| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348197
Identifier: 29348197
GI number: 29348197
Start: 3458531
End: 3459055
Strand: Reverse
Name: 29348197
Synonym: BT_2788
Alternate gene names: NA
Gene position: 3459055-3458531 (Counterclockwise)
Preceding gene: 29348198
Following gene: 29348195
Centisome position: 55.25
GC content: 43.81
Gene sequence:
>525_bases ATGATATATTTACAGTTACTTTGGGTGTATCTGAAGATAGGTACGTTTGGTTTCGGAGGTGGTTATGCGATGCTTTCGTT GATTCAGCATGAAATTGTAGATCTCCACCATTGGCTGACTCCCCAACAATTTACGGATGTGGTGGCAATTTCGCAGATGA CTCCGGGGCCGATTGGAATTAATAGTGCTACTTATGTGGGCTATGCAGTGACACACAGTGTATGGGGAGCGGTACTTGCT ACCGTAGCGGTGTGTCTGCCCTCTTTTATTCTCGTATTGCTCATTTCCTATTTCTTTGCGAAATGCAAGGATAATAAATA CATAAAAGCAGCGATGTCCGGCTTGCTTCCCATGTCAGTGGCATTGATTGCCTCGGCTGCCTTGTTGATGATGAACAGGG AGAATTTTATTGATTATAAAAGTATAGGAATCTTTGCTGGGGCATTCCTTATCACCTGGAAATGGGATTTGCATCCTATT CTGCTGATTTGTCTGGCAGGTCTGGTGGGGGTGATCTTGTATTAA
Upstream 100 bases:
>100_bases GGCAATTCGGGCTTTCTCCTATTTATGTGGTATTGGCGGGGATTTCCGGTGGATTAGTGTATACTCTGTGGTTGAAAAAT AAGATTAAAGATATAAAGGC
Downstream 100 bases:
>100_bases AAAAACTTTTTATAAAGCTAGGGTTGGCTACTGGATCGTAAAGAAGTTGCTTAATATGCATGAACTGGAAATAGAAAAAG CCCGCTAAATAAAATCCGGC
Product: chromate transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MIYLQLLWVYLKIGTFGFGGGYAMLSLIQHEIVDLHHWLTPQQFTDVVAISQMTPGPIGINSATYVGYAVTHSVWGAVLA TVAVCLPSFILVLLISYFFAKCKDNKYIKAAMSGLLPMSVALIASAALLMMNRENFIDYKSIGIFAGAFLITWKWDLHPI LLICLAGLVGVILY
Sequences:
>Translated_174_residues MIYLQLLWVYLKIGTFGFGGGYAMLSLIQHEIVDLHHWLTPQQFTDVVAISQMTPGPIGINSATYVGYAVTHSVWGAVLA TVAVCLPSFILVLLISYFFAKCKDNKYIKAAMSGLLPMSVALIASAALLMMNRENFIDYKSIGIFAGAFLITWKWDLHPI LLICLAGLVGVILY >Mature_174_residues MIYLQLLWVYLKIGTFGFGGGYAMLSLIQHEIVDLHHWLTPQQFTDVVAISQMTPGPIGINSATYVGYAVTHSVWGAVLA TVAVCLPSFILVLLISYFFAKCKDNKYIKAAMSGLLPMSVALIASAALLMMNRENFIDYKSIGIFAGAFLITWKWDLHPI LLICLAGLVGVILY
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 - InterPro: IPR014047 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 19163; Mature: 19163
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYLQLLWVYLKIGTFGFGGGYAMLSLIQHEIVDLHHWLTPQQFTDVVAISQMTPGPIGI CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCC NSATYVGYAVTHSVWGAVLATVAVCLPSFILVLLISYFFAKCKDNKYIKAAMSGLLPMSV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ALIASAALLMMNRENFIDYKSIGIFAGAFLITWKWDLHPILLICLAGLVGVILY HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIYLQLLWVYLKIGTFGFGGGYAMLSLIQHEIVDLHHWLTPQQFTDVVAISQMTPGPIGI CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCC NSATYVGYAVTHSVWGAVLATVAVCLPSFILVLLISYFFAKCKDNKYIKAAMSGLLPMSV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ALIASAALLMMNRENFIDYKSIGIFAGAFLITWKWDLHPILLICLAGLVGVILY HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]