Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348281

Identifier: 29348281

GI number: 29348281

Start: 3592634

End: 3593563

Strand: Reverse

Name: 29348281

Synonym: BT_2872

Alternate gene names: NA

Gene position: 3593563-3592634 (Counterclockwise)

Preceding gene: 29348282

Following gene: 29348280

Centisome position: 57.4

GC content: 36.88

Gene sequence:

>930_bases
ATGAAGTTAAAAGAACTAGTAAAGCAGTTTATTCCTATGAATTACTGGAATACCAGGCGTAAAGCATCTATCATTAGACA
GCAAGGGAAAGTAGCCGACTTTTGGGCTCCTATTCTTAAAGCTTATTATAATGGTGAGATAGAAAGATACTCACTGAAGC
CTAAAAAAAAGTTGGGTACTCAAAAAGTGATTTGGCAATACTGGGGACAGGGCATTGATAAAGATGAGTTACCCGAAATC
ATACAAATATGTTTTGATTCGGTTGACAGGAACAAAAATGATTATCAAGTGATTCGCCTGACGGATATAACTATATCTGA
GTATATAGACTTGCCGGATTTTGTTTGGAGAAAGCGTGAGTATGTACAGTTTACCCGTACATTCTTTTCTGATTTGCTTC
GTGTAGCCTTATTGAGCACTTATGGTGGTGTATGGTTGGATGCTACTATTTTACTCACTGGAAGTATTCCGGCTGTCTAT
GAGAAGACTGATTTTTTTATGTATCAGCGCTCTGATGAAGAGAAGAACAAGAAGTACTGGGAAAATGTTTATGCTTATTA
TTTTGGCTGGGAACCTAATTTTAAGGTGCGAATGTTGTCTAGTATCCTTTTTGCTCAAAAAGAGAGCGAGATTATTTCAA
CTCTAACCGATCTTCTGCTTTATTTTTGGAAAACTCAAGACTCGCTGCCTGATTATTTTTGTTTTCAGATTCTATTTAAT
GAATTAGTAGCCAACTACCGGCCTGCTGAAAATTGTCCGATAGTAAACGATTGCATTCCGCACATCATACAAACAAAAAT
AAATGGAACTTATGATGATGTGTCATTTGAAGAAGCCTTGGAGCTAAGCAATATTCACAAAATGACTTATTTTGATGCTG
CTGCAATGATACGTCTCAAGATGGTGTTACGATTAGCCCGAAATGCTTGA

Upstream 100 bases:

>100_bases
TTTATTTCTTATCTAAGCTTTATAGAACATCTTGCGGGACCTTTGTGGTAGATAAACTCCAGGCATTATATCGCAAAATG
AAATATTAATGATGGAGAAA

Downstream 100 bases:

>100_bases
CTACAGTATGAAACATGCATATTTGATAATGGCTCACCACGAGTTTGAGGTTTTAGGGAAGTTGGTTCAGGCCCTTGATG
ATGAACGAAATGATATCTAT

Product: putative capsular polysaccharide synthesis protein

Products: NA

Alternate protein names: Capsular Polysaccharide Synthesis; Polysaccharide Biosynthesis Protein; Teichoic Acid/Polysaccharide Biosynthesis Protein; Glycosyltransferase; Glycosyl Transferase; Alpha(1 2)Galactosyltransferase EpsI

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MKLKELVKQFIPMNYWNTRRKASIIRQQGKVADFWAPILKAYYNGEIERYSLKPKKKLGTQKVIWQYWGQGIDKDELPEI
IQICFDSVDRNKNDYQVIRLTDITISEYIDLPDFVWRKREYVQFTRTFFSDLLRVALLSTYGGVWLDATILLTGSIPAVY
EKTDFFMYQRSDEEKNKKYWENVYAYYFGWEPNFKVRMLSSILFAQKESEIISTLTDLLLYFWKTQDSLPDYFCFQILFN
ELVANYRPAENCPIVNDCIPHIIQTKINGTYDDVSFEEALELSNIHKMTYFDAAAMIRLKMVLRLARNA

Sequences:

>Translated_309_residues
MKLKELVKQFIPMNYWNTRRKASIIRQQGKVADFWAPILKAYYNGEIERYSLKPKKKLGTQKVIWQYWGQGIDKDELPEI
IQICFDSVDRNKNDYQVIRLTDITISEYIDLPDFVWRKREYVQFTRTFFSDLLRVALLSTYGGVWLDATILLTGSIPAVY
EKTDFFMYQRSDEEKNKKYWENVYAYYFGWEPNFKVRMLSSILFAQKESEIISTLTDLLLYFWKTQDSLPDYFCFQILFN
ELVANYRPAENCPIVNDCIPHIIQTKINGTYDDVSFEEALELSNIHKMTYFDAAAMIRLKMVLRLARNA
>Mature_309_residues
MKLKELVKQFIPMNYWNTRRKASIIRQQGKVADFWAPILKAYYNGEIERYSLKPKKKLGTQKVIWQYWGQGIDKDELPEI
IQICFDSVDRNKNDYQVIRLTDITISEYIDLPDFVWRKREYVQFTRTFFSDLLRVALLSTYGGVWLDATILLTGSIPAVY
EKTDFFMYQRSDEEKNKKYWENVYAYYFGWEPNFKVRMLSSILFAQKESEIISTLTDLLLYFWKTQDSLPDYFCFQILFN
ELVANYRPAENCPIVNDCIPHIIQTKINGTYDDVSFEEALELSNIHKMTYFDAAAMIRLKMVLRLARNA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36742; Mature: 36742

Theoretical pI: Translated: 7.88; Mature: 7.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKELVKQFIPMNYWNTRRKASIIRQQGKVADFWAPILKAYYNGEIERYSLKPKKKLGT
CCHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHCH
QKVIWQYWGQGIDKDELPEIIQICFDSVDRNKNDYQVIRLTDITISEYIDLPDFVWRKRE
HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHHCCCHHHHHHHHH
YVQFTRTFFSDLLRVALLSTYGGVWLDATILLTGSIPAVYEKTDFFMYQRSDEEKNKKYW
HHHHHHHHHHHHHHHHHHHHCCCHHEEEEEEEECCCCHHHHHHHHEEEECCCCHHHHHHH
ENVYAYYFGWEPNFKVRMLSSILFAQKESEIISTLTDLLLYFWKTQDSLPDYFCFQILFN
HHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
ELVANYRPAENCPIVNDCIPHIIQTKINGTYDDVSFEEALELSNIHKMTYFDAAAMIRLK
HHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
MVLRLARNA
HHHHHHHCC
>Mature Secondary Structure
MKLKELVKQFIPMNYWNTRRKASIIRQQGKVADFWAPILKAYYNGEIERYSLKPKKKLGT
CCHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHCH
QKVIWQYWGQGIDKDELPEIIQICFDSVDRNKNDYQVIRLTDITISEYIDLPDFVWRKRE
HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHHCCCHHHHHHHHH
YVQFTRTFFSDLLRVALLSTYGGVWLDATILLTGSIPAVYEKTDFFMYQRSDEEKNKKYW
HHHHHHHHHHHHHHHHHHHHCCCHHEEEEEEEECCCCHHHHHHHHEEEECCCCHHHHHHH
ENVYAYYFGWEPNFKVRMLSSILFAQKESEIISTLTDLLLYFWKTQDSLPDYFCFQILFN
HHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
ELVANYRPAENCPIVNDCIPHIIQTKINGTYDDVSFEEALELSNIHKMTYFDAAAMIRLK
HHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
MVLRLARNA
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA