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The map label for this gene is rplJ [H]

Identifier: 29348145

GI number: 29348145

Start: 3391276

End: 3391794

Strand: Reverse

Name: rplJ [H]

Synonym: BT_2736

Alternate gene names: 29348145

Gene position: 3391794-3391276 (Counterclockwise)

Preceding gene: 29348146

Following gene: 29348144

Centisome position: 54.18

GC content: 41.04

Gene sequence:

>519_bases
ATGAGAAAGGAAGATAAAAATTCGATTATAGAGCAAATTGCTGCTACAGTAAAGGAATATGGCCACTTCTATTTGGTAGA
CGTTACAGCGATGAACGCTACTGCTACAAGTGCATTGAGAAGAGATTGTTTCAAGTCTGACATCAAATTGATGGTAGTTA
AGAATACATTGCTTCACAAAGCTCTTGAAAGCCTGGAAGAAGACTTTTCTCCTCTTTACGGTTCTTTGAAAGGTACAACT
GCTGTTATGTTTTGCAATACTGCAAACGTACCTGCTAAACTGATCAAGGACAAAGCTAAAGACGGAATTCCCGGACTGAA
AGCTGCATATGCAGAAGAAAGCTTCTACGTTGGTGCAGACCAATTGGATGCTCTCGTTGCTATCAAGAGTAAGAACGAAG
TTATCGCCGATATCGTTGCATTGTTGCAATCTCCGGCCAAGAATGTTATTTCTGCTCTTCAATCAGGTGGTAACACCCTT
CACGGAGTTCTCAAAACTCTTGGTGAGAGACCCGAATAA

Upstream 100 bases:

>100_bases
GGGTACATATATTAAGAGTATTTATCTTTCTAGTACAATGAGTGCGGGTATCAAAATCGACCCGAAATCAGTGGATGAAA
TCTAATAAAACAGAGAAATA

Downstream 100 bases:

>100_bases
TTTTCAAAAAACAACAAAGTATTTAAACAATTAAAATCATACAAAAAATGGCAGATTTGAAAGCTTTTGCAGAACAATTA
GTTAACTTGACAGTAAAAGA

Product: 50S ribosomal protein L10

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MRKEDKNSIIEQIAATVKEYGHFYLVDVTAMNATATSALRRDCFKSDIKLMVVKNTLLHKALESLEEDFSPLYGSLKGTT
AVMFCNTANVPAKLIKDKAKDGIPGLKAAYAEESFYVGADQLDALVAIKSKNEVIADIVALLQSPAKNVISALQSGGNTL
HGVLKTLGERPE

Sequences:

>Translated_172_residues
MRKEDKNSIIEQIAATVKEYGHFYLVDVTAMNATATSALRRDCFKSDIKLMVVKNTLLHKALESLEEDFSPLYGSLKGTT
AVMFCNTANVPAKLIKDKAKDGIPGLKAAYAEESFYVGADQLDALVAIKSKNEVIADIVALLQSPAKNVISALQSGGNTL
HGVLKTLGERPE
>Mature_172_residues
MRKEDKNSIIEQIAATVKEYGHFYLVDVTAMNATATSALRRDCFKSDIKLMVVKNTLLHKALESLEEDFSPLYGSLKGTT
AVMFCNTANVPAKLIKDKAKDGIPGLKAAYAEESFYVGADQLDALVAIKSKNEVIADIVALLQSPAKNVISALQSGGNTL
HGVLKTLGERPE

Specific function: Unknown

COG id: COG0244

COG function: function code J; Ribosomal protein L10

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L10P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022973
- InterPro:   IPR001790 [H]

Pfam domain/function: PF00466 Ribosomal_L10 [H]

EC number: NA

Molecular weight: Translated: 18601; Mature: 18601

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKEDKNSIIEQIAATVKEYGHFYLVDVTAMNATATSALRRDCFKSDIKLMVVKNTLLHK
CCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHCHHHHHHHHHHHHH
ALESLEEDFSPLYGSLKGTTAVMFCNTANVPAKLIKDKAKDGIPGLKAAYAEESFYVGAD
HHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHCCCEECCHH
QLDALVAIKSKNEVIADIVALLQSPAKNVISALQSGGNTLHGVLKTLGERPE
HHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MRKEDKNSIIEQIAATVKEYGHFYLVDVTAMNATATSALRRDCFKSDIKLMVVKNTLLHK
CCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHCHHHHHHHHHHHHH
ALESLEEDFSPLYGSLKGTTAVMFCNTANVPAKLIKDKAKDGIPGLKAAYAEESFYVGAD
HHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHCCCEECCHH
QLDALVAIKSKNEVIADIVALLQSPAKNVISALQSGGNTLHGVLKTLGERPE
HHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA