Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347779

Identifier: 29347779

GI number: 29347779

Start: 2955211

End: 2955840

Strand: Reverse

Name: 29347779

Synonym: BT_2369

Alternate gene names: NA

Gene position: 2955840-2955211 (Counterclockwise)

Preceding gene: 29347781

Following gene: 29347778

Centisome position: 47.22

GC content: 44.13

Gene sequence:

>630_bases
ATGAGAACAGTATTGGCAGCATTAGGAGTTTTGTGTTTCATGGGAAGTTGTTCGTCAGGTATGACAAGTTCAAAAGGCAT
TGTTTGTGATGCGACCATGAATACAGTGGCGATTGTTACAGACAAGAATGATACTCTTTCATTCAGTACGATGAACGCGA
ATAAAGAAGAAGTCGATGGCTTGCTTCTGAATGATACTCTGGAAGTATTCTATACCGGTAAATATACACCGGGGATGCAG
GCCTCAAAATTAGTCCAGTATCCGCAATCTCTCAAACTTGGAGGCGATCGGGATGAACACGGTTGTATCGGCTCTGCCGG
ATATGTATGGTGTGAAGTGCAGCAAGACTGCATCCGGTTGTTTGAAAAAGGTATCCGGACAGAAGCTGTGGATGGAGGCA
CTGCCTCTGCTTTTATAGTGTTCAGCCCCGATTCCACACGTCTGGAACTTTTCTTCTCTGATGAACAACCGAATGAGATT
CTGGAAAGACGTGGCTTACCTTCGGGAGGTTATGCATGGAACGTGGAGGATGATGATACGAAAAATGTACGGTTTATAGA
CGGATTGTGGACAATCAGTCAGAGAGATAAGGTTATTTATCGTGAGAAAAAGACGAAAGCCGGAGAATAA

Upstream 100 bases:

>100_bases
AAAGCAAACTTGTTTGTTATTCTGCTTGTTAGGATAACATCTTTTCCATATATCCTTTATATTTGCATGATATTAGAACC
AACAATTATATAAAAAAGAT

Downstream 100 bases:

>100_bases
TTCCGGCTTTTATAGCTGTTTATTTATTACTTTTATCAGATAAAAGTATAGCCGAATCGTGCTCAACAATGTCTTTTTAC
GACTGTAGTGCTAAAAAATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MRTVLAALGVLCFMGSCSSGMTSSKGIVCDATMNTVAIVTDKNDTLSFSTMNANKEEVDGLLLNDTLEVFYTGKYTPGMQ
ASKLVQYPQSLKLGGDRDEHGCIGSAGYVWCEVQQDCIRLFEKGIRTEAVDGGTASAFIVFSPDSTRLELFFSDEQPNEI
LERRGLPSGGYAWNVEDDDTKNVRFIDGLWTISQRDKVIYREKKTKAGE

Sequences:

>Translated_209_residues
MRTVLAALGVLCFMGSCSSGMTSSKGIVCDATMNTVAIVTDKNDTLSFSTMNANKEEVDGLLLNDTLEVFYTGKYTPGMQ
ASKLVQYPQSLKLGGDRDEHGCIGSAGYVWCEVQQDCIRLFEKGIRTEAVDGGTASAFIVFSPDSTRLELFFSDEQPNEI
LERRGLPSGGYAWNVEDDDTKNVRFIDGLWTISQRDKVIYREKKTKAGE
>Mature_209_residues
MRTVLAALGVLCFMGSCSSGMTSSKGIVCDATMNTVAIVTDKNDTLSFSTMNANKEEVDGLLLNDTLEVFYTGKYTPGMQ
ASKLVQYPQSLKLGGDRDEHGCIGSAGYVWCEVQQDCIRLFEKGIRTEAVDGGTASAFIVFSPDSTRLELFFSDEQPNEI
LERRGLPSGGYAWNVEDDDTKNVRFIDGLWTISQRDKVIYREKKTKAGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23015; Mature: 23015

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTVLAALGVLCFMGSCSSGMTSSKGIVCDATMNTVAIVTDKNDTLSFSTMNANKEEVDG
CHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCEEEEEECCCCEEEEEECCCCHHHHCC
LLLNDTLEVFYTGKYTPGMQASKLVQYPQSLKLGGDRDEHGCIGSAGYVWCEVQQDCIRL
EEEECEEEEEEECCCCCCCCHHHHHHCCHHCCCCCCCCCCCCCCCCCEEEEEEHHHHHHH
FEKGIRTEAVDGGTASAFIVFSPDSTRLELFFSDEQPNEILERRGLPSGGYAWNVEDDDT
HHHCCCEECCCCCCCEEEEEECCCCCEEEEEECCCCHHHHHHHCCCCCCCEEEECCCCCC
KNVRFIDGLWTISQRDKVIYREKKTKAGE
CCEEEEEEEEEECCCCCEEEEECCCCCCC
>Mature Secondary Structure
MRTVLAALGVLCFMGSCSSGMTSSKGIVCDATMNTVAIVTDKNDTLSFSTMNANKEEVDG
CHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCEEEEEECCCCEEEEEECCCCHHHHCC
LLLNDTLEVFYTGKYTPGMQASKLVQYPQSLKLGGDRDEHGCIGSAGYVWCEVQQDCIRL
EEEECEEEEEEECCCCCCCCHHHHHHCCHHCCCCCCCCCCCCCCCCCEEEEEEHHHHHHH
FEKGIRTEAVDGGTASAFIVFSPDSTRLELFFSDEQPNEILERRGLPSGGYAWNVEDDDT
HHHCCCEECCCCCCCEEEEEECCCCCEEEEEECCCCHHHHHHHCCCCCCCEEEECCCCCC
KNVRFIDGLWTISQRDKVIYREKKTKAGE
CCEEEEEEEEEECCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA