Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348060

Identifier: 29348060

GI number: 29348060

Start: 3302647

End: 3303348

Strand: Reverse

Name: 29348060

Synonym: BT_2650

Alternate gene names: NA

Gene position: 3303348-3302647 (Counterclockwise)

Preceding gene: 29348061

Following gene: 29348051

Centisome position: 52.77

GC content: 48.43

Gene sequence:

>702_bases
ATGAAAAAAGAAAAAGATTTGTCTGTCGCGGTTTTGATTGACGGCGATAATGCTTCTTCCGAGAAGATGGAAGATGTGAT
GCGGTTCGTATCCCGCTATGGTGCTGCCGTTGTGAGACGTATATATGGTGACTGGACTAAAAAATCCCTTTCCGGTTGGA
AGGATGCGGCAAGGGATTATTCGTTCAGGATGGTGCAGGCTTCCTCTTTTGTGCCGGGAAAGAATACGACGGATATCGCG
TTGGTTATGGATGCGATGGACATCCTTCATGAGGGGCGGGTCGGTTGTTTTTGTCTGGTCGCCAGTGACGGGGATTATAC
CCTGCTGGCACAACGTATCAGGGAGAGTGGTCTGACGGTCCTCGGTTACGGGGAGGGAAAGACTCCGGCGGCACTGGTAC
GTTCCTGTACTGAGTTTCTATTGGCTGACCGGAAGGAGGAGAAGCCTTTTCAGGAAAATACACCTGAATTTTTTATTCAA
AGAGATATGGAATACTTTGATAAGGCTTTTGAACAGGCTGCTGACGGTAAGGCGGAGGTCAGCTTGTCTTTGATTGGAGG
GGTGCTGAAGAAGCTGATGCCCAAATTCAAAGTGAAAAGGTATGGCTGCAGGACGCTCGGCAAATTGTATGAAAGGCTTG
AGAAATACGAACTGGTTAAAACGGGGAAGGGTGTTGCCGGATTAGTGCGGATTAAATCCTGA

Upstream 100 bases:

>100_bases
GGAAATACAGGATTTTTTGCGGCATAGGGGAAAGAAAAAATAGGTTCAATTATTTATATTTGCGGGAACCTGTTATATTT
TTGCAGCTTAAGGATTCGGT

Downstream 100 bases:

>100_bases
ATCCGGTTCCGGTTTTATACGGATTGAAAAAAAATACCGATGCTTCCCTTGCCGCAGCAACTGTTGGCGGCAAGGGCGGC
TGTCTGTTTCACATGGCTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MKKEKDLSVAVLIDGDNASSEKMEDVMRFVSRYGAAVVRRIYGDWTKKSLSGWKDAARDYSFRMVQASSFVPGKNTTDIA
LVMDAMDILHEGRVGCFCLVASDGDYTLLAQRIRESGLTVLGYGEGKTPAALVRSCTEFLLADRKEEKPFQENTPEFFIQ
RDMEYFDKAFEQAADGKAEVSLSLIGGVLKKLMPKFKVKRYGCRTLGKLYERLEKYELVKTGKGVAGLVRIKS

Sequences:

>Translated_233_residues
MKKEKDLSVAVLIDGDNASSEKMEDVMRFVSRYGAAVVRRIYGDWTKKSLSGWKDAARDYSFRMVQASSFVPGKNTTDIA
LVMDAMDILHEGRVGCFCLVASDGDYTLLAQRIRESGLTVLGYGEGKTPAALVRSCTEFLLADRKEEKPFQENTPEFFIQ
RDMEYFDKAFEQAADGKAEVSLSLIGGVLKKLMPKFKVKRYGCRTLGKLYERLEKYELVKTGKGVAGLVRIKS
>Mature_233_residues
MKKEKDLSVAVLIDGDNASSEKMEDVMRFVSRYGAAVVRRIYGDWTKKSLSGWKDAARDYSFRMVQASSFVPGKNTTDIA
LVMDAMDILHEGRVGCFCLVASDGDYTLLAQRIRESGLTVLGYGEGKTPAALVRSCTEFLLADRKEEKPFQENTPEFFIQ
RDMEYFDKAFEQAADGKAEVSLSLIGGVLKKLMPKFKVKRYGCRTLGKLYERLEKYELVKTGKGVAGLVRIKS

Specific function: Unknown

COG id: COG1432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26116; Mature: 26116

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKEKDLSVAVLIDGDNASSEKMEDVMRFVSRYGAAVVRRIYGDWTKKSLSGWKDAARDY
CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
SFRMVQASSFVPGKNTTDIALVMDAMDILHEGRVGCFCLVASDGDYTLLAQRIRESGLTV
HEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCEE
LGYGEGKTPAALVRSCTEFLLADRKEEKPFQENTPEFFIQRDMEYFDKAFEQAADGKAEV
EEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
SLSLIGGVLKKLMPKFKVKRYGCRTLGKLYERLEKYELVKTGKGVAGLVRIKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC
>Mature Secondary Structure
MKKEKDLSVAVLIDGDNASSEKMEDVMRFVSRYGAAVVRRIYGDWTKKSLSGWKDAARDY
CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
SFRMVQASSFVPGKNTTDIALVMDAMDILHEGRVGCFCLVASDGDYTLLAQRIRESGLTV
HEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCEE
LGYGEGKTPAALVRSCTEFLLADRKEEKPFQENTPEFFIQRDMEYFDKAFEQAADGKAEV
EEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
SLSLIGGVLKKLMPKFKVKRYGCRTLGKLYERLEKYELVKTGKGVAGLVRIKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA