Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348108

Identifier: 29348108

GI number: 29348108

Start: 3363332

End: 3363727

Strand: Reverse

Name: 29348108

Synonym: BT_2699

Alternate gene names: NA

Gene position: 3363727-3363332 (Counterclockwise)

Preceding gene: 29348109

Following gene: 29348107

Centisome position: 53.73

GC content: 41.16

Gene sequence:

>396_bases
ATGGCAAAATTTGTAAAGGTAATATTGTTTCTGTTGCTGGCGGTTGCCCTTCATGGGGTCGCAGGCAATGTTTTCACTGA
AAAGCAGGTGGAACAACCAGAGCATGCTGTTACATATTCTATGAAACCGCAGGGGCAGATTAATGCTCCAGAATCTCCTT
ATCTTCCTGTGGCTGAATTAACTAATTTGCAAAGCCATCAGATATCGGTGACACGCATCCAACGTGTGCAAATCGGTGAA
TACTTCTCTTCTCTGAGAAATGTGCTGCAATGTTGTGCAGACCGTGATAACTCGCTGTCACAGCATTGGGGAAGGATTTA
TAATACTACAACTTCCTATTATTGCCAGCCTGCAAGTGAATATTATGTATTTACTTTAAGGCATATTATTATTTAG

Upstream 100 bases:

>100_bases
GCCTTTTTTGTATCCTTATGTTTTAGTTATCCTAAGATACATTAAAAGATTTACCGAATGAACTTTTCATAAGAATTATC
TGTTATATTTGCAGGAGAAT

Downstream 100 bases:

>100_bases
ACGTTTATTTATTGGTATTATTTTACGGATTGCTGGCGTTAATTATATAGTGCCGGTCAGTCTTTATTATCTTCATATTT
TTACTAATAATTTAAACTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MAKFVKVILFLLLAVALHGVAGNVFTEKQVEQPEHAVTYSMKPQGQINAPESPYLPVAELTNLQSHQISVTRIQRVQIGE
YFSSLRNVLQCCADRDNSLSQHWGRIYNTTTSYYCQPASEYYVFTLRHIII

Sequences:

>Translated_131_residues
MAKFVKVILFLLLAVALHGVAGNVFTEKQVEQPEHAVTYSMKPQGQINAPESPYLPVAELTNLQSHQISVTRIQRVQIGE
YFSSLRNVLQCCADRDNSLSQHWGRIYNTTTSYYCQPASEYYVFTLRHIII
>Mature_130_residues
AKFVKVILFLLLAVALHGVAGNVFTEKQVEQPEHAVTYSMKPQGQINAPESPYLPVAELTNLQSHQISVTRIQRVQIGEY
FSSLRNVLQCCADRDNSLSQHWGRIYNTTTSYYCQPASEYYVFTLRHIII

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14934; Mature: 14803

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKFVKVILFLLLAVALHGVAGNVFTEKQVEQPEHAVTYSMKPQGQINAPESPYLPVAEL
CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHEEECCCCCCCCCCCCCCCCCHHHH
TNLQSHQISVTRIQRVQIGEYFSSLRNVLQCCADRDNSLSQHWGRIYNTTTSYYCQPASE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEECCCCH
YYVFTLRHIII
HHHHHHHHHHC
>Mature Secondary Structure 
AKFVKVILFLLLAVALHGVAGNVFTEKQVEQPEHAVTYSMKPQGQINAPESPYLPVAEL
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHEEECCCCCCCCCCCCCCCCCHHHH
TNLQSHQISVTRIQRVQIGEYFSSLRNVLQCCADRDNSLSQHWGRIYNTTTSYYCQPASE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEECCCCH
YYVFTLRHIII
HHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA