| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348035
Identifier: 29348035
GI number: 29348035
Start: 3271013
End: 3272995
Strand: Reverse
Name: 29348035
Synonym: BT_2625
Alternate gene names: NA
Gene position: 3272995-3271013 (Counterclockwise)
Preceding gene: 29348036
Following gene: 29348034
Centisome position: 52.28
GC content: 36.76
Gene sequence:
>1983_bases ATGAAAAATAAAATAATAATATTCATACAGTTTGGCATGCTTCTTTGTATGAGTTCATGTAATTTTCTTAACGTAGAAGA TGAGTTTAAAGATATGCTCTCTTATGATTCGGTATTTGCTAATAAAAGAAACGTGGAGAAATATTTATGGGCAACAGCAG CCAATTTTCCGGATGAGGGAAAATTGTTTCAATATCCTTACACTCCAGGTCCGTTAGCTAGCGATGAGGCCTTTACTACA TTTGGTAGTGACCAATTTCTAGGTATGGGGTTTGTCTTAGGTGAAATCACTCCTGATAATTCTGGAGGTTTGGGAAATTG GGGAACTATGTATAAGATTATACGAAAAACAAATTTGATATTTCGTAGAATAGATGAAGCGAAAGATCTAAAAACGACAG AAAAGTTAGAACTTCTTGCTTATACACGTTTTATGAGGGCATATGCTTATTATAATTTATTGATGGATTTTGGACCACTT GTCATACTGGGCGATGAAGTCATGGATAATAATGAAACTATAGATTATTATAATGCTCATCGGTCAACTTATGACGAATC GGTAGAGTATGTGTGTGGAGAACTGGAAGCTGCTGCAGTAAATCTTCCGATCACTGTACCTATTAGTCAGTTTGGACGAC CGACAAAAGGAGCAGCGTATGGTTTGATTGCACGATTAAGATTGCAACATGCTAGTCCGTTATATAATGGAGGCAGTGTG GCTAAAACGTATTTTGGTTCATGGAAAAGGAGTGTCGACAATGCACATTATATATCGCAAACGGAGAATGTGGAACGATG GGCATTAGCAGCAGCAGCTTGTGCACGAATTATAGATATGGGATTGTATGAACTTCATACAGTAAAAAGTGATATTAATA CTCCTAAATTGCCACAAGGTGTGTCAACTGAACCCTTTCCGGCAGGAGCAGGTGGTATAGATCCATTCAGATCTTATTCT GATATGTTTACGGGGGAAACTGTCCCACAAACAAACCCAGAATATATTTGGGGAAGAATGTCTAGTAGTATTGTGGATAT AACAAGACATTCTTTTAATGGAGATATTTTAGGAGGTTTCAATGGAATGTGTGTTCCACAAAAAGTGATAGATAAATATA AGATGGTGGATGGACGAAGTATTCAGAATTCGAGTTCTGAATATCCTTATTCTGAAGATGGAATGACTAATACGGGACGA ATGACATTCTCAGGGTATACATTGAATACTGGTATTAGCAATATGTATGCTAATCGTGAAATGCGTTTTTATGCTTCTAT AGGTTTTTCAAGACGTTATTGGATGGCTAGTTCTACAAGCGATACAAGAAAGAAAAATATAACTGTCACGTATGATAAAA ATGGTAATTCAGGTAGATACAGTAGTGCTAATGTGAAGAATGACTATCCGAGCACAGGTTATGTGATAACGAAATATATT CATGAATCAGATGCATGGAGTGGTGAGGGAGCACAACGAGTTGCCAAAGGATTTCCGATTATTCGTTATGCAGAAATTCT ATTATCTTATGCTGAAGCATTAAATAATCTAGGCAATACTTCTTTCACAGTTGTTCTTCCTGACGATTTCGAATATACAG CATATCGAAATCTTGATGAGATAGCAAAATCATTTAATCGAGTTCGTTATAGAGCTGGGCTTCCAGGACTGACGAATGAA GAATTGGAAGACCCAGTTAAAGTGCAAGAACAGATTATAGACGAACGCATGATAGAATTCTTATTTGAGAATCGCAGATA CTATGATGTTCGTAGATGGGGAATATATGAAGAGGTGGAAACTGAGCCTATCACGGGGATGGATATAGAATCTGCTGAGC CGGAATATTACAATAGAGTTATAGTGAATCATTCACGTGTGCGAAACAGAGTTATTAATAAAAAGATGATTTTTCTGCCT ATTTCTAGGACAGAGATAAGAAGAGTTAAAGATTTGGATCAAAATCCAGGATGGGCAAACTAA
Upstream 100 bases:
>100_bases GGATTATGGGACCCTGAACAGACCACTAAGAATGGTCGAGCTTATCCTATTCCTGCAACTTATTCATTACAAATGTATAT TAATTTTTAATTGTCAGAAT
Downstream 100 bases:
>100_bases AAATATATGATATGAAAAAATATATAAAAGTAATGATGGCTTTCGTTTTGGGCCTGTTAATGATAGGGTGTGATGAAGAT GCCATGTTTAGAGAAGAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 660; Mature: 660
Protein sequence:
>660_residues MKNKIIIFIQFGMLLCMSSCNFLNVEDEFKDMLSYDSVFANKRNVEKYLWATAANFPDEGKLFQYPYTPGPLASDEAFTT FGSDQFLGMGFVLGEITPDNSGGLGNWGTMYKIIRKTNLIFRRIDEAKDLKTTEKLELLAYTRFMRAYAYYNLLMDFGPL VILGDEVMDNNETIDYYNAHRSTYDESVEYVCGELEAAAVNLPITVPISQFGRPTKGAAYGLIARLRLQHASPLYNGGSV AKTYFGSWKRSVDNAHYISQTENVERWALAAAACARIIDMGLYELHTVKSDINTPKLPQGVSTEPFPAGAGGIDPFRSYS DMFTGETVPQTNPEYIWGRMSSSIVDITRHSFNGDILGGFNGMCVPQKVIDKYKMVDGRSIQNSSSEYPYSEDGMTNTGR MTFSGYTLNTGISNMYANREMRFYASIGFSRRYWMASSTSDTRKKNITVTYDKNGNSGRYSSANVKNDYPSTGYVITKYI HESDAWSGEGAQRVAKGFPIIRYAEILLSYAEALNNLGNTSFTVVLPDDFEYTAYRNLDEIAKSFNRVRYRAGLPGLTNE ELEDPVKVQEQIIDERMIEFLFENRRYYDVRRWGIYEEVETEPITGMDIESAEPEYYNRVIVNHSRVRNRVINKKMIFLP ISRTEIRRVKDLDQNPGWAN
Sequences:
>Translated_660_residues MKNKIIIFIQFGMLLCMSSCNFLNVEDEFKDMLSYDSVFANKRNVEKYLWATAANFPDEGKLFQYPYTPGPLASDEAFTT FGSDQFLGMGFVLGEITPDNSGGLGNWGTMYKIIRKTNLIFRRIDEAKDLKTTEKLELLAYTRFMRAYAYYNLLMDFGPL VILGDEVMDNNETIDYYNAHRSTYDESVEYVCGELEAAAVNLPITVPISQFGRPTKGAAYGLIARLRLQHASPLYNGGSV AKTYFGSWKRSVDNAHYISQTENVERWALAAAACARIIDMGLYELHTVKSDINTPKLPQGVSTEPFPAGAGGIDPFRSYS DMFTGETVPQTNPEYIWGRMSSSIVDITRHSFNGDILGGFNGMCVPQKVIDKYKMVDGRSIQNSSSEYPYSEDGMTNTGR MTFSGYTLNTGISNMYANREMRFYASIGFSRRYWMASSTSDTRKKNITVTYDKNGNSGRYSSANVKNDYPSTGYVITKYI HESDAWSGEGAQRVAKGFPIIRYAEILLSYAEALNNLGNTSFTVVLPDDFEYTAYRNLDEIAKSFNRVRYRAGLPGLTNE ELEDPVKVQEQIIDERMIEFLFENRRYYDVRRWGIYEEVETEPITGMDIESAEPEYYNRVIVNHSRVRNRVINKKMIFLP ISRTEIRRVKDLDQNPGWAN >Mature_660_residues MKNKIIIFIQFGMLLCMSSCNFLNVEDEFKDMLSYDSVFANKRNVEKYLWATAANFPDEGKLFQYPYTPGPLASDEAFTT FGSDQFLGMGFVLGEITPDNSGGLGNWGTMYKIIRKTNLIFRRIDEAKDLKTTEKLELLAYTRFMRAYAYYNLLMDFGPL VILGDEVMDNNETIDYYNAHRSTYDESVEYVCGELEAAAVNLPITVPISQFGRPTKGAAYGLIARLRLQHASPLYNGGSV AKTYFGSWKRSVDNAHYISQTENVERWALAAAACARIIDMGLYELHTVKSDINTPKLPQGVSTEPFPAGAGGIDPFRSYS DMFTGETVPQTNPEYIWGRMSSSIVDITRHSFNGDILGGFNGMCVPQKVIDKYKMVDGRSIQNSSSEYPYSEDGMTNTGR MTFSGYTLNTGISNMYANREMRFYASIGFSRRYWMASSTSDTRKKNITVTYDKNGNSGRYSSANVKNDYPSTGYVITKYI HESDAWSGEGAQRVAKGFPIIRYAEILLSYAEALNNLGNTSFTVVLPDDFEYTAYRNLDEIAKSFNRVRYRAGLPGLTNE ELEDPVKVQEQIIDERMIEFLFENRRYYDVRRWGIYEEVETEPITGMDIESAEPEYYNRVIVNHSRVRNRVINKKMIFLP ISRTEIRRVKDLDQNPGWAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75096; Mature: 75096
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKIIIFIQFGMLLCMSSCNFLNVEDEFKDMLSYDSVFANKRNVEKYLWATAANFPDEG CCCCEEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC KLFQYPYTPGPLASDEAFTTFGSDQFLGMGFVLGEITPDNSGGLGNWGTMYKIIRKTNLI CEEECCCCCCCCCCCCCEEECCCCCCEECEEEEEEECCCCCCCCCCHHHHHHHHHHHHHH FRRIDEAKDLKTTEKLELLAYTRFMRAYAYYNLLMDFGPLVILGDEVMDNNETIDYYNAH HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHCCCCCCEEEECCC RSTYDESVEYVCGELEAAAVNLPITVPISQFGRPTKGAAYGLIARLRLQHASPLYNGGSV CHHHHHHHHHHHCCCCEEEEECEEECCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCH AKTYFGSWKRSVDNAHYISQTENVERWALAAAACARIIDMGLYELHTVKSDINTPKLPQG HHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC VSTEPFPAGAGGIDPFRSYSDMFTGETVPQTNPEYIWGRMSSSIVDITRHSFNGDILGGF CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEHHHCCHHHHHHHHCCCCCEEECC NGMCVPQKVIDKYKMVDGRSIQNSSSEYPYSEDGMTNTGRMTFSGYTLNTGISNMYANRE CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECEEECCCCHHHHCCCC MRFYASIGFSRRYWMASSTSDTRKKNITVTYDKNGNSGRYSSANVKNDYPSTGYVITKYI EEEEEECCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEE HESDAWSGEGAQRVAKGFPIIRYAEILLSYAEALNNLGNTSFTVVLPDDFEYTAYRNLDE ECCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHCCHHH IAKSFNRVRYRAGLPGLTNEELEDPVKVQEQIIDERMIEFLFENRRYYDVRRWGIYEEVE HHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCCHHHHC TEPITGMDIESAEPEYYNRVIVNHSRVRNRVINKKMIFLPISRTEIRRVKDLDQNPGWAN CCCCCCCCCCCCCCHHHHHHEECHHHHHHHHHCCEEEEEECCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKNKIIIFIQFGMLLCMSSCNFLNVEDEFKDMLSYDSVFANKRNVEKYLWATAANFPDEG CCCCEEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC KLFQYPYTPGPLASDEAFTTFGSDQFLGMGFVLGEITPDNSGGLGNWGTMYKIIRKTNLI CEEECCCCCCCCCCCCCEEECCCCCCEECEEEEEEECCCCCCCCCCHHHHHHHHHHHHHH FRRIDEAKDLKTTEKLELLAYTRFMRAYAYYNLLMDFGPLVILGDEVMDNNETIDYYNAH HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHCCCCCCEEEECCC RSTYDESVEYVCGELEAAAVNLPITVPISQFGRPTKGAAYGLIARLRLQHASPLYNGGSV CHHHHHHHHHHHCCCCEEEEECEEECCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCH AKTYFGSWKRSVDNAHYISQTENVERWALAAAACARIIDMGLYELHTVKSDINTPKLPQG HHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC VSTEPFPAGAGGIDPFRSYSDMFTGETVPQTNPEYIWGRMSSSIVDITRHSFNGDILGGF CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEHHHCCHHHHHHHHCCCCCEEECC NGMCVPQKVIDKYKMVDGRSIQNSSSEYPYSEDGMTNTGRMTFSGYTLNTGISNMYANRE CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECEEECCCCHHHHCCCC MRFYASIGFSRRYWMASSTSDTRKKNITVTYDKNGNSGRYSSANVKNDYPSTGYVITKYI EEEEEECCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEE HESDAWSGEGAQRVAKGFPIIRYAEILLSYAEALNNLGNTSFTVVLPDDFEYTAYRNLDE ECCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHCCHHH IAKSFNRVRYRAGLPGLTNEELEDPVKVQEQIIDERMIEFLFENRRYYDVRRWGIYEEVE HHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCCHHHHC TEPITGMDIESAEPEYYNRVIVNHSRVRNRVINKKMIFLPISRTEIRRVKDLDQNPGWAN CCCCCCCCCCCCCCHHHHHHEECHHHHHHHHHCCEEEEEECCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA