| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348338
Identifier: 29348338
GI number: 29348338
Start: 3685121
End: 3685639
Strand: Reverse
Name: 29348338
Synonym: BT_2929
Alternate gene names: NA
Gene position: 3685639-3685121 (Counterclockwise)
Preceding gene: 29348339
Following gene: 29348337
Centisome position: 58.87
GC content: 52.22
Gene sequence:
>519_bases ATGCCAGTATTATATAAACCTTTCCAGTCTAATCTGGAAGATAAGAAAAGTGGGAAGAAACTGTTTTATCCCCATGTAGT TCGTACAGGAAATATCAATTCCGCACAGCTTTCCAAAGAGATTGCCGCATATTCTTCCCTTTCTCCGGGTGATGTAAAAA ATACGCTTGACAATCTGGTGACGGTGATGGCGCAGCATCTTCAGTCGTCCGAAAGCGTCAGTGTGGATGGCTTGGGAACG TTCCGCATGGTGATGAGTGCCCGTGGCCGGGGTGTTGAGACCGCCGATGAGGTGAGTGCTGCACAGGCTACGCTTACCGT CCGCTTCCAGCCTACCACGACGAAGAATCTGGATCGTACCACCGCTACTCGTTCTATGGTGACGGGTGCCAAGTGTGCTC GCTATGACAAGCTGGTCTCCGCACCTGGTGACGGCGGATCGGTTGATGATCCGAATGACAAGCCTGGTGGTGGCAGCGAT GGCGGAGATGATGGAGAAGCACCGGACCCGACAGTATAA
Upstream 100 bases:
>100_bases ATCGCTTGTATAGCTGAGAATAAGCCCTTATATTTGCAGTGTCAATAAGCTTAACGACAGAAACTAACAAAAAGATTAAT AACTAAAAACTATTACAATT
Downstream 100 bases:
>100_bases TTTGTTTCTTGCTTCGCGGGAAGAAATATAAGACTAACGACTGAACTGTAACTGTAAAACAGAAAAATAAAGAAACAAGA AACAAACTAGAGCTAACTAA
Product: putative non-specific DNA-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MPVLYKPFQSNLEDKKSGKKLFYPHVVRTGNINSAQLSKEIAAYSSLSPGDVKNTLDNLVTVMAQHLQSSESVSVDGLGT FRMVMSARGRGVETADEVSAAQATLTVRFQPTTTKNLDRTTATRSMVTGAKCARYDKLVSAPGDGGSVDDPNDKPGGGSD GGDDGEAPDPTV
Sequences:
>Translated_172_residues MPVLYKPFQSNLEDKKSGKKLFYPHVVRTGNINSAQLSKEIAAYSSLSPGDVKNTLDNLVTVMAQHLQSSESVSVDGLGT FRMVMSARGRGVETADEVSAAQATLTVRFQPTTTKNLDRTTATRSMVTGAKCARYDKLVSAPGDGGSVDDPNDKPGGGSD GGDDGEAPDPTV >Mature_171_residues PVLYKPFQSNLEDKKSGKKLFYPHVVRTGNINSAQLSKEIAAYSSLSPGDVKNTLDNLVTVMAQHLQSSESVSVDGLGTF RMVMSARGRGVETADEVSAAQATLTVRFQPTTTKNLDRTTATRSMVTGAKCARYDKLVSAPGDGGSVDDPNDKPGGGSDG GDDGEAPDPTV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18124; Mature: 17993
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVLYKPFQSNLEDKKSGKKLFYPHVVRTGNINSAQLSKEIAAYSSLSPGDVKNTLDNLV CCCCCCHHHCCCHHHHCCCEEECCEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH TVMAQHLQSSESVSVDGLGTFRMVMSARGRGVETADEVSAAQATLTVRFQPTTTKNLDRT HHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHCEEEEEEEECCCCCCCCCHH TATRSMVTGAKCARYDKLVSAPGDGGSVDDPNDKPGGGSDGGDDGEAPDPTV HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PVLYKPFQSNLEDKKSGKKLFYPHVVRTGNINSAQLSKEIAAYSSLSPGDVKNTLDNLV CCCCCHHHCCCHHHHCCCEEECCEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH TVMAQHLQSSESVSVDGLGTFRMVMSARGRGVETADEVSAAQATLTVRFQPTTTKNLDRT HHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHCEEEEEEEECCCCCCCCCHH TATRSMVTGAKCARYDKLVSAPGDGGSVDDPNDKPGGGSDGGDDGEAPDPTV HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA