Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348308

Identifier: 29348308

GI number: 29348308

Start: 3627234

End: 3629267

Strand: Reverse

Name: 29348308

Synonym: BT_2899

Alternate gene names: NA

Gene position: 3629267-3627234 (Counterclockwise)

Preceding gene: 29348309

Following gene: 29348307

Centisome position: 57.97

GC content: 42.53

Gene sequence:

>2034_bases
ATGAATTTAAAATGCTTACTTTGTGGAATAGCTATTTTGGTATGTGTCGGAACCGTAAAGGCTATTGACAATGTGTCGGA
ACGTGTATCCGCATCTATTTCTTTGAAAGTGCCGGGAAATGAGGCAAAACAGTACCCGTTGACTTTCCAGAAGACCAAAA
ACGACAAAAGCGCTTATCAGTTGGAAGCCTCTGAAAGAATTCCGTTGACAGTTTATCAAACAATAGAAGAAAAAGGCGGA
AAATCGCAGATAACAGTATGTATCACTGCATTGGAGGATGTATATTTTAATTACAGTCAACAAGTGTCAACAGGGTTCCG
CCATGATGACTGCCAGTTCTACATGCCCGGATTCTGGTATCGCCGTAATCTTCGTTCTCCAAAGTCGGCTCCCTCGTTTC
ATACTTCGGATAGTTGGTTGGTGCGTGAAGATAGGTTAAGTACCCCTCTTACAGGTATCTACAGTGAGGGAACCAAACGT
TTTATGACCGTAAACCGTATCGATCAGTTCGAGAATGACGCTTTGACTACTCATCGGGAGGGAGAGGTTATTCTTTCCGG
TAAAACCTCCCTTGGTTTCACCGGCTTTGAGAATCGTAATGGCATAGCTACACTTTCTTTCGGTTTCCCCTATCAGGAAG
CTCCTAAGAGCTATATTCGCAAGCTGACATTGGCCCCGCAGGTAAAGGCTTTTCAGTTGTTGAAAAAAGGTGAAACCGTT
TTATTGAACTGGACTATTTATGAAGATGCAGCCGAAGATTACTCGGATTTTATTCGTCATACTTGGGAATATTGTTACGA
TACTTATGCTCCAAAGCCAGTTGATACTCCCTATTCAATAGCGGACATGAAAAATACTCTTAGTTCTTTTTTCGTGAATA
GCTTGGTGAGTAAACCGGAGTTGACTTACTATTCAGGGGTAGGCTTGCGGACAGATGATTGTAAAAGTAACGGAGAGGCG
GAAGTCGGTTTTGTCGGACGTGTTCTTTTGAATGCATTCAATGCTTGGGAATATGGCTGGGAAAGCAATCGGGCAGAACT
GAAGGAAAACAGCCTTAAGATTTTTGACAGTTACTTGAAGAATGGCTTTACTGAGGCAGGGTTCTTTAAGGAATTTGTGA
ATCTGGATCGTAACTTTGAGGAACCGGTTCATAGTATTCGCCGTCAATCAGAAGGAATCTATGCAATGCTTCATTTCCTG
GCATACGAGAAAGAACAAGGACGTCGCCATCCGGAGTGGGAACAACGGATGAAGAAGATGCTTGACATGTTTATGCAATT
GCAGAATCAGGATGGTAGTTTTCCACGTAAGTTCCGGGATGATTTTTCTATAGTCGATAAGAGCGGTGGTAGTACTCCTT
CGGCTACTCTGCCATTAGTGATGGGATATAAGTATTTTAAAGATAAACGCTATCTGGATAGTGCCAAGAAGACAGCGGAT
TATCTGGAAAATGAACTGATTTCGAAAGCAGATTATTTCTCCTCTACACTTGATGCAAACTGTGAAGATAAGGAGGCATC
GCTTTATGCTGCAACTGCTACTTACTATTTGGCATTGATAACCAAAGGAGAAGAGCATAAGCATTATGCCGACCTGACGA
AAAAAGCTGCATATTTTGCGTTGTCATGGTATTATTTGTGGGATGTACCTTTTGCTCCCGGTCAAATGTTGGGTGATATA
GGACTGAAGACACGTGGATGGGGTAATGTGTCCGTAGAGAATAACCATATCGATGTGTTTATCTTTGAGTTTGCTTCCGT
GCTTCAGTGGTTGTCTAAAGAATATAAAGAACCTCGTTTTGCAGATTTTGCGGAAGTGATTTCTACGTCTATGCGGCAGT
TATTGCCTCACGATGGTCATATGTGCGGCATTGCCAAAGTCGGTTATTATCCGGAAGTTGTTCAACATACGAACTGGGAT
TATGGAAGGAACGGAAAAGGATATTATAACGATATCTTTGCACCGGGATGGACGGTAGCCTCTTTGTGGGAGCTATTGAC
TCCGGGACGTGCCGAAAAGATGTTGGTTAAGTAA

Upstream 100 bases:

>100_bases
AGATTTTATTTTGTAGAACAGACAGAATTAAGATAACAACAAAATTTAATACTAACAGAATCGGAGATTGATTGCTACTG
ATTCGCATAATTTGATTTAT

Downstream 100 bases:

>100_bases
TTCATCTAATCTGTGATATATATGCTAAAGAAACGATTCTATATTCTACTGTTCTTCTGCCTGCTTCTTGGAGGAAATGT
AAATAGCAGTACAGTGGATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 677; Mature: 677

Protein sequence:

>677_residues
MNLKCLLCGIAILVCVGTVKAIDNVSERVSASISLKVPGNEAKQYPLTFQKTKNDKSAYQLEASERIPLTVYQTIEEKGG
KSQITVCITALEDVYFNYSQQVSTGFRHDDCQFYMPGFWYRRNLRSPKSAPSFHTSDSWLVREDRLSTPLTGIYSEGTKR
FMTVNRIDQFENDALTTHREGEVILSGKTSLGFTGFENRNGIATLSFGFPYQEAPKSYIRKLTLAPQVKAFQLLKKGETV
LLNWTIYEDAAEDYSDFIRHTWEYCYDTYAPKPVDTPYSIADMKNTLSSFFVNSLVSKPELTYYSGVGLRTDDCKSNGEA
EVGFVGRVLLNAFNAWEYGWESNRAELKENSLKIFDSYLKNGFTEAGFFKEFVNLDRNFEEPVHSIRRQSEGIYAMLHFL
AYEKEQGRRHPEWEQRMKKMLDMFMQLQNQDGSFPRKFRDDFSIVDKSGGSTPSATLPLVMGYKYFKDKRYLDSAKKTAD
YLENELISKADYFSSTLDANCEDKEASLYAATATYYLALITKGEEHKHYADLTKKAAYFALSWYYLWDVPFAPGQMLGDI
GLKTRGWGNVSVENNHIDVFIFEFASVLQWLSKEYKEPRFADFAEVISTSMRQLLPHDGHMCGIAKVGYYPEVVQHTNWD
YGRNGKGYYNDIFAPGWTVASLWELLTPGRAEKMLVK

Sequences:

>Translated_677_residues
MNLKCLLCGIAILVCVGTVKAIDNVSERVSASISLKVPGNEAKQYPLTFQKTKNDKSAYQLEASERIPLTVYQTIEEKGG
KSQITVCITALEDVYFNYSQQVSTGFRHDDCQFYMPGFWYRRNLRSPKSAPSFHTSDSWLVREDRLSTPLTGIYSEGTKR
FMTVNRIDQFENDALTTHREGEVILSGKTSLGFTGFENRNGIATLSFGFPYQEAPKSYIRKLTLAPQVKAFQLLKKGETV
LLNWTIYEDAAEDYSDFIRHTWEYCYDTYAPKPVDTPYSIADMKNTLSSFFVNSLVSKPELTYYSGVGLRTDDCKSNGEA
EVGFVGRVLLNAFNAWEYGWESNRAELKENSLKIFDSYLKNGFTEAGFFKEFVNLDRNFEEPVHSIRRQSEGIYAMLHFL
AYEKEQGRRHPEWEQRMKKMLDMFMQLQNQDGSFPRKFRDDFSIVDKSGGSTPSATLPLVMGYKYFKDKRYLDSAKKTAD
YLENELISKADYFSSTLDANCEDKEASLYAATATYYLALITKGEEHKHYADLTKKAAYFALSWYYLWDVPFAPGQMLGDI
GLKTRGWGNVSVENNHIDVFIFEFASVLQWLSKEYKEPRFADFAEVISTSMRQLLPHDGHMCGIAKVGYYPEVVQHTNWD
YGRNGKGYYNDIFAPGWTVASLWELLTPGRAEKMLVK
>Mature_677_residues
MNLKCLLCGIAILVCVGTVKAIDNVSERVSASISLKVPGNEAKQYPLTFQKTKNDKSAYQLEASERIPLTVYQTIEEKGG
KSQITVCITALEDVYFNYSQQVSTGFRHDDCQFYMPGFWYRRNLRSPKSAPSFHTSDSWLVREDRLSTPLTGIYSEGTKR
FMTVNRIDQFENDALTTHREGEVILSGKTSLGFTGFENRNGIATLSFGFPYQEAPKSYIRKLTLAPQVKAFQLLKKGETV
LLNWTIYEDAAEDYSDFIRHTWEYCYDTYAPKPVDTPYSIADMKNTLSSFFVNSLVSKPELTYYSGVGLRTDDCKSNGEA
EVGFVGRVLLNAFNAWEYGWESNRAELKENSLKIFDSYLKNGFTEAGFFKEFVNLDRNFEEPVHSIRRQSEGIYAMLHFL
AYEKEQGRRHPEWEQRMKKMLDMFMQLQNQDGSFPRKFRDDFSIVDKSGGSTPSATLPLVMGYKYFKDKRYLDSAKKTAD
YLENELISKADYFSSTLDANCEDKEASLYAATATYYLALITKGEEHKHYADLTKKAAYFALSWYYLWDVPFAPGQMLGDI
GLKTRGWGNVSVENNHIDVFIFEFASVLQWLSKEYKEPRFADFAEVISTSMRQLLPHDGHMCGIAKVGYYPEVVQHTNWD
YGRNGKGYYNDIFAPGWTVASLWELLTPGRAEKMLVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77564; Mature: 77564

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKCLLCGIAILVCVGTVKAIDNVSERVSASISLKVPGNEAKQYPLTFQKTKNDKSAYQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEECCCCCCEEE
LEASERIPLTVYQTIEEKGGKSQITVCITALEDVYFNYSQQVSTGFRHDDCQFYMPGFWY
EECCCCCCCHHHHHHHHCCCCCEEEEHHHHHHHHHHCCHHHHHCCCCCCCCEEECCCHHH
RRNLRSPKSAPSFHTSDSWLVREDRLSTPLTGIYSEGTKRFMTVNRIDQFENDALTTHRE
HHCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHCCCHHHEEHHHHHHHCCCCCCCCCC
GEVILSGKTSLGFTGFENRNGIATLSFGFPYQEAPKSYIRKLTLAPQVKAFQLLKKGETV
CCEEEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCEE
LLNWTIYEDAAEDYSDFIRHTWEYCYDTYAPKPVDTPYSIADMKNTLSSFFVNSLVSKPE
EEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
LTYYSGVGLRTDDCKSNGEAEVGFVGRVLLNAFNAWEYGWESNRAELKENSLKIFDSYLK
CEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
NGFTEAGFFKEFVNLDRNFEEPVHSIRRQSEGIYAMLHFLAYEKEQGRRHPEWEQRMKKM
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
LDMFMQLQNQDGSFPRKFRDDFSIVDKSGGSTPSATLPLVMGYKYFKDKRYLDSAKKTAD
HHHHHHHHCCCCCCCHHHCCCHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
YLENELISKADYFSSTLDANCEDKEASLYAATATYYLALITKGEEHKHYADLTKKAAYFA
HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHEEEEEEECCCCHHHHHHHHHHHHHHE
LSWYYLWDVPFAPGQMLGDIGLKTRGWGNVSVENNHIDVFIFEFASVLQWLSKEYKEPRF
EEEEEEEECCCCCHHHHHHCCCCCCCCCCEEEECCCEEEEHHHHHHHHHHHHHHHCCCCH
ADFAEVISTSMRQLLPHDGHMCGIAKVGYYPEVVQHTNWDYGRNGKGYYNDIFAPGWTVA
HHHHHHHHHHHHHHCCCCCCEEEEHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH
SLWELLTPGRAEKMLVK
HHHHHHCCCCCHHCCCC
>Mature Secondary Structure
MNLKCLLCGIAILVCVGTVKAIDNVSERVSASISLKVPGNEAKQYPLTFQKTKNDKSAYQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEECCCCCCEEE
LEASERIPLTVYQTIEEKGGKSQITVCITALEDVYFNYSQQVSTGFRHDDCQFYMPGFWY
EECCCCCCCHHHHHHHHCCCCCEEEEHHHHHHHHHHCCHHHHHCCCCCCCCEEECCCHHH
RRNLRSPKSAPSFHTSDSWLVREDRLSTPLTGIYSEGTKRFMTVNRIDQFENDALTTHRE
HHCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHCCCHHHEEHHHHHHHCCCCCCCCCC
GEVILSGKTSLGFTGFENRNGIATLSFGFPYQEAPKSYIRKLTLAPQVKAFQLLKKGETV
CCEEEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCEE
LLNWTIYEDAAEDYSDFIRHTWEYCYDTYAPKPVDTPYSIADMKNTLSSFFVNSLVSKPE
EEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
LTYYSGVGLRTDDCKSNGEAEVGFVGRVLLNAFNAWEYGWESNRAELKENSLKIFDSYLK
CEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
NGFTEAGFFKEFVNLDRNFEEPVHSIRRQSEGIYAMLHFLAYEKEQGRRHPEWEQRMKKM
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
LDMFMQLQNQDGSFPRKFRDDFSIVDKSGGSTPSATLPLVMGYKYFKDKRYLDSAKKTAD
HHHHHHHHCCCCCCCHHHCCCHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
YLENELISKADYFSSTLDANCEDKEASLYAATATYYLALITKGEEHKHYADLTKKAAYFA
HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHEEEEEEECCCCHHHHHHHHHHHHHHE
LSWYYLWDVPFAPGQMLGDIGLKTRGWGNVSVENNHIDVFIFEFASVLQWLSKEYKEPRF
EEEEEEEECCCCCHHHHHHCCCCCCCCCCEEEECCCEEEEHHHHHHHHHHHHHHHCCCCH
ADFAEVISTSMRQLLPHDGHMCGIAKVGYYPEVVQHTNWDYGRNGKGYYNDIFAPGWTVA
HHHHHHHHHHHHHHCCCCCCEEEEHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH
SLWELLTPGRAEKMLVK
HHHHHHCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA