Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347832

Identifier: 29347832

GI number: 29347832

Start: 3025126

End: 3025872

Strand: Reverse

Name: 29347832

Synonym: BT_2422

Alternate gene names: NA

Gene position: 3025872-3025126 (Counterclockwise)

Preceding gene: 29347833

Following gene: 29347831

Centisome position: 48.33

GC content: 43.91

Gene sequence:

>747_bases
ATGAAGAGTTTTTTTAGTAAGAAGATTGTTGTAGGAGCATTGGTTGCGGCAACTGTATGCGTATCGGGTATAACGGATGC
AAAAGCACAGGAATTTGCTGTGCAGGGAGATATTGTCAGTTCCTATGTCTGGCGGGGAATGTACCAGGGTGGAGGTGCGG
CTTTTCAACCCACGCTGGGGTTTGGGTTCGATAATTTTTCTGTTACCGCATGGGGATCTACTAATTTCAGTGGAGGGAAT
AAAGAACTGGATCTGACTCTTGCCTATAAGTTTGGTAAGGCGGGACCTACGCTGACGGTTGCCGATTTGTGGTGGGAAGG
TGAAGGGGCATATAAATATTTTAATTTTAAGAGCCACGAGACGGGACATCATTTTGAGGCGGGATTGGCTTATACGTTGC
CCGTAGAGAAGTTTCCCCTGTCCGTAGCGTGGTATACGATGTTTGCCGGAAAAGACAAGAAGCTGAATGATAGCGGAGAA
CTGAAGCAGAATTATTCCTCCTATCTGGAACTGAACTATCCTTTCAGTGTGAAAAATGTCGATTTAAATGTAACTTGCGG
CGCAGTGCCGTATAAGGCGGAGGGTATCTACACGAATAGTGGCTTCGCCGTGACTAATGTAGCTTTAAAAGGAATGACAG
AGATAAAAATTAATGATAAGTTTTCATTGCCGATATTTGCACAGGCTATATGGAATCCATGTGTTGAAGATGCTTTTTTG
GTTTTTGGCGTAACTTTAAGACCATAG

Upstream 100 bases:

>100_bases
CGTGCCTGTCCGAATCGTTTTAGTTATTTATTGCGGTTCAAATAAACAGGGCTGGACAGGGCGCTGCTCTTTTTTAGAAA
CATAAAATAAAAAGATAAAT

Downstream 100 bases:

>100_bases
ATATAAACTCATGAATTTTTATTATGCAGAAACCCGTGGTGATCGTGATGATTACTACGGGTTGAAATAGTTTATAAACA
GCAATTAATGAAATGGATAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MKSFFSKKIVVGALVAATVCVSGITDAKAQEFAVQGDIVSSYVWRGMYQGGGAAFQPTLGFGFDNFSVTAWGSTNFSGGN
KELDLTLAYKFGKAGPTLTVADLWWEGEGAYKYFNFKSHETGHHFEAGLAYTLPVEKFPLSVAWYTMFAGKDKKLNDSGE
LKQNYSSYLELNYPFSVKNVDLNVTCGAVPYKAEGIYTNSGFAVTNVALKGMTEIKINDKFSLPIFAQAIWNPCVEDAFL
VFGVTLRP

Sequences:

>Translated_248_residues
MKSFFSKKIVVGALVAATVCVSGITDAKAQEFAVQGDIVSSYVWRGMYQGGGAAFQPTLGFGFDNFSVTAWGSTNFSGGN
KELDLTLAYKFGKAGPTLTVADLWWEGEGAYKYFNFKSHETGHHFEAGLAYTLPVEKFPLSVAWYTMFAGKDKKLNDSGE
LKQNYSSYLELNYPFSVKNVDLNVTCGAVPYKAEGIYTNSGFAVTNVALKGMTEIKINDKFSLPIFAQAIWNPCVEDAFL
VFGVTLRP
>Mature_248_residues
MKSFFSKKIVVGALVAATVCVSGITDAKAQEFAVQGDIVSSYVWRGMYQGGGAAFQPTLGFGFDNFSVTAWGSTNFSGGN
KELDLTLAYKFGKAGPTLTVADLWWEGEGAYKYFNFKSHETGHHFEAGLAYTLPVEKFPLSVAWYTMFAGKDKKLNDSGE
LKQNYSSYLELNYPFSVKNVDLNVTCGAVPYKAEGIYTNSGFAVTNVALKGMTEIKINDKFSLPIFAQAIWNPCVEDAFL
VFGVTLRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27137; Mature: 27137

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSFFSKKIVVGALVAATVCVSGITDAKAQEFAVQGDIVSSYVWRGMYQGGGAAFQPTLG
CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEECCCHHHHHHHHHHCCCCCEEECCCCC
FGFDNFSVTAWGSTNFSGGNKELDLTLAYKFGKAGPTLTVADLWWEGEGAYKYFNFKSHE
CCCCCCEEEEECCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEEECCCCCEEEEEECCCC
TGHHFEAGLAYTLPVEKFPLSVAWYTMFAGKDKKLNDSGELKQNYSSYLELNYPFSVKNV
CCCCEECCEEEEECHHHCCCEEEEEEEECCCCCCCCCCCCHHHCCCCEEEEECCEEEEEE
DLNVTCGAVPYKAEGIYTNSGFAVTNVALKGMTEIKINDKFSLPIFAQAIWNPCVEDAFL
EEEEEECCCCEECCEEEECCCEEEEEEEECCEEEEEECCCCCCCCHHHHHHCHHHHCEEE
VFGVTLRP
EEEEEECC
>Mature Secondary Structure
MKSFFSKKIVVGALVAATVCVSGITDAKAQEFAVQGDIVSSYVWRGMYQGGGAAFQPTLG
CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEECCCHHHHHHHHHHCCCCCEEECCCCC
FGFDNFSVTAWGSTNFSGGNKELDLTLAYKFGKAGPTLTVADLWWEGEGAYKYFNFKSHE
CCCCCCEEEEECCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEEECCCCCEEEEEECCCC
TGHHFEAGLAYTLPVEKFPLSVAWYTMFAGKDKKLNDSGELKQNYSSYLELNYPFSVKNV
CCCCEECCEEEEECHHHCCCEEEEEEEECCCCCCCCCCCCHHHCCCCEEEEECCEEEEEE
DLNVTCGAVPYKAEGIYTNSGFAVTNVALKGMTEIKINDKFSLPIFAQAIWNPCVEDAFL
EEEEEECCCCEECCEEEECCCEEEEEEEECCEEEEEECCCCCCCCHHHHHHCHHHHCEEE
VFGVTLRP
EEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA