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The map label for this gene is ybdN [H]

Identifier: 29347721

GI number: 29347721

Start: 2885216

End: 2886490

Strand: Reverse

Name: ybdN [H]

Synonym: BT_2311

Alternate gene names: 29347721

Gene position: 2886490-2885216 (Counterclockwise)

Preceding gene: 29347722

Following gene: 29347720

Centisome position: 46.11

GC content: 49.88

Gene sequence:

>1275_bases
ATGGGAGGAACTCGGATGAATGTATATCAGGCGTTGCGGGAGAGGATCAGAAGAATCTTCGGCGAGTATGATTATGTGTA
CCTTTCTTTTTCGGGGGGTAAGGACAGCGGTGTGCTGCTGAATGCCTGTGTGGAGCATATCAGGCAATATGGAGGTCGGA
TGGGAGTATTCCATATGGATTACGAAGTGCAGTATTCCCTGACCACGGAGTATGTGGATGAGATGCTGTCTTCGAACCGG
GATATTCTGGATGTTTACCGCTGTTGCGTGCCTTTCAAGGTCGGTTCGGCTGCATCCATGTACCAGAGATTCTGGCGGCC
CTGGGACCCTTGTGTCCGTTGGGTCAGGGAGATGCCTGTGGAATACCTGGGTACGGAAGCATTTGATTTTTATACTCCGC
AGATGTGGGATTACGAGTTCCAGGAATGTTTTTCCTTTTGGCTCCGCAAGCAACTTGGAGTGCAAAAAGTGGCATGTCTG
GTTGGAATACGTACCCAGGAAAGCTTTAACCGTTGGAGAACGATCTATCGTAGCACTCCGGGCCCTTCAGCCGACTGGAT
ATGTCCTGTCGATGAGGGCATAGACAACGTGTATCCGTTGTATGACTGGCATACTACGGATATATGGACTGCCAATGGCC
GTTTCCGTTGGAAATACAACAGGTTGTATGACCTCTATTATCAGGCGGGTGTTCCTCTGAACAGCCAGCGTGTTGCGAGC
CCGTTCATTTCCCAGGCCATCCCGTCGCTGCATCTGTACAGGGTGATCGAGCCGGAGATGTGGGGCAAGATGCTGGGACG
TGTGAACGGTGTTAATTTTGCCGGGGGGTACGGTAACTCTGTAGCGATGGGATGGCGGGGTGTCAGGCTGCCTGAGGGAA
TGACCTGGAAAAAATATCTTTTTTTCCTTCTGGACACCCTTCCTGAGGATGCCAGGAACAACTATCTGGATAAACTGGAG
GTAAGCGTGCGGTTCTGGCGGGAGAAGGGCGGCTGTCTGGCAAAAGAAACTATCATGAAACTCAAGAGGTTGAATATCCC
TTTCGAACTTGGCGGGACATCGGGATACAGGATGCACAAGCTCCCGGTCAGGATGGAATACCTTGATGACATAGACCTGC
CTGAATTCCGTGAATTGCCCTCGTACAAGCGGATGTGCATCTGTATCCTGAAAAACGACCACTGTTGCAAGTACATGGGC
TTTTCACCAAATAAACAGGAACAGGAAAGAAGACGGAAGATGATGGATGAATATAGATCTTATTTTAATGAATGA

Upstream 100 bases:

>100_bases
ATACATGAATTTCATCACGATCCGGGAAACCAAGTTATATGTTATGATGGAATTGGTACGTATGGGTTCCGACAGTGGGA
AACAGGATGGCTGAAAGAGA

Downstream 100 bases:

>100_bases
AAAGATGGACAATGAATTTACCAGTCCCGTGTATGGCGTCAAGGCTGTACCGGTGGAAAGGATCAGGGCGAATTCCTATA
ATCCCAACGTGACGGCCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 423

Protein sequence:

>424_residues
MGGTRMNVYQALRERIRRIFGEYDYVYLSFSGGKDSGVLLNACVEHIRQYGGRMGVFHMDYEVQYSLTTEYVDEMLSSNR
DILDVYRCCVPFKVGSAASMYQRFWRPWDPCVRWVREMPVEYLGTEAFDFYTPQMWDYEFQECFSFWLRKQLGVQKVACL
VGIRTQESFNRWRTIYRSTPGPSADWICPVDEGIDNVYPLYDWHTTDIWTANGRFRWKYNRLYDLYYQAGVPLNSQRVAS
PFISQAIPSLHLYRVIEPEMWGKMLGRVNGVNFAGGYGNSVAMGWRGVRLPEGMTWKKYLFFLLDTLPEDARNNYLDKLE
VSVRFWREKGGCLAKETIMKLKRLNIPFELGGTSGYRMHKLPVRMEYLDDIDLPEFRELPSYKRMCICILKNDHCCKYMG
FSPNKQEQERRRKMMDEYRSYFNE

Sequences:

>Translated_424_residues
MGGTRMNVYQALRERIRRIFGEYDYVYLSFSGGKDSGVLLNACVEHIRQYGGRMGVFHMDYEVQYSLTTEYVDEMLSSNR
DILDVYRCCVPFKVGSAASMYQRFWRPWDPCVRWVREMPVEYLGTEAFDFYTPQMWDYEFQECFSFWLRKQLGVQKVACL
VGIRTQESFNRWRTIYRSTPGPSADWICPVDEGIDNVYPLYDWHTTDIWTANGRFRWKYNRLYDLYYQAGVPLNSQRVAS
PFISQAIPSLHLYRVIEPEMWGKMLGRVNGVNFAGGYGNSVAMGWRGVRLPEGMTWKKYLFFLLDTLPEDARNNYLDKLE
VSVRFWREKGGCLAKETIMKLKRLNIPFELGGTSGYRMHKLPVRMEYLDDIDLPEFRELPSYKRMCICILKNDHCCKYMG
FSPNKQEQERRRKMMDEYRSYFNE
>Mature_423_residues
GGTRMNVYQALRERIRRIFGEYDYVYLSFSGGKDSGVLLNACVEHIRQYGGRMGVFHMDYEVQYSLTTEYVDEMLSSNRD
ILDVYRCCVPFKVGSAASMYQRFWRPWDPCVRWVREMPVEYLGTEAFDFYTPQMWDYEFQECFSFWLRKQLGVQKVACLV
GIRTQESFNRWRTIYRSTPGPSADWICPVDEGIDNVYPLYDWHTTDIWTANGRFRWKYNRLYDLYYQAGVPLNSQRVASP
FISQAIPSLHLYRVIEPEMWGKMLGRVNGVNFAGGYGNSVAMGWRGVRLPEGMTWKKYLFFLLDTLPEDARNNYLDKLEV
SVRFWREKGGCLAKETIMKLKRLNIPFELGGTSGYRMHKLPVRMEYLDDIDLPEFRELPSYKRMCICILKNDHCCKYMGF
SPNKQEQERRRKMMDEYRSYFNE

Specific function: Unknown

COG id: COG3969

COG function: function code R; Predicted phosphoadenosine phosphosulfate sulfotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786818, Length=414, Percent_Identity=31.8840579710145, Blast_Score=214, Evalue=9e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021845
- InterPro:   IPR002500
- InterPro:   IPR014729 [H]

Pfam domain/function: PF11922 DUF3440; PF01507 PAPS_reduct [H]

EC number: NA

Molecular weight: Translated: 50344; Mature: 50213

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGTRMNVYQALRERIRRIFGEYDYVYLSFSGGKDSGVLLNACVEHIRQYGGRMGVFHMD
CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEC
YEVQYSLTTEYVDEMLSSNRDILDVYRCCVPFKVGSAASMYQRFWRPWDPCVRWVREMPV
EEEEEEHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCH
EYLGTEAFDFYTPQMWDYEFQECFSFWLRKQLGVQKVACLVGIRTQESFNRWRTIYRSTP
HHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHCCCC
GPSADWICPVDEGIDNVYPLYDWHTTDIWTANGRFRWKYNRLYDLYYQAGVPLNSQRVAS
CCCCCEEECHHCCCCCCCCCEECCCCEEEECCCEEEEEHHHHHHHHHHCCCCCCHHHHHH
PFISQAIPSLHLYRVIEPEMWGKMLGRVNGVNFAGGYGNSVAMGWRGVRLPEGMTWKKYL
HHHHHHCCCHHHHEECCHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHH
FFLLDTLPEDARNNYLDKLEVSVRFWREKGGCLAKETIMKLKRLNIPFELGGTSGYRMHK
HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCCCEEEE
LPVRMEYLDDIDLPEFRELPSYKRMCICILKNDHCCKYMGFSPNKQEQERRRKMMDEYRS
CCCHHHHHCCCCCCHHHCCCCCCCEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHH
YFNE
HHCC
>Mature Secondary Structure 
GGTRMNVYQALRERIRRIFGEYDYVYLSFSGGKDSGVLLNACVEHIRQYGGRMGVFHMD
CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEC
YEVQYSLTTEYVDEMLSSNRDILDVYRCCVPFKVGSAASMYQRFWRPWDPCVRWVREMPV
EEEEEEHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCH
EYLGTEAFDFYTPQMWDYEFQECFSFWLRKQLGVQKVACLVGIRTQESFNRWRTIYRSTP
HHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHCCCC
GPSADWICPVDEGIDNVYPLYDWHTTDIWTANGRFRWKYNRLYDLYYQAGVPLNSQRVAS
CCCCCEEECHHCCCCCCCCCEECCCCEEEECCCEEEEEHHHHHHHHHHCCCCCCHHHHHH
PFISQAIPSLHLYRVIEPEMWGKMLGRVNGVNFAGGYGNSVAMGWRGVRLPEGMTWKKYL
HHHHHHCCCHHHHEECCHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHH
FFLLDTLPEDARNNYLDKLEVSVRFWREKGGCLAKETIMKLKRLNIPFELGGTSGYRMHK
HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCCCEEEE
LPVRMEYLDDIDLPEFRELPSYKRMCICILKNDHCCKYMGFSPNKQEQERRRKMMDEYRS
CCCHHHHHCCCCCCHHHCCCCCCCEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHH
YFNE
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]