| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348031
Identifier: 29348031
GI number: 29348031
Start: 3264883
End: 3266193
Strand: Reverse
Name: 29348031
Synonym: BT_2621
Alternate gene names: NA
Gene position: 3266193-3264883 (Counterclockwise)
Preceding gene: 29348032
Following gene: 29348030
Centisome position: 52.17
GC content: 35.09
Gene sequence:
>1311_bases ATGTATAGAGTTTTAATTATTTCAGTTGTGATAGGATGGGCTATTAATATAAAAGCCCAGATAAAAGTGGCTTGTGTTGG TAATAGTATTACAGAAAATATAGCTTTATCAAATGAACAAAAATATCCCTCCATTTTGCAAGACCTTTTGGGAAATGGAT ATATTGTTCGCAATTATGGTATTGGAGCACGTACAGTGCTGAAAAAAGGAGATTATCCATATTGGAATGAAGAGCGATAT AAAGAAGTGCTTGCGTGGAATCCTGATATTGTAATTGTAAAAATGGGAACAAATGATGCGAAAGCGCAGAATTGGGCTTA TAAAGATAATTTTGAAAGTGATTATATTGAATTTATACTTTCTTTTCAGACTTTGCCAAGTCATCCGAAAGTCTTTATTT GTTATCCCATTCCAACGTTTAAAGATAATTTCCTTCCTGTAGAGGATCAGCTTCTTGTAAAAGAAATGATGCCAATGATA GATAATATATCCAAGGCAACTTGTGCTGACATTATAGATTTACATACACCTTTGGTTGGAAAGGATGATTGTGTGTATGA CAAAGTACATCCTAATGAGAAAGGTACGAAGATTATGGCGCGTGTTATTGCACGAAAAATATGTCCGCATAGAAAGTTTC CTTTTCCCCCAGAAAAAAAGATAAATGTTGTATTTGTTGGTAATAGTATTACAGAAGCTACATACTTGAAAATTACTCCG CCTGAATGGACAACTATTTATTTAGATAGTTTGGGGTATGATGTACAGTCTGTAAATTGTGGAAAAAGTGGTTATACAAC TTTTGATTTCCTTCCTGGTAAAGGTGGTTTTAAATATGTGATAAGAAAAGCCGATGAGCTATATAAGAAAGATAAAAGAA ATCTTGTGTTTTCTTTTTGTTTGGGAGTAAATGATAGCGCTTGTACCGGAACCAATGGAGCACCTGTTTCGGCTGAACAA TATGAAAGCAATATGCAGTTGATTATTGATAGCTTATGTTTTCGATTTCCCGAGGCAAAAGTGGTGTTGCATTATCCTAT CTGGTATAGCCCTAACACGTATAATAGTGCTATGTATCTTAAGGAGGGATTAAAACGTTTGCAAACTTATTTTGCTGCGA TAGAAAGACTTGGCAGAAAGAATAAGGGTAGGGCTATGATCGGAGACACAAAAGGATTTAAGGTCTTTCGCAAGCATTAT AAAAAATACCATACCCCTCAAGAAGGTAAACGAGGAGTTTTTTATTTACATCCGAATGCGGAGGGAGCGAGGGTATTAGG TCGGTTATGGAGTGAAGGTATTAAACAATAA
Upstream 100 bases:
>100_bases CTGAGGTGTATGAATCGTCTCGTTATTCTTTAGATTATTATAAGAAGATTCCCTTTCCGTATGATTGGAATAAAACACAA ATGTTTAAGTAATGATAAGT
Downstream 100 bases:
>100_bases TTTTATTTATTAAATTAAAAAAAATATGAGAAAGGTTGTATTGCAAATTATCTGTTGCTTGTTGGCATTAAATGTGCAGG CTCAAAAAAATATTGAGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: Xylanase; Lipolytic Protein G-D-S-L Family; GDSL-Like Protein; Acetylesterase/GDSL-Like Lipase/Acylhydrolase; Esterase; GDSL-Like Lipase/Acylhydrolase; O-Antigen-Like Protein
Number of amino acids: Translated: 436; Mature: 436
Protein sequence:
>436_residues MYRVLIISVVIGWAINIKAQIKVACVGNSITENIALSNEQKYPSILQDLLGNGYIVRNYGIGARTVLKKGDYPYWNEERY KEVLAWNPDIVIVKMGTNDAKAQNWAYKDNFESDYIEFILSFQTLPSHPKVFICYPIPTFKDNFLPVEDQLLVKEMMPMI DNISKATCADIIDLHTPLVGKDDCVYDKVHPNEKGTKIMARVIARKICPHRKFPFPPEKKINVVFVGNSITEATYLKITP PEWTTIYLDSLGYDVQSVNCGKSGYTTFDFLPGKGGFKYVIRKADELYKKDKRNLVFSFCLGVNDSACTGTNGAPVSAEQ YESNMQLIIDSLCFRFPEAKVVLHYPIWYSPNTYNSAMYLKEGLKRLQTYFAAIERLGRKNKGRAMIGDTKGFKVFRKHY KKYHTPQEGKRGVFYLHPNAEGARVLGRLWSEGIKQ
Sequences:
>Translated_436_residues MYRVLIISVVIGWAINIKAQIKVACVGNSITENIALSNEQKYPSILQDLLGNGYIVRNYGIGARTVLKKGDYPYWNEERY KEVLAWNPDIVIVKMGTNDAKAQNWAYKDNFESDYIEFILSFQTLPSHPKVFICYPIPTFKDNFLPVEDQLLVKEMMPMI DNISKATCADIIDLHTPLVGKDDCVYDKVHPNEKGTKIMARVIARKICPHRKFPFPPEKKINVVFVGNSITEATYLKITP PEWTTIYLDSLGYDVQSVNCGKSGYTTFDFLPGKGGFKYVIRKADELYKKDKRNLVFSFCLGVNDSACTGTNGAPVSAEQ YESNMQLIIDSLCFRFPEAKVVLHYPIWYSPNTYNSAMYLKEGLKRLQTYFAAIERLGRKNKGRAMIGDTKGFKVFRKHY KKYHTPQEGKRGVFYLHPNAEGARVLGRLWSEGIKQ >Mature_436_residues MYRVLIISVVIGWAINIKAQIKVACVGNSITENIALSNEQKYPSILQDLLGNGYIVRNYGIGARTVLKKGDYPYWNEERY KEVLAWNPDIVIVKMGTNDAKAQNWAYKDNFESDYIEFILSFQTLPSHPKVFICYPIPTFKDNFLPVEDQLLVKEMMPMI DNISKATCADIIDLHTPLVGKDDCVYDKVHPNEKGTKIMARVIARKICPHRKFPFPPEKKINVVFVGNSITEATYLKITP PEWTTIYLDSLGYDVQSVNCGKSGYTTFDFLPGKGGFKYVIRKADELYKKDKRNLVFSFCLGVNDSACTGTNGAPVSAEQ YESNMQLIIDSLCFRFPEAKVVLHYPIWYSPNTYNSAMYLKEGLKRLQTYFAAIERLGRKNKGRAMIGDTKGFKVFRKHY KKYHTPQEGKRGVFYLHPNAEGARVLGRLWSEGIKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49769; Mature: 49769
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: PS00123 ALKALINE_PHOSPHATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRVLIISVVIGWAINIKAQIKVACVGNSITENIALSNEQKYPSILQDLLGNGYIVRNYG CEEEEEEEEHHHHEEEEEEEEEEEEECCCHHCCCCCCCCCCCHHHHHHHHCCCEEEEECC IGARTVLKKGDYPYWNEERYKEVLAWNPDIVIVKMGTNDAKAQNWAYKDNFESDYIEFIL CCHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHH SFQTLPSHPKVFICYPIPTFKDNFLPVEDQLLVKEMMPMIDNISKATCADIIDLHTPLVG HHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC KDDCVYDKVHPNEKGTKIMARVIARKICPHRKFPFPPEKKINVVFVGNSITEATYLKITP CCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECC PEWTTIYLDSLGYDVQSVNCGKSGYTTFDFLPGKGGFKYVIRKADELYKKDKRNLVFSFC CCCEEEEEECCCCCEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEE LGVNDSACTGTNGAPVSAEQYESNMQLIIDSLCFRFPEAKVVLHYPIWYSPNTYNSAMYL ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCHHHHH KEGLKRLQTYFAAIERLGRKNKGRAMIGDTKGFKVFRKHYKKYHTPQEGKRGVFYLHPNA HHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCC EGARVLGRLWSEGIKQ CHHHHHHHHHHHHCCC >Mature Secondary Structure MYRVLIISVVIGWAINIKAQIKVACVGNSITENIALSNEQKYPSILQDLLGNGYIVRNYG CEEEEEEEEHHHHEEEEEEEEEEEEECCCHHCCCCCCCCCCCHHHHHHHHCCCEEEEECC IGARTVLKKGDYPYWNEERYKEVLAWNPDIVIVKMGTNDAKAQNWAYKDNFESDYIEFIL CCHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHH SFQTLPSHPKVFICYPIPTFKDNFLPVEDQLLVKEMMPMIDNISKATCADIIDLHTPLVG HHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC KDDCVYDKVHPNEKGTKIMARVIARKICPHRKFPFPPEKKINVVFVGNSITEATYLKITP CCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECC PEWTTIYLDSLGYDVQSVNCGKSGYTTFDFLPGKGGFKYVIRKADELYKKDKRNLVFSFC CCCEEEEEECCCCCEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEE LGVNDSACTGTNGAPVSAEQYESNMQLIIDSLCFRFPEAKVVLHYPIWYSPNTYNSAMYL ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCHHHHH KEGLKRLQTYFAAIERLGRKNKGRAMIGDTKGFKVFRKHYKKYHTPQEGKRGVFYLHPNA HHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCC EGARVLGRLWSEGIKQ CHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA