| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is bglX [H]
Identifier: 29348263
GI number: 29348263
Start: 3561325
End: 3563604
Strand: Reverse
Name: bglX [H]
Synonym: BT_2854
Alternate gene names: 29348263
Gene position: 3563604-3561325 (Counterclockwise)
Preceding gene: 29348264
Following gene: 29348262
Centisome position: 56.92
GC content: 48.77
Gene sequence:
>2280_bases ATGACACTGAGAAATATAACTTGTGCTGTAACTTTATGCCTGCTTACCCTTTCGGGACAGGCTGTCGGAAAGACGGAGGT ACCACCTTATAAGAATAAATCACTTTCCATCGAGAAGCGTGTAGACGACCTGATGGGACGGATGACACTGCGTGAAAAGG TTCTGCAATTGCAGAACCGGGGCGCAGGCCGTCTGGACGAGATAGACCGTATATTCAACGGTGAGAGTTATGGCTGTACC CACGAAATGGGTACGACTGCCGCCGAATGTGCTGCGATGTACAAGGAACTGCAACAATACATGCTGACAAAAACAAGGCT CGGAATCCCCATTATTACTTCTGCCGAAGGCATTCAGGGAATCCTGCAAAATAATTGTACGCTGTTTCCGCACGCTTTGG CGCAGGGGAGTACCTTCAATCCTGCTCTGATCCAGCGCATGACCGAAGCTGCGGGAGAGGAAGCCAAAGTAATTGGTATC CATCAGATTCTCTCGCCCGTACTGGACATTGCCCGTGAACTTCGCTGGGGACGTGTAGAAGAGACCTTTGGTGAAGACCC TTACCTTATTTCCGAAATGGGTATCGCCTTTATCAATGGATATCAGAAAAACCGCATCACCTGTATGCCGAAGCATTTTG TTGCACACGGCACTCCCTCCGGCGGATTGAACTGTGCGCAGGTCAGCGGTGGTGAACGGGAACTGAGAAGTTTGTATCTC TATCCGTTCCGTCGTGTCATCAAGGAAACGAATCCGTTGGCATTGATGACTTGTTATAGTGCTTATGATGGAGTAGCCAT CACAGGGTCTCCTTATTACATGACAGATATTCTTCGTGGTGAACTCGGTTTCAAAGGGTATGTTTATTCTGACTGGGGAT CGGTGGACCGCCTTAAAACCTTTCATGCTATCACGCCCGAAACCGATGAGGCCGGACGCCTGGCATTGGAAGCCGGGGTA GACTTGAACATCGACTCTGCTTATGATAACTTCGAACGGATGGTACAGGACGGTCGTCTGGATATAAAATACATTGACCT TGCCGTTCGCCGTATCCTGACGGTTAAGTTTCAGTTAGGGCTGTTTGATGCGCCTTATGGCGATCCAAAAGCAGTGAGTA AAGTTGTTCGCAGTGCGGAGAAAGTAGCTTTGGCTAAGGAAATAGCTGACGAGAGCGCTATTCTGCTTGAGAATAAGAAT CAGATTCTTCCTTTGGATTTGGCTAAGTATAAGTCAATAGCCGTAGTAGGTCCGAACAGCAATCAGACGATATACGGAGA TTATGCCTGGACTACCAGAGATACCAAAGAAGGTGTCACTTTGCTTCAGGGATTAAAGGAGGTATTAGGAAATAAAGTAA CGGTTCGCCATGCCGAAGGATGTGACTGGTGGAGTAGTAAAAAGGATAAGATAGCGGAAGCGGTGGAAGCCGTTCGCGGC AGTGATCTGGCAATCGTTGCCGTCGGAACACGCAGTACCTATCTGGGCAGAAGTCCGAAATATTCCACTACCGGAGAAGG ATTCGACCTCTCTTCGCTGGAACTTCCCGGAGTACAGGAAGAACTGTTGCAGGAAATCAAGAAAACCGGAAAACCGATGG TTGTCGTATTGATAGCCGGCAAACCATTGGCTATGCCTTGGGTAAAAGAGAATGCCGACGCACTGTTGGTACAATGGTAT GGCGGCGAACAGCAGGGACGTTCGTTGGCGGATATCCTCGTAGGGAAGGTCAATCCGTCGGGACGACTGAATGTATCTTT CCCGCGTAGCACAGGCAATACTCCTTGCTTCTACAATCATTTTATCACAGACCGTAATGAACCGTTCGACCAGCCGGGCA GTCCCGAAGAACCGAAAGGACATTATATCTTTGACGCCCCCGACCCGTTATGGAGCTTTGGCAGCGGACAGAGTTACACT ACTTTTGAATATGTGGATTGTGCGTTGAGTGATTCTGTATTGACCGACAAGGATCAACTGACGGTAACGGTAAAAGTGAA GAACACCGGCAAGATGGATGGCAAAGAGGTAGTGCAACTGTATGTACGCGACCGCTTCAGTTCCGTGGCTACTCCTATCC GCCAGCTGAAAGCATTCAGGAAAGACCTGATTAAAGCCGGTGCAACAAACACTTTCACACTAAAGCTTCCCATCTCGGAG CTGGCACTTTGGAATGCCCGTATGCAGGAAGTGGTGGAACCGGGAGAGTTTGAGATTCAGATAGGAAGTACCGCTGACAA TATCCACTTCACGAAGGTGATAACTGTGAAGGGAAAATGA
Upstream 100 bases:
>100_bases GCCGGGTGAAAATAAAGAGATTACTATTAACTTTGACAAGTCTTTGTTGAAAGGCGGTTCTTACAAATTACTGGTTACAC CTTATAATAACTAACTTGCT
Downstream 100 bases:
>100_bases CACCGAACGACAAAAAACGAAGAGGTCTGTTTCTGACGATAGGGTTGTTTATACTGCCGATTCAGCTGGTCATTAATCAT TTCTATGGCGGTATTACGGT
Product: periplasmic beta-glucosidase
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 759; Mature: 758
Protein sequence:
>759_residues MTLRNITCAVTLCLLTLSGQAVGKTEVPPYKNKSLSIEKRVDDLMGRMTLREKVLQLQNRGAGRLDEIDRIFNGESYGCT HEMGTTAAECAAMYKELQQYMLTKTRLGIPIITSAEGIQGILQNNCTLFPHALAQGSTFNPALIQRMTEAAGEEAKVIGI HQILSPVLDIARELRWGRVEETFGEDPYLISEMGIAFINGYQKNRITCMPKHFVAHGTPSGGLNCAQVSGGERELRSLYL YPFRRVIKETNPLALMTCYSAYDGVAITGSPYYMTDILRGELGFKGYVYSDWGSVDRLKTFHAITPETDEAGRLALEAGV DLNIDSAYDNFERMVQDGRLDIKYIDLAVRRILTVKFQLGLFDAPYGDPKAVSKVVRSAEKVALAKEIADESAILLENKN QILPLDLAKYKSIAVVGPNSNQTIYGDYAWTTRDTKEGVTLLQGLKEVLGNKVTVRHAEGCDWWSSKKDKIAEAVEAVRG SDLAIVAVGTRSTYLGRSPKYSTTGEGFDLSSLELPGVQEELLQEIKKTGKPMVVVLIAGKPLAMPWVKENADALLVQWY GGEQQGRSLADILVGKVNPSGRLNVSFPRSTGNTPCFYNHFITDRNEPFDQPGSPEEPKGHYIFDAPDPLWSFGSGQSYT TFEYVDCALSDSVLTDKDQLTVTVKVKNTGKMDGKEVVQLYVRDRFSSVATPIRQLKAFRKDLIKAGATNTFTLKLPISE LALWNARMQEVVEPGEFEIQIGSTADNIHFTKVITVKGK
Sequences:
>Translated_759_residues MTLRNITCAVTLCLLTLSGQAVGKTEVPPYKNKSLSIEKRVDDLMGRMTLREKVLQLQNRGAGRLDEIDRIFNGESYGCT HEMGTTAAECAAMYKELQQYMLTKTRLGIPIITSAEGIQGILQNNCTLFPHALAQGSTFNPALIQRMTEAAGEEAKVIGI HQILSPVLDIARELRWGRVEETFGEDPYLISEMGIAFINGYQKNRITCMPKHFVAHGTPSGGLNCAQVSGGERELRSLYL YPFRRVIKETNPLALMTCYSAYDGVAITGSPYYMTDILRGELGFKGYVYSDWGSVDRLKTFHAITPETDEAGRLALEAGV DLNIDSAYDNFERMVQDGRLDIKYIDLAVRRILTVKFQLGLFDAPYGDPKAVSKVVRSAEKVALAKEIADESAILLENKN QILPLDLAKYKSIAVVGPNSNQTIYGDYAWTTRDTKEGVTLLQGLKEVLGNKVTVRHAEGCDWWSSKKDKIAEAVEAVRG SDLAIVAVGTRSTYLGRSPKYSTTGEGFDLSSLELPGVQEELLQEIKKTGKPMVVVLIAGKPLAMPWVKENADALLVQWY GGEQQGRSLADILVGKVNPSGRLNVSFPRSTGNTPCFYNHFITDRNEPFDQPGSPEEPKGHYIFDAPDPLWSFGSGQSYT TFEYVDCALSDSVLTDKDQLTVTVKVKNTGKMDGKEVVQLYVRDRFSSVATPIRQLKAFRKDLIKAGATNTFTLKLPISE LALWNARMQEVVEPGEFEIQIGSTADNIHFTKVITVKGK >Mature_758_residues TLRNITCAVTLCLLTLSGQAVGKTEVPPYKNKSLSIEKRVDDLMGRMTLREKVLQLQNRGAGRLDEIDRIFNGESYGCTH EMGTTAAECAAMYKELQQYMLTKTRLGIPIITSAEGIQGILQNNCTLFPHALAQGSTFNPALIQRMTEAAGEEAKVIGIH QILSPVLDIARELRWGRVEETFGEDPYLISEMGIAFINGYQKNRITCMPKHFVAHGTPSGGLNCAQVSGGERELRSLYLY PFRRVIKETNPLALMTCYSAYDGVAITGSPYYMTDILRGELGFKGYVYSDWGSVDRLKTFHAITPETDEAGRLALEAGVD LNIDSAYDNFERMVQDGRLDIKYIDLAVRRILTVKFQLGLFDAPYGDPKAVSKVVRSAEKVALAKEIADESAILLENKNQ ILPLDLAKYKSIAVVGPNSNQTIYGDYAWTTRDTKEGVTLLQGLKEVLGNKVTVRHAEGCDWWSSKKDKIAEAVEAVRGS DLAIVAVGTRSTYLGRSPKYSTTGEGFDLSSLELPGVQEELLQEIKKTGKPMVVVLIAGKPLAMPWVKENADALLVQWYG GEQQGRSLADILVGKVNPSGRLNVSFPRSTGNTPCFYNHFITDRNEPFDQPGSPEEPKGHYIFDAPDPLWSFGSGQSYTT FEYVDCALSDSVLTDKDQLTVTVKVKNTGKMDGKEVVQLYVRDRFSSVATPIRQLKAFRKDLIKAGATNTFTLKLPISEL ALWNARMQEVVEPGEFEIQIGSTADNIHFTKVITVKGK
Specific function: Unknown
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=758, Percent_Identity=31.1345646437995, Blast_Score=360, Evalue=1e-100,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 83933; Mature: 83802
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLRNITCAVTLCLLTLSGQAVGKTEVPPYKNKSLSIEKRVDDLMGRMTLREKVLQLQNR CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC GAGRLDEIDRIFNGESYGCTHEMGTTAAECAAMYKELQQYMLTKTRLGIPIITSAEGIQG CCCCHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHH ILQNNCTLFPHALAQGSTFNPALIQRMTEAAGEEAKVIGIHQILSPVLDIARELRWGRVE HHHCCCEEEEHHHCCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCCCHH ETFGEDPYLISEMGIAFINGYQKNRITCMPKHFVAHGTPSGGLNCAQVSGGERELRSLYL HHCCCCCEEHHHCCHHHHCCCCCCCEEECCHHHEECCCCCCCCEEEECCCCHHHHHHHHH YPFRRVIKETNPLALMTCYSAYDGVAITGSPYYMTDILRGELGFKGYVYSDWGSVDRLKT HHHHHHHHCCCCEEEEEEECCCCCEEEECCCHHHHHHHHCCCCCCEEEECCCCCHHHHHH FHAITPETDEAGRLALEAGVDLNIDSAYDNFERMVQDGRLDIKYIDLAVRRILTVKFQLG HCCCCCCCCCCCCEEEECCCCEEECHHHHHHHHHHHCCCCEEEHHHHHHHHHHEEEEEEC LFDAPYGDPKAVSKVVRSAEKVALAKEIADESAILLENKNQILPLDLAKYKSIAVVGPNS CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEHHCCCEEEEECCCC NQTIYGDYAWTTRDTKEGVTLLQGLKEVLGNKVTVRHAEGCDWWSSKKDKIAEAVEAVRG CCEEEECEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCC SDLAIVAVGTRSTYLGRSPKYSTTGEGFDLSSLELPGVQEELLQEIKKTGKPMVVVLIAG CCEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECC KPLAMPWVKENADALLVQWYGGEQQGRSLADILVGKVNPSGRLNVSFPRSTGNTPCFYNH CCCCCCHHHCCCCEEEEEEECCCHHCCCEEHHHEECCCCCCEEEEEECCCCCCCCEEEEE FITDRNEPFDQPGSPEEPKGHYIFDAPDPLWSFGSGQSYTTFEYVDCALSDSVLTDKDQL EECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEHHEEHHHHCCCEECCCCCE TVTVKVKNTGKMDGKEVVQLYVRDRFSSVATPIRQLKAFRKDLIKAGATNTFTLKLPISE EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHH LALWNARMQEVVEPGEFEIQIGSTADNIHFTKVITVKGK HHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEEEEECC >Mature Secondary Structure TLRNITCAVTLCLLTLSGQAVGKTEVPPYKNKSLSIEKRVDDLMGRMTLREKVLQLQNR CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC GAGRLDEIDRIFNGESYGCTHEMGTTAAECAAMYKELQQYMLTKTRLGIPIITSAEGIQG CCCCHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHH ILQNNCTLFPHALAQGSTFNPALIQRMTEAAGEEAKVIGIHQILSPVLDIARELRWGRVE HHHCCCEEEEHHHCCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCCCHH ETFGEDPYLISEMGIAFINGYQKNRITCMPKHFVAHGTPSGGLNCAQVSGGERELRSLYL HHCCCCCEEHHHCCHHHHCCCCCCCEEECCHHHEECCCCCCCCEEEECCCCHHHHHHHHH YPFRRVIKETNPLALMTCYSAYDGVAITGSPYYMTDILRGELGFKGYVYSDWGSVDRLKT HHHHHHHHCCCCEEEEEEECCCCCEEEECCCHHHHHHHHCCCCCCEEEECCCCCHHHHHH FHAITPETDEAGRLALEAGVDLNIDSAYDNFERMVQDGRLDIKYIDLAVRRILTVKFQLG HCCCCCCCCCCCCEEEECCCCEEECHHHHHHHHHHHCCCCEEEHHHHHHHHHHEEEEEEC LFDAPYGDPKAVSKVVRSAEKVALAKEIADESAILLENKNQILPLDLAKYKSIAVVGPNS CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEHHCCCEEEEECCCC NQTIYGDYAWTTRDTKEGVTLLQGLKEVLGNKVTVRHAEGCDWWSSKKDKIAEAVEAVRG CCEEEECEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCC SDLAIVAVGTRSTYLGRSPKYSTTGEGFDLSSLELPGVQEELLQEIKKTGKPMVVVLIAG CCEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECC KPLAMPWVKENADALLVQWYGGEQQGRSLADILVGKVNPSGRLNVSFPRSTGNTPCFYNH CCCCCCHHHCCCCEEEEEEECCCHHCCCEEHHHEECCCCCCEEEEEECCCCCCCCEEEEE FITDRNEPFDQPGSPEEPKGHYIFDAPDPLWSFGSGQSYTTFEYVDCALSDSVLTDKDQL EECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEHHEEHHHHCCCEECCCCCE TVTVKVKNTGKMDGKEVVQLYVRDRFSSVATPIRQLKAFRKDLIKAGATNTFTLKLPISE EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHH LALWNARMQEVVEPGEFEIQIGSTADNIHFTKVITVKGK HHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]