| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347963
Identifier: 29347963
GI number: 29347963
Start: 3186074
End: 3187825
Strand: Reverse
Name: 29347963
Synonym: BT_2553
Alternate gene names: NA
Gene position: 3187825-3186074 (Counterclockwise)
Preceding gene: 29347964
Following gene: 29347960
Centisome position: 50.92
GC content: 40.07
Gene sequence:
>1752_bases ATGATGAAACAAATACCCTATGGATTGACGGACTTTGCCCGAATTCAAAAGGACAATTATTACTATGTAGATAAGACCAT GTTCATCGAGAGAATCGAGATGCAACCGGCTTATCTTTTCCTGATTCGTCCTCGTCGGTTTGGAAAGAGTTTGACTTTGG CTATGTTGGAGGCTTATTACGATGTAGTATATGCTAATGACTTTGATGAGCTATTCGGGCATCTTTATATAGGTCAACAT CCAACCCCGAAGCATAATTGTTATCTCATTATGCGGTTCAACTTTTCGGAAGTAAGTTCTAATGTCAATGAAGTAGAGCG ATCATTTAAATTGCATTGCTGTAGTAAGCTTAGGGATTTTGTGTTCAAATATGAAGATCTTTTGGGAAAAGAAATTTGGG ATGTTCTCGATGAAGAGATACAGCAAGATCCGGGTGCTTTTTTATCAGCTATCAATTCTTATGCTTCCCGTAAAGGAAAT CTACCTATTTATCTCCTTATTGATGAATATGATAATTTTACGAATACGATTCTTTCGACCTATGGTACAGAGTATTATCA AAAGGCGACTCATGGTGAAGGCTTTGTTCGTGGATTCTTTAATGTGATAAAGGCTGCTACCACCGGTACGGGGTCCGCTC TTCAGCGTATGTTTATCACAGGAGTGAGTCCTGTCACGATGGATGACGTCACCAGTGGCTTTAATATCGGAACCAATATT ACGACTGATCCTTGGTTTAATGATTTAGTAGGTTTCAGTGAAGCGGAACTGCGTGAAATGCTTACTTATTATAAAGAACA GGGAGTGCTCATGCAAACGGTAGATGAGACAATTGTCATGATGAAACCCAACTATGACAATTACTGCTTTAGTAGAAGTA GATTAGCAGATTGTATGTTTAACTCCGATATGGTGCTTTACTTTATGAAATCTTTTGTATTGCATGGAGAAAAGCCTGAT GAAATTGTAGACCCCAACATTCGTACTGACTTTAATAAATTAGCTTACTTGATTCGTCTTGACCACGGATTGGGGGAGAA CTTCTCTGTTATTAAAGAAATAGCCGAGCAGGGAGAAATAACTACGGACATTGCTACACACTTTTCCGCATTGGAAATGA CGGATGTACGCAATTTCAAGTCTTTGTTATTCTATTTCGGACTTCTTTCTATTAAAGGAGTCGATATGGTGGGAAGACCC ATTCTGCATGTCCCGAATCTGGTGGTCAGAGAACAGCTTTTTAGCTTTTTGATCCAAGGATATATCAAACATGATATTTT TAAGATTGATATGAACCGGATGACGATGTTATTTGAGAACATGGCTTTCAGAGGAGACTGGAAACCGTTGTTTAATTTTA TAGCAGAGGCTATCCGTGAGCAAAGCCGTATTCGCGAATATATAGAGGGCGAAGCACATATTAAGGGCTTTTTGTTGGCT TATTTAGGTATGTACCGTTATTATCAACTGTATCCGGAATACGAACTGAATAAAGGTTTTGCCGACTTCCTTTTCAAACC TAGTCCGTCGGTTCCTGTAATGCCGCCATTAACTTATCTGCTCGAAGTGAAGTATGCAAAGGCTGGCGCTTCGGAGAAAG AAATAAGGGCACTTGCCGATGGGGCGCGGGAGCAGTTACTTCGTTACAGCCAGGATGAATTGGTAACGGAGGCTAGAGCG AAAGGCGGACTAAAACTAATTACGATAGTATGGTGTAGTTGGGAACTTGTGCTACTGGAAGAAGTACTTTAG
Upstream 100 bases:
>100_bases AAGAGAAGGATGAAAAGTACGCAGCACTGGAACGTCGTTTGCAAAATATAGAGCAGAGCTTGCAGAAATAAAGAACAAAT ATAATGAAAGGAATCGTGAT
Downstream 100 bases:
>100_bases ATTCCTACTGCCTTTATCCCCTTCGAGTAGTTCCAGCATTAGTTTCAAGCGAATGAAACTTTCAGTGAGAGCAAACGTTT GCTCTCACTCTGCTACCACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 583; Mature: 583
Protein sequence:
>583_residues MMKQIPYGLTDFARIQKDNYYYVDKTMFIERIEMQPAYLFLIRPRRFGKSLTLAMLEAYYDVVYANDFDELFGHLYIGQH PTPKHNCYLIMRFNFSEVSSNVNEVERSFKLHCCSKLRDFVFKYEDLLGKEIWDVLDEEIQQDPGAFLSAINSYASRKGN LPIYLLIDEYDNFTNTILSTYGTEYYQKATHGEGFVRGFFNVIKAATTGTGSALQRMFITGVSPVTMDDVTSGFNIGTNI TTDPWFNDLVGFSEAELREMLTYYKEQGVLMQTVDETIVMMKPNYDNYCFSRSRLADCMFNSDMVLYFMKSFVLHGEKPD EIVDPNIRTDFNKLAYLIRLDHGLGENFSVIKEIAEQGEITTDIATHFSALEMTDVRNFKSLLFYFGLLSIKGVDMVGRP ILHVPNLVVREQLFSFLIQGYIKHDIFKIDMNRMTMLFENMAFRGDWKPLFNFIAEAIREQSRIREYIEGEAHIKGFLLA YLGMYRYYQLYPEYELNKGFADFLFKPSPSVPVMPPLTYLLEVKYAKAGASEKEIRALADGAREQLLRYSQDELVTEARA KGGLKLITIVWCSWELVLLEEVL
Sequences:
>Translated_583_residues MMKQIPYGLTDFARIQKDNYYYVDKTMFIERIEMQPAYLFLIRPRRFGKSLTLAMLEAYYDVVYANDFDELFGHLYIGQH PTPKHNCYLIMRFNFSEVSSNVNEVERSFKLHCCSKLRDFVFKYEDLLGKEIWDVLDEEIQQDPGAFLSAINSYASRKGN LPIYLLIDEYDNFTNTILSTYGTEYYQKATHGEGFVRGFFNVIKAATTGTGSALQRMFITGVSPVTMDDVTSGFNIGTNI TTDPWFNDLVGFSEAELREMLTYYKEQGVLMQTVDETIVMMKPNYDNYCFSRSRLADCMFNSDMVLYFMKSFVLHGEKPD EIVDPNIRTDFNKLAYLIRLDHGLGENFSVIKEIAEQGEITTDIATHFSALEMTDVRNFKSLLFYFGLLSIKGVDMVGRP ILHVPNLVVREQLFSFLIQGYIKHDIFKIDMNRMTMLFENMAFRGDWKPLFNFIAEAIREQSRIREYIEGEAHIKGFLLA YLGMYRYYQLYPEYELNKGFADFLFKPSPSVPVMPPLTYLLEVKYAKAGASEKEIRALADGAREQLLRYSQDELVTEARA KGGLKLITIVWCSWELVLLEEVL >Mature_583_residues MMKQIPYGLTDFARIQKDNYYYVDKTMFIERIEMQPAYLFLIRPRRFGKSLTLAMLEAYYDVVYANDFDELFGHLYIGQH PTPKHNCYLIMRFNFSEVSSNVNEVERSFKLHCCSKLRDFVFKYEDLLGKEIWDVLDEEIQQDPGAFLSAINSYASRKGN LPIYLLIDEYDNFTNTILSTYGTEYYQKATHGEGFVRGFFNVIKAATTGTGSALQRMFITGVSPVTMDDVTSGFNIGTNI TTDPWFNDLVGFSEAELREMLTYYKEQGVLMQTVDETIVMMKPNYDNYCFSRSRLADCMFNSDMVLYFMKSFVLHGEKPD EIVDPNIRTDFNKLAYLIRLDHGLGENFSVIKEIAEQGEITTDIATHFSALEMTDVRNFKSLLFYFGLLSIKGVDMVGRP ILHVPNLVVREQLFSFLIQGYIKHDIFKIDMNRMTMLFENMAFRGDWKPLFNFIAEAIREQSRIREYIEGEAHIKGFLLA YLGMYRYYQLYPEYELNKGFADFLFKPSPSVPVMPPLTYLLEVKYAKAGASEKEIRALADGAREQLLRYSQDELVTEARA KGGLKLITIVWCSWELVLLEEVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67638; Mature: 67638
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKQIPYGLTDFARIQKDNYYYVDKTMFIERIEMQPAYLFLIRPRRFGKSLTLAMLEAYY CCCCCCCCCHHHHHHCCCCEEEEEHHHHHHHHHCCCEEEEEECCHHHCCHHHHHHHHHHH DVVYANDFDELFGHLYIGQHPTPKHNCYLIMRFNFSEVSSNVNEVERSFKLHCCSKLRDF HHHCCCCHHHHHHEEEECCCCCCCCCEEEEEEECHHHHHCCHHHHHHHHHHHHHHHHHHH VFKYEDLLGKEIWDVLDEEIQQDPGAFLSAINSYASRKGNLPIYLLIDEYDNFTNTILST HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHH YGTEYYQKATHGEGFVRGFFNVIKAATTGTGSALQRMFITGVSPVTMDDVTSGFNIGTNI HCHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCCC TTDPWFNDLVGFSEAELREMLTYYKEQGVLMQTVDETIVMMKPNYDNYCFSRSRLADCMF CCCCCHHHHCCCCHHHHHHHHHHHHHCCCCEEECCCEEEEECCCCCCHHHHHHHHHHHHC NSDMVLYFMKSFVLHGEKPDEIVDPNIRTDFNKLAYLIRLDHGLGENFSVIKEIAEQGEI CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHEEECCCCCCCHHHHHHHHHCCCC TTDIATHFSALEMTDVRNFKSLLFYFGLLSIKGVDMVGRPILHVPNLVVREQLFSFLIQG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHCCHHHHHHHHHHHHHHH YIKHDIFKIDMNRMTMLFENMAFRGDWKPLFNFIAEAIREQSRIREYIEGEAHIKGFLLA HHHHHHEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH YLGMYRYYQLYPEYELNKGFADFLFKPSPSVPVMPPLTYLLEVKYAKAGASEKEIRALAD HHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH GAREQLLRYSQDELVTEARAKGGLKLITIVWCSWELVLLEEVL HHHHHHHHCCHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHCC >Mature Secondary Structure MMKQIPYGLTDFARIQKDNYYYVDKTMFIERIEMQPAYLFLIRPRRFGKSLTLAMLEAYY CCCCCCCCCHHHHHHCCCCEEEEEHHHHHHHHHCCCEEEEEECCHHHCCHHHHHHHHHHH DVVYANDFDELFGHLYIGQHPTPKHNCYLIMRFNFSEVSSNVNEVERSFKLHCCSKLRDF HHHCCCCHHHHHHEEEECCCCCCCCCEEEEEEECHHHHHCCHHHHHHHHHHHHHHHHHHH VFKYEDLLGKEIWDVLDEEIQQDPGAFLSAINSYASRKGNLPIYLLIDEYDNFTNTILST HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHH YGTEYYQKATHGEGFVRGFFNVIKAATTGTGSALQRMFITGVSPVTMDDVTSGFNIGTNI HCHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCCC TTDPWFNDLVGFSEAELREMLTYYKEQGVLMQTVDETIVMMKPNYDNYCFSRSRLADCMF CCCCCHHHHCCCCHHHHHHHHHHHHHCCCCEEECCCEEEEECCCCCCHHHHHHHHHHHHC NSDMVLYFMKSFVLHGEKPDEIVDPNIRTDFNKLAYLIRLDHGLGENFSVIKEIAEQGEI CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHEEECCCCCCCHHHHHHHHHCCCC TTDIATHFSALEMTDVRNFKSLLFYFGLLSIKGVDMVGRPILHVPNLVVREQLFSFLIQG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHCCHHHHHHHHHHHHHHH YIKHDIFKIDMNRMTMLFENMAFRGDWKPLFNFIAEAIREQSRIREYIEGEAHIKGFLLA HHHHHHEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH YLGMYRYYQLYPEYELNKGFADFLFKPSPSVPVMPPLTYLLEVKYAKAGASEKEIRALAD HHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH GAREQLLRYSQDELVTEARAKGGLKLITIVWCSWELVLLEEVL HHHHHHHHCCHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA