Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348049

Identifier: 29348049

GI number: 29348049

Start: 3291337

End: 3292290

Strand: Reverse

Name: 29348049

Synonym: BT_2639

Alternate gene names: NA

Gene position: 3292290-3291337 (Counterclockwise)

Preceding gene: 29348050

Following gene: 29348047

Centisome position: 52.59

GC content: 37.74

Gene sequence:

>954_bases
ATGCATTATTCAGATCATTTCCATAAAGTCTGCATAGCGAGTGAATTAAATGAATTTACAGATGCTTTTCGCATTATTTA
TTCATGGCTTTTCTCTTTAAAACTTTTAGAGCCTAAGTTCATGGATAAGGATTCTATCTTTTGTAGGTTATTTACAAGCA
TCCACTTTAGGCTAAAATATATTGCAGCTCCACATTATGAAGAAAGGAAAAGGCATCTGGAGACTTTGGAAAAGGATGGA
GTACCGAAGGCTTACATTAGAGAATATGCAGAGCAACAGCTTAATGTCATCAAGCAGTTTAAACTTGAACAAAAGCCTAT
AGGACATAGCTTCTCCACTGATGAAATCATTGATGCGGCCCGTTGTTTTGGAGAGTTATCAAATGGGATATCTGTTCGCA
GTAGATATCAGCGTTTCAGAGCTGTCTGTATGAGTTGGTTCTCATTCATGGAAGTTATCACAGGAAAAGATAAGAGTTAT
CCCGGCTCTAACTATGTGGACATGTTCTGTGAATGGCATCTCACCTCCAAAGGAAGCTCTGTCGGCGCTACGGTACATAT
ATGTCAGGAATTAGATAGATTCTTTGCTTATATCAACTCAAAAAGCGTAACGATCAACTTATTGACCGCGGCTTGTATCG
ACGGATATATTGAAACTTATCAATCCGCATGTTTCGCACGTAAGACTGTGGCCAGTAAGGTGTCAATTTTGAGGACTTTT
CTCAGATATCTATATAACAGAAGTATCATTAAAACAGACATGTCATCATACCTCATAAGCCCCCGAATTTATACATGTGA
GATTCTATCTGTTTCTCCAAACGAGAATGACCTTAATCGAATCTCTCATTTTTATGATGGTAACACTCCCTCTGCCATTA
GAAATAAAGCTATACTTCTTTTACTTATAGAATACGGAATGAGAAGTGGGGGAAGTTACCGGTTTAAAACTTAG

Upstream 100 bases:

>100_bases
CGTCCTATATTTTTACGCTACGCATGCTTTGCATTTACACGACGGGGAAAATGATATAGTTCCTATTGAGAATATCACCA
AAGTATGCCATGATTATCGG

Downstream 100 bases:

>100_bases
CGATATAGACTGGGAACGCGATGTTCTGTATCTTCACAGAGAAAAGGGACGCCGAAACAGCAGGTGCTGACGTTGAAAGC
TAATGTTGGAAACGCCATCC

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Integrase

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MHYSDHFHKVCIASELNEFTDAFRIIYSWLFSLKLLEPKFMDKDSIFCRLFTSIHFRLKYIAAPHYEERKRHLETLEKDG
VPKAYIREYAEQQLNVIKQFKLEQKPIGHSFSTDEIIDAARCFGELSNGISVRSRYQRFRAVCMSWFSFMEVITGKDKSY
PGSNYVDMFCEWHLTSKGSSVGATVHICQELDRFFAYINSKSVTINLLTAACIDGYIETYQSACFARKTVASKVSILRTF
LRYLYNRSIIKTDMSSYLISPRIYTCEILSVSPNENDLNRISHFYDGNTPSAIRNKAILLLLIEYGMRSGGSYRFKT

Sequences:

>Translated_317_residues
MHYSDHFHKVCIASELNEFTDAFRIIYSWLFSLKLLEPKFMDKDSIFCRLFTSIHFRLKYIAAPHYEERKRHLETLEKDG
VPKAYIREYAEQQLNVIKQFKLEQKPIGHSFSTDEIIDAARCFGELSNGISVRSRYQRFRAVCMSWFSFMEVITGKDKSY
PGSNYVDMFCEWHLTSKGSSVGATVHICQELDRFFAYINSKSVTINLLTAACIDGYIETYQSACFARKTVASKVSILRTF
LRYLYNRSIIKTDMSSYLISPRIYTCEILSVSPNENDLNRISHFYDGNTPSAIRNKAILLLLIEYGMRSGGSYRFKT
>Mature_317_residues
MHYSDHFHKVCIASELNEFTDAFRIIYSWLFSLKLLEPKFMDKDSIFCRLFTSIHFRLKYIAAPHYEERKRHLETLEKDG
VPKAYIREYAEQQLNVIKQFKLEQKPIGHSFSTDEIIDAARCFGELSNGISVRSRYQRFRAVCMSWFSFMEVITGKDKSY
PGSNYVDMFCEWHLTSKGSSVGATVHICQELDRFFAYINSKSVTINLLTAACIDGYIETYQSACFARKTVASKVSILRTF
LRYLYNRSIIKTDMSSYLISPRIYTCEILSVSPNENDLNRISHFYDGNTPSAIRNKAILLLLIEYGMRSGGSYRFKT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36849; Mature: 36849

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHYSDHFHKVCIASELNEFTDAFRIIYSWLFSLKLLEPKFMDKDSIFCRLFTSIHFRLKY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
IAAPHYEERKRHLETLEKDGVPKAYIREYAEQQLNVIKQFKLEQKPIGHSFSTDEIIDAA
HCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
RCFGELSNGISVRSRYQRFRAVCMSWFSFMEVITGKDKSYPGSNYVDMFCEWHLTSKGSS
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHEEEEECCCCCC
VGATVHICQELDRFFAYINSKSVTINLLTAACIDGYIETYQSACFARKTVASKVSILRTF
CHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRYLYNRSIIKTDMSSYLISPRIYTCEILSVSPNENDLNRISHFYDGNTPSAIRNKAILL
HHHHHCCHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHH
LLIEYGMRSGGSYRFKT
HEEHHCCCCCCCCCCCC
>Mature Secondary Structure
MHYSDHFHKVCIASELNEFTDAFRIIYSWLFSLKLLEPKFMDKDSIFCRLFTSIHFRLKY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
IAAPHYEERKRHLETLEKDGVPKAYIREYAEQQLNVIKQFKLEQKPIGHSFSTDEIIDAA
HCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
RCFGELSNGISVRSRYQRFRAVCMSWFSFMEVITGKDKSYPGSNYVDMFCEWHLTSKGSS
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHEEEEECCCCCC
VGATVHICQELDRFFAYINSKSVTINLLTAACIDGYIETYQSACFARKTVASKVSILRTF
CHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRYLYNRSIIKTDMSSYLISPRIYTCEILSVSPNENDLNRISHFYDGNTPSAIRNKAILL
HHHHHCCHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHH
LLIEYGMRSGGSYRFKT
HEEHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA