Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

Click here to switch to the map view.

The map label for this gene is 29347963

Identifier: 29347963

GI number: 29347963

Start: 3186074

End: 3187825

Strand: Reverse

Name: 29347963

Synonym: BT_2553

Alternate gene names: NA

Gene position: 3187825-3186074 (Counterclockwise)

Preceding gene: 29347964

Following gene: 29347960

Centisome position: 50.92

GC content: 40.07

Gene sequence:

>1752_bases
ATGATGAAACAAATACCCTATGGATTGACGGACTTTGCCCGAATTCAAAAGGACAATTATTACTATGTAGATAAGACCAT
GTTCATCGAGAGAATCGAGATGCAACCGGCTTATCTTTTCCTGATTCGTCCTCGTCGGTTTGGAAAGAGTTTGACTTTGG
CTATGTTGGAGGCTTATTACGATGTAGTATATGCTAATGACTTTGATGAGCTATTCGGGCATCTTTATATAGGTCAACAT
CCAACCCCGAAGCATAATTGTTATCTCATTATGCGGTTCAACTTTTCGGAAGTAAGTTCTAATGTCAATGAAGTAGAGCG
ATCATTTAAATTGCATTGCTGTAGTAAGCTTAGGGATTTTGTGTTCAAATATGAAGATCTTTTGGGAAAAGAAATTTGGG
ATGTTCTCGATGAAGAGATACAGCAAGATCCGGGTGCTTTTTTATCAGCTATCAATTCTTATGCTTCCCGTAAAGGAAAT
CTACCTATTTATCTCCTTATTGATGAATATGATAATTTTACGAATACGATTCTTTCGACCTATGGTACAGAGTATTATCA
AAAGGCGACTCATGGTGAAGGCTTTGTTCGTGGATTCTTTAATGTGATAAAGGCTGCTACCACCGGTACGGGGTCCGCTC
TTCAGCGTATGTTTATCACAGGAGTGAGTCCTGTCACGATGGATGACGTCACCAGTGGCTTTAATATCGGAACCAATATT
ACGACTGATCCTTGGTTTAATGATTTAGTAGGTTTCAGTGAAGCGGAACTGCGTGAAATGCTTACTTATTATAAAGAACA
GGGAGTGCTCATGCAAACGGTAGATGAGACAATTGTCATGATGAAACCCAACTATGACAATTACTGCTTTAGTAGAAGTA
GATTAGCAGATTGTATGTTTAACTCCGATATGGTGCTTTACTTTATGAAATCTTTTGTATTGCATGGAGAAAAGCCTGAT
GAAATTGTAGACCCCAACATTCGTACTGACTTTAATAAATTAGCTTACTTGATTCGTCTTGACCACGGATTGGGGGAGAA
CTTCTCTGTTATTAAAGAAATAGCCGAGCAGGGAGAAATAACTACGGACATTGCTACACACTTTTCCGCATTGGAAATGA
CGGATGTACGCAATTTCAAGTCTTTGTTATTCTATTTCGGACTTCTTTCTATTAAAGGAGTCGATATGGTGGGAAGACCC
ATTCTGCATGTCCCGAATCTGGTGGTCAGAGAACAGCTTTTTAGCTTTTTGATCCAAGGATATATCAAACATGATATTTT
TAAGATTGATATGAACCGGATGACGATGTTATTTGAGAACATGGCTTTCAGAGGAGACTGGAAACCGTTGTTTAATTTTA
TAGCAGAGGCTATCCGTGAGCAAAGCCGTATTCGCGAATATATAGAGGGCGAAGCACATATTAAGGGCTTTTTGTTGGCT
TATTTAGGTATGTACCGTTATTATCAACTGTATCCGGAATACGAACTGAATAAAGGTTTTGCCGACTTCCTTTTCAAACC
TAGTCCGTCGGTTCCTGTAATGCCGCCATTAACTTATCTGCTCGAAGTGAAGTATGCAAAGGCTGGCGCTTCGGAGAAAG
AAATAAGGGCACTTGCCGATGGGGCGCGGGAGCAGTTACTTCGTTACAGCCAGGATGAATTGGTAACGGAGGCTAGAGCG
AAAGGCGGACTAAAACTAATTACGATAGTATGGTGTAGTTGGGAACTTGTGCTACTGGAAGAAGTACTTTAG

Upstream 100 bases:

>100_bases
AAGAGAAGGATGAAAAGTACGCAGCACTGGAACGTCGTTTGCAAAATATAGAGCAGAGCTTGCAGAAATAAAGAACAAAT
ATAATGAAAGGAATCGTGAT

Downstream 100 bases:

>100_bases
ATTCCTACTGCCTTTATCCCCTTCGAGTAGTTCCAGCATTAGTTTCAAGCGAATGAAACTTTCAGTGAGAGCAAACGTTT
GCTCTCACTCTGCTACCACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 583; Mature: 583

Protein sequence:

>583_residues
MMKQIPYGLTDFARIQKDNYYYVDKTMFIERIEMQPAYLFLIRPRRFGKSLTLAMLEAYYDVVYANDFDELFGHLYIGQH
PTPKHNCYLIMRFNFSEVSSNVNEVERSFKLHCCSKLRDFVFKYEDLLGKEIWDVLDEEIQQDPGAFLSAINSYASRKGN
LPIYLLIDEYDNFTNTILSTYGTEYYQKATHGEGFVRGFFNVIKAATTGTGSALQRMFITGVSPVTMDDVTSGFNIGTNI
TTDPWFNDLVGFSEAELREMLTYYKEQGVLMQTVDETIVMMKPNYDNYCFSRSRLADCMFNSDMVLYFMKSFVLHGEKPD
EIVDPNIRTDFNKLAYLIRLDHGLGENFSVIKEIAEQGEITTDIATHFSALEMTDVRNFKSLLFYFGLLSIKGVDMVGRP
ILHVPNLVVREQLFSFLIQGYIKHDIFKIDMNRMTMLFENMAFRGDWKPLFNFIAEAIREQSRIREYIEGEAHIKGFLLA
YLGMYRYYQLYPEYELNKGFADFLFKPSPSVPVMPPLTYLLEVKYAKAGASEKEIRALADGAREQLLRYSQDELVTEARA
KGGLKLITIVWCSWELVLLEEVL

Sequences:

>Translated_583_residues
MMKQIPYGLTDFARIQKDNYYYVDKTMFIERIEMQPAYLFLIRPRRFGKSLTLAMLEAYYDVVYANDFDELFGHLYIGQH
PTPKHNCYLIMRFNFSEVSSNVNEVERSFKLHCCSKLRDFVFKYEDLLGKEIWDVLDEEIQQDPGAFLSAINSYASRKGN
LPIYLLIDEYDNFTNTILSTYGTEYYQKATHGEGFVRGFFNVIKAATTGTGSALQRMFITGVSPVTMDDVTSGFNIGTNI
TTDPWFNDLVGFSEAELREMLTYYKEQGVLMQTVDETIVMMKPNYDNYCFSRSRLADCMFNSDMVLYFMKSFVLHGEKPD
EIVDPNIRTDFNKLAYLIRLDHGLGENFSVIKEIAEQGEITTDIATHFSALEMTDVRNFKSLLFYFGLLSIKGVDMVGRP
ILHVPNLVVREQLFSFLIQGYIKHDIFKIDMNRMTMLFENMAFRGDWKPLFNFIAEAIREQSRIREYIEGEAHIKGFLLA
YLGMYRYYQLYPEYELNKGFADFLFKPSPSVPVMPPLTYLLEVKYAKAGASEKEIRALADGAREQLLRYSQDELVTEARA
KGGLKLITIVWCSWELVLLEEVL
>Mature_583_residues
MMKQIPYGLTDFARIQKDNYYYVDKTMFIERIEMQPAYLFLIRPRRFGKSLTLAMLEAYYDVVYANDFDELFGHLYIGQH
PTPKHNCYLIMRFNFSEVSSNVNEVERSFKLHCCSKLRDFVFKYEDLLGKEIWDVLDEEIQQDPGAFLSAINSYASRKGN
LPIYLLIDEYDNFTNTILSTYGTEYYQKATHGEGFVRGFFNVIKAATTGTGSALQRMFITGVSPVTMDDVTSGFNIGTNI
TTDPWFNDLVGFSEAELREMLTYYKEQGVLMQTVDETIVMMKPNYDNYCFSRSRLADCMFNSDMVLYFMKSFVLHGEKPD
EIVDPNIRTDFNKLAYLIRLDHGLGENFSVIKEIAEQGEITTDIATHFSALEMTDVRNFKSLLFYFGLLSIKGVDMVGRP
ILHVPNLVVREQLFSFLIQGYIKHDIFKIDMNRMTMLFENMAFRGDWKPLFNFIAEAIREQSRIREYIEGEAHIKGFLLA
YLGMYRYYQLYPEYELNKGFADFLFKPSPSVPVMPPLTYLLEVKYAKAGASEKEIRALADGAREQLLRYSQDELVTEARA
KGGLKLITIVWCSWELVLLEEVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67638; Mature: 67638

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKQIPYGLTDFARIQKDNYYYVDKTMFIERIEMQPAYLFLIRPRRFGKSLTLAMLEAYY
CCCCCCCCCHHHHHHCCCCEEEEEHHHHHHHHHCCCEEEEEECCHHHCCHHHHHHHHHHH
DVVYANDFDELFGHLYIGQHPTPKHNCYLIMRFNFSEVSSNVNEVERSFKLHCCSKLRDF
HHHCCCCHHHHHHEEEECCCCCCCCCEEEEEEECHHHHHCCHHHHHHHHHHHHHHHHHHH
VFKYEDLLGKEIWDVLDEEIQQDPGAFLSAINSYASRKGNLPIYLLIDEYDNFTNTILST
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHH
YGTEYYQKATHGEGFVRGFFNVIKAATTGTGSALQRMFITGVSPVTMDDVTSGFNIGTNI
HCHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCCC
TTDPWFNDLVGFSEAELREMLTYYKEQGVLMQTVDETIVMMKPNYDNYCFSRSRLADCMF
CCCCCHHHHCCCCHHHHHHHHHHHHHCCCCEEECCCEEEEECCCCCCHHHHHHHHHHHHC
NSDMVLYFMKSFVLHGEKPDEIVDPNIRTDFNKLAYLIRLDHGLGENFSVIKEIAEQGEI
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHEEECCCCCCCHHHHHHHHHCCCC
TTDIATHFSALEMTDVRNFKSLLFYFGLLSIKGVDMVGRPILHVPNLVVREQLFSFLIQG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHCCHHHHHHHHHHHHHHH
YIKHDIFKIDMNRMTMLFENMAFRGDWKPLFNFIAEAIREQSRIREYIEGEAHIKGFLLA
HHHHHHEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
YLGMYRYYQLYPEYELNKGFADFLFKPSPSVPVMPPLTYLLEVKYAKAGASEKEIRALAD
HHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH
GAREQLLRYSQDELVTEARAKGGLKLITIVWCSWELVLLEEVL
HHHHHHHHCCHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHCC
>Mature Secondary Structure
MMKQIPYGLTDFARIQKDNYYYVDKTMFIERIEMQPAYLFLIRPRRFGKSLTLAMLEAYY
CCCCCCCCCHHHHHHCCCCEEEEEHHHHHHHHHCCCEEEEEECCHHHCCHHHHHHHHHHH
DVVYANDFDELFGHLYIGQHPTPKHNCYLIMRFNFSEVSSNVNEVERSFKLHCCSKLRDF
HHHCCCCHHHHHHEEEECCCCCCCCCEEEEEEECHHHHHCCHHHHHHHHHHHHHHHHHHH
VFKYEDLLGKEIWDVLDEEIQQDPGAFLSAINSYASRKGNLPIYLLIDEYDNFTNTILST
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHH
YGTEYYQKATHGEGFVRGFFNVIKAATTGTGSALQRMFITGVSPVTMDDVTSGFNIGTNI
HCHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCCC
TTDPWFNDLVGFSEAELREMLTYYKEQGVLMQTVDETIVMMKPNYDNYCFSRSRLADCMF
CCCCCHHHHCCCCHHHHHHHHHHHHHCCCCEEECCCEEEEECCCCCCHHHHHHHHHHHHC
NSDMVLYFMKSFVLHGEKPDEIVDPNIRTDFNKLAYLIRLDHGLGENFSVIKEIAEQGEI
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHEEECCCCCCCHHHHHHHHHCCCC
TTDIATHFSALEMTDVRNFKSLLFYFGLLSIKGVDMVGRPILHVPNLVVREQLFSFLIQG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHCCHHHHHHHHHHHHHHH
YIKHDIFKIDMNRMTMLFENMAFRGDWKPLFNFIAEAIREQSRIREYIEGEAHIKGFLLA
HHHHHHEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
YLGMYRYYQLYPEYELNKGFADFLFKPSPSVPVMPPLTYLLEVKYAKAGASEKEIRALAD
HHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH
GAREQLLRYSQDELVTEARAKGGLKLITIVWCSWELVLLEEVL
HHHHHHHHCCHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA