| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347936
Identifier: 29347936
GI number: 29347936
Start: 3155836
End: 3156234
Strand: Reverse
Name: 29347936
Synonym: BT_2526
Alternate gene names: NA
Gene position: 3156234-3155836 (Counterclockwise)
Preceding gene: 29347937
Following gene: 29347931
Centisome position: 50.42
GC content: 37.09
Gene sequence:
>399_bases ATGATATTTTATAACAATTTACTAGCAAAATGCTTTCTAGGGAAAAAGAAGCATTATTTTATGATAGGAGGGTTATTCTT TACTCGGTACAAGTATTTGGAAGTTTGGGAAGAAATGGAGTTAAGAATACATGCACGGCAATTCTGGGAGTGTTTTTTAT TGACTTTAATCCCAGCATTGGGTTTATCACTATGGTTCTCATGGTGGTGGATGGTGCTTCCGTTCATGACATATCACTTG CTTTACTGGTTTGAAAAAGCAATTAGTTCTCATTCGGTTTTTAACTGGGAGGCATTGACCTATTGTGGTGATGCCGTTTA TATGAGAAAAAGAAAATCCTATGCCTGGATGAAATGGTATGGGAAGAAAACCTTCCCGAAATCGGAATGGGAAGACTAA
Upstream 100 bases:
>100_bases TTGTATTCCAGGGAAAGGAAATAACTGTAAGATTAGGCTTAAATAATGAACATTTGTACGTTCTTTCCGTTTATGTTATT ACACAACAAAAAAAGGGTAT
Downstream 100 bases:
>100_bases AAGAATAGAGAGACGCTAAAACTCTCTTGCGAATTTATTCAGGCACGGTTTACACAGATTAATATGGTTTCGATTAAAAC AGAACCGTAAAAACTCTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MIFYNNLLAKCFLGKKKHYFMIGGLFFTRYKYLEVWEEMELRIHARQFWECFLLTLIPALGLSLWFSWWWMVLPFMTYHL LYWFEKAISSHSVFNWEALTYCGDAVYMRKRKSYAWMKWYGKKTFPKSEWED
Sequences:
>Translated_132_residues MIFYNNLLAKCFLGKKKHYFMIGGLFFTRYKYLEVWEEMELRIHARQFWECFLLTLIPALGLSLWFSWWWMVLPFMTYHL LYWFEKAISSHSVFNWEALTYCGDAVYMRKRKSYAWMKWYGKKTFPKSEWED >Mature_132_residues MIFYNNLLAKCFLGKKKHYFMIGGLFFTRYKYLEVWEEMELRIHARQFWECFLLTLIPALGLSLWFSWWWMVLPFMTYHL LYWFEKAISSHSVFNWEALTYCGDAVYMRKRKSYAWMKWYGKKTFPKSEWED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16442; Mature: 16442
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFYNNLLAKCFLGKKKHYFMIGGLFFTRYKYLEVWEEMELRIHARQFWECFLLTLIPAL CEEHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLSLWFSWWWMVLPFMTYHLLYWFEKAISSHSVFNWEALTYCGDAVYMRKRKSYAWMKWY HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHH GKKTFPKSEWED CCCCCCCCCCCC >Mature Secondary Structure MIFYNNLLAKCFLGKKKHYFMIGGLFFTRYKYLEVWEEMELRIHARQFWECFLLTLIPAL CEEHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLSLWFSWWWMVLPFMTYHLLYWFEKAISSHSVFNWEALTYCGDAVYMRKRKSYAWMKWY HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHH GKKTFPKSEWED CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA