IGNGTYLEDGLASMGRGQDESKLIAFFGRINYSYKGKYLFNASVRREGSTRFGENHKWGW CCCCCEEHHHHHHHCCCCCCCEEEEEEEEECEEECCCEEEECEECCCCCCCCCCCCCCCC FPAVSAGWRILEENFFSDATPLSNLKLRVGFGITGNQDIPLYASIAKYNDLGYAYYNGKW CCCHHHCHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCEEEEECCEE DKVYGPVSNPNPDLKWEKNAEYNAGVDFGIWNDRLTASVDYYYRKTTDLLDWYDAQMPSN EEEECCCCCCCCCCEECCCCCCCCCCEEEEECCCEEEEEEEEEECCCHHHHHHHCCCCHH IYSTIFTNVGTLTNQGIEFAIGYDVIRNKELKWHLDGGFSYNENKLVSLANSSYRANHIT HHHHHHHHCCCCCCCCEEEEEEEHHHCCCCEEEEECCCCCCCCCEEEEEECCCEECCEEE YNPLSSPANGQTTYILEEGKPIGTYYGLKYRGFNSAGKWVFEDRDEDGAYSDKDYTYLGN ECCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCEEECC GLPKWYFNLASTLTWKDFDFSFQLRGAAGFKVLNTKRIYYENSVSLPFNLLKSALGRPLN CCHHHHHHHHHEEEEECCCEEEEECCCCCEEEEEEEEEEEECCCCCCHHHHHHHHCCCCC DAATFSDYYLEKGNYLKLDNITVGYTFDLSQLKYVSNARIYATATNLLTITGYTGVDPEV CHHHCHHHHCCCCCEEEECCEEEEEEECHHHHHHHCCCEEEEEEEEEEEEECCCCCCCCC GTGLTPGFDDSGYYPRSTTLMLGLNIKF CCCCCCCCCCCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA