Click here to switch to the map view.

The map label for this gene is wcaL [C]

Identifier: 29348273

GI number: 29348273

Start: 3584072

End: 3585223

Strand: Reverse

Name: wcaL [C]

Synonym: BT_2864

Alternate gene names: 29348273

Gene position: 3585223-3584072 (Counterclockwise)

Preceding gene: 29348274

Following gene: 29348272

Centisome position: 57.27

GC content: 40.89

Gene sequence:

>1152_bases
ATGAGAATACTACAAATAGGCAAATTCTATCCGATAAGGGGAGGGATAGAGAAAGTGATGTATGACATCACAATGGGACT
GTCACAGAGACAGGTTTATTGTGATATGCTATGCGCCTCGGCCGAAAAACAGAAACCTGAGAATCTATTATTGAATGATT
ATGCACGTATACTATGTGTGTCCACCTGGAAAAAAGTGGCGGCTACTATGTTATCTCCGGCTATGATTTTCCGGTTGCGT
AAAATAAACAAAGAATATGATATCATTCATATCCATCATCCGGATCCAATGGCATGTCTGGCATTATTCCTGTCTGGTTA
CAAAGGTCCGGTAGTCCTGCACTGGCATAGTGATATACTGAAACAGAAAATGTTGTTGAAGCTCTATTCACCATTACAAA
ATTGGTTGCTTCGAAGAGCAAAAGTAATTGTTGGCACCACCCCCGTTTATGTACAGGAATCTCCGTTTTTGGAAAACATA
CAGCGCAAAGTTATCAGTGTTCCTATCGGAATAGATGAAATGAAGCCGGTTCCCGGGCGGGTGGCACAAATAAAAGAAAG
ATATGCCGGAAAGAAAATCATATTCTCTTTGGGACGTCTGGTAGAGTACAAAGGCTATGAATATCTGATAAAGGCTTCTC
AAAAGTTGAATGACGACTATATTATATTGATAGGTGGCAAAGGTCCCCTTCAAGAGTATTTGCAATCCTTGATTGATGAA
CTGGGAGTGAGGAAAAAAGTAAAACTGCTGGGATTTATAGATGACAAAGATCTGCCGGATTATTTCGGTGCCTGTGATCT
GTTTTGTTTAAGTTCGATTTGGAAAACGGAGGCTTTTGGTATTGTACAGATTGAAGCAATGTCCTGTGGAAAGCCTGTGA
TTGCTATGAATATCCCGGAGTCCGGAGTCAGTTGGGTGAATATAAACAGGTTCTCCGGAATTAACGTAAAACCTGAAGAT
GCAGATGCATTGGCAGAGGCGATTACTGCTGTTCTGACAGATGAATGCCTGTATGAAGAGTTAGCAAGAGGAGCGCGAAG
ACGTTATGAGACTATGTTTACTAAAGAGCTAATGACAGAACTATGTCTGAATCTTTATTCGGGAGTATTGGACAGTTCTG
AAACCGATTATCCGGCCAACAAAAAAGAATGA

Upstream 100 bases:

>100_bases
TTCGATTCTATATTAAATTAATTTTTTCAGTCCGGTACTATATATGCGGTAAGTGACAAACTAAACTTATGAAGAGTAAG
AAATAGATATTTTATTAAAA

Downstream 100 bases:

>100_bases
ATTCCGAAAAGTTGTAATCAAAGAAAAACAAGCTATATGAAAAGAAATGTGTATGTGGGAGTACTTTTGACAGCGTTATT
GATGACTTCTTGCATCAATA

Product: putative lipopolysaccharide biosynthesis glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MRILQIGKFYPIRGGIEKVMYDITMGLSQRQVYCDMLCASAEKQKPENLLLNDYARILCVSTWKKVAATMLSPAMIFRLR
KINKEYDIIHIHHPDPMACLALFLSGYKGPVVLHWHSDILKQKMLLKLYSPLQNWLLRRAKVIVGTTPVYVQESPFLENI
QRKVISVPIGIDEMKPVPGRVAQIKERYAGKKIIFSLGRLVEYKGYEYLIKASQKLNDDYIILIGGKGPLQEYLQSLIDE
LGVRKKVKLLGFIDDKDLPDYFGACDLFCLSSIWKTEAFGIVQIEAMSCGKPVIAMNIPESGVSWVNINRFSGINVKPED
ADALAEAITAVLTDECLYEELARGARRRYETMFTKELMTELCLNLYSGVLDSSETDYPANKKE

Sequences:

>Translated_383_residues
MRILQIGKFYPIRGGIEKVMYDITMGLSQRQVYCDMLCASAEKQKPENLLLNDYARILCVSTWKKVAATMLSPAMIFRLR
KINKEYDIIHIHHPDPMACLALFLSGYKGPVVLHWHSDILKQKMLLKLYSPLQNWLLRRAKVIVGTTPVYVQESPFLENI
QRKVISVPIGIDEMKPVPGRVAQIKERYAGKKIIFSLGRLVEYKGYEYLIKASQKLNDDYIILIGGKGPLQEYLQSLIDE
LGVRKKVKLLGFIDDKDLPDYFGACDLFCLSSIWKTEAFGIVQIEAMSCGKPVIAMNIPESGVSWVNINRFSGINVKPED
ADALAEAITAVLTDECLYEELARGARRRYETMFTKELMTELCLNLYSGVLDSSETDYPANKKE
>Mature_383_residues
MRILQIGKFYPIRGGIEKVMYDITMGLSQRQVYCDMLCASAEKQKPENLLLNDYARILCVSTWKKVAATMLSPAMIFRLR
KINKEYDIIHIHHPDPMACLALFLSGYKGPVVLHWHSDILKQKMLLKLYSPLQNWLLRRAKVIVGTTPVYVQESPFLENI
QRKVISVPIGIDEMKPVPGRVAQIKERYAGKKIIFSLGRLVEYKGYEYLIKASQKLNDDYIILIGGKGPLQEYLQSLIDE
LGVRKKVKLLGFIDDKDLPDYFGACDLFCLSSIWKTEAFGIVQIEAMSCGKPVIAMNIPESGVSWVNINRFSGINVKPED
ADALAEAITAVLTDECLYEELARGARRRYETMFTKELMTELCLNLYSGVLDSSETDYPANKKE

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR013534 [H]

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 43537; Mature: 43537

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILQIGKFYPIRGGIEKVMYDITMGLSQRQVYCDMLCASAEKQKPENLLLNDYARILCV
CCEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
STWKKVAATMLSPAMIFRLRKINKEYDIIHIHHPDPMACLALFLSGYKGPVVLHWHSDIL
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCCCEEEEECHHHH
KQKMLLKLYSPLQNWLLRRAKVIVGTTPVYVQESPFLENIQRKVISVPIGIDEMKPVPGR
HHHHHHHHHHHHHHHHHHHHHHEEECCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCH
VAQIKERYAGKKIIFSLGRLVEYKGYEYLIKASQKLNDDYIILIGGKGPLQEYLQSLIDE
HHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHH
LGVRKKVKLLGFIDDKDLPDYFGACDLFCLSSIWKTEAFGIVQIEAMSCGKPVIAMNIPE
HCCHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCC
SGVSWVNINRFSGINVKPEDADALAEAITAVLTDECLYEELARGARRRYETMFTKELMTE
CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LCLNLYSGVLDSSETDYPANKKE
HHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MRILQIGKFYPIRGGIEKVMYDITMGLSQRQVYCDMLCASAEKQKPENLLLNDYARILCV
CCEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
STWKKVAATMLSPAMIFRLRKINKEYDIIHIHHPDPMACLALFLSGYKGPVVLHWHSDIL
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCCCEEEEECHHHH
KQKMLLKLYSPLQNWLLRRAKVIVGTTPVYVQESPFLENIQRKVISVPIGIDEMKPVPGR
HHHHHHHHHHHHHHHHHHHHHHEEECCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCH
VAQIKERYAGKKIIFSLGRLVEYKGYEYLIKASQKLNDDYIILIGGKGPLQEYLQSLIDE
HHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHH
LGVRKKVKLLGFIDDKDLPDYFGACDLFCLSSIWKTEAFGIVQIEAMSCGKPVIAMNIPE
HCCHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCC
SGVSWVNINRFSGINVKPEDADALAEAITAVLTDECLYEELARGARRRYETMFTKELMTE
CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LCLNLYSGVLDSSETDYPANKKE
HHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]