| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348281
Identifier: 29348281
GI number: 29348281
Start: 3592634
End: 3593563
Strand: Reverse
Name: 29348281
Synonym: BT_2872
Alternate gene names: NA
Gene position: 3593563-3592634 (Counterclockwise)
Preceding gene: 29348282
Following gene: 29348280
Centisome position: 57.4
GC content: 36.88
Gene sequence:
>930_bases ATGAAGTTAAAAGAACTAGTAAAGCAGTTTATTCCTATGAATTACTGGAATACCAGGCGTAAAGCATCTATCATTAGACA GCAAGGGAAAGTAGCCGACTTTTGGGCTCCTATTCTTAAAGCTTATTATAATGGTGAGATAGAAAGATACTCACTGAAGC CTAAAAAAAAGTTGGGTACTCAAAAAGTGATTTGGCAATACTGGGGACAGGGCATTGATAAAGATGAGTTACCCGAAATC ATACAAATATGTTTTGATTCGGTTGACAGGAACAAAAATGATTATCAAGTGATTCGCCTGACGGATATAACTATATCTGA GTATATAGACTTGCCGGATTTTGTTTGGAGAAAGCGTGAGTATGTACAGTTTACCCGTACATTCTTTTCTGATTTGCTTC GTGTAGCCTTATTGAGCACTTATGGTGGTGTATGGTTGGATGCTACTATTTTACTCACTGGAAGTATTCCGGCTGTCTAT GAGAAGACTGATTTTTTTATGTATCAGCGCTCTGATGAAGAGAAGAACAAGAAGTACTGGGAAAATGTTTATGCTTATTA TTTTGGCTGGGAACCTAATTTTAAGGTGCGAATGTTGTCTAGTATCCTTTTTGCTCAAAAAGAGAGCGAGATTATTTCAA CTCTAACCGATCTTCTGCTTTATTTTTGGAAAACTCAAGACTCGCTGCCTGATTATTTTTGTTTTCAGATTCTATTTAAT GAATTAGTAGCCAACTACCGGCCTGCTGAAAATTGTCCGATAGTAAACGATTGCATTCCGCACATCATACAAACAAAAAT AAATGGAACTTATGATGATGTGTCATTTGAAGAAGCCTTGGAGCTAAGCAATATTCACAAAATGACTTATTTTGATGCTG CTGCAATGATACGTCTCAAGATGGTGTTACGATTAGCCCGAAATGCTTGA
Upstream 100 bases:
>100_bases TTTATTTCTTATCTAAGCTTTATAGAACATCTTGCGGGACCTTTGTGGTAGATAAACTCCAGGCATTATATCGCAAAATG AAATATTAATGATGGAGAAA
Downstream 100 bases:
>100_bases CTACAGTATGAAACATGCATATTTGATAATGGCTCACCACGAGTTTGAGGTTTTAGGGAAGTTGGTTCAGGCCCTTGATG ATGAACGAAATGATATCTAT
Product: putative capsular polysaccharide synthesis protein
Products: NA
Alternate protein names: Capsular Polysaccharide Synthesis; Polysaccharide Biosynthesis Protein; Teichoic Acid/Polysaccharide Biosynthesis Protein; Glycosyltransferase; Glycosyl Transferase; Alpha(1 2)Galactosyltransferase EpsI
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MKLKELVKQFIPMNYWNTRRKASIIRQQGKVADFWAPILKAYYNGEIERYSLKPKKKLGTQKVIWQYWGQGIDKDELPEI IQICFDSVDRNKNDYQVIRLTDITISEYIDLPDFVWRKREYVQFTRTFFSDLLRVALLSTYGGVWLDATILLTGSIPAVY EKTDFFMYQRSDEEKNKKYWENVYAYYFGWEPNFKVRMLSSILFAQKESEIISTLTDLLLYFWKTQDSLPDYFCFQILFN ELVANYRPAENCPIVNDCIPHIIQTKINGTYDDVSFEEALELSNIHKMTYFDAAAMIRLKMVLRLARNA
Sequences:
>Translated_309_residues MKLKELVKQFIPMNYWNTRRKASIIRQQGKVADFWAPILKAYYNGEIERYSLKPKKKLGTQKVIWQYWGQGIDKDELPEI IQICFDSVDRNKNDYQVIRLTDITISEYIDLPDFVWRKREYVQFTRTFFSDLLRVALLSTYGGVWLDATILLTGSIPAVY EKTDFFMYQRSDEEKNKKYWENVYAYYFGWEPNFKVRMLSSILFAQKESEIISTLTDLLLYFWKTQDSLPDYFCFQILFN ELVANYRPAENCPIVNDCIPHIIQTKINGTYDDVSFEEALELSNIHKMTYFDAAAMIRLKMVLRLARNA >Mature_309_residues MKLKELVKQFIPMNYWNTRRKASIIRQQGKVADFWAPILKAYYNGEIERYSLKPKKKLGTQKVIWQYWGQGIDKDELPEI IQICFDSVDRNKNDYQVIRLTDITISEYIDLPDFVWRKREYVQFTRTFFSDLLRVALLSTYGGVWLDATILLTGSIPAVY EKTDFFMYQRSDEEKNKKYWENVYAYYFGWEPNFKVRMLSSILFAQKESEIISTLTDLLLYFWKTQDSLPDYFCFQILFN ELVANYRPAENCPIVNDCIPHIIQTKINGTYDDVSFEEALELSNIHKMTYFDAAAMIRLKMVLRLARNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36742; Mature: 36742
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLKELVKQFIPMNYWNTRRKASIIRQQGKVADFWAPILKAYYNGEIERYSLKPKKKLGT CCHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHCH QKVIWQYWGQGIDKDELPEIIQICFDSVDRNKNDYQVIRLTDITISEYIDLPDFVWRKRE HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHHCCCHHHHHHHHH YVQFTRTFFSDLLRVALLSTYGGVWLDATILLTGSIPAVYEKTDFFMYQRSDEEKNKKYW HHHHHHHHHHHHHHHHHHHHCCCHHEEEEEEEECCCCHHHHHHHHEEEECCCCHHHHHHH ENVYAYYFGWEPNFKVRMLSSILFAQKESEIISTLTDLLLYFWKTQDSLPDYFCFQILFN HHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH ELVANYRPAENCPIVNDCIPHIIQTKINGTYDDVSFEEALELSNIHKMTYFDAAAMIRLK HHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH MVLRLARNA HHHHHHHCC >Mature Secondary Structure MKLKELVKQFIPMNYWNTRRKASIIRQQGKVADFWAPILKAYYNGEIERYSLKPKKKLGT CCHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHCH QKVIWQYWGQGIDKDELPEIIQICFDSVDRNKNDYQVIRLTDITISEYIDLPDFVWRKRE HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHHCCCHHHHHHHHH YVQFTRTFFSDLLRVALLSTYGGVWLDATILLTGSIPAVYEKTDFFMYQRSDEEKNKKYW HHHHHHHHHHHHHHHHHHHHCCCHHEEEEEEEECCCCHHHHHHHHEEEECCCCHHHHHHH ENVYAYYFGWEPNFKVRMLSSILFAQKESEIISTLTDLLLYFWKTQDSLPDYFCFQILFN HHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH ELVANYRPAENCPIVNDCIPHIIQTKINGTYDDVSFEEALELSNIHKMTYFDAAAMIRLK HHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH MVLRLARNA HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA