| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29347704
Identifier: 29347704
GI number: 29347704
Start: 2869620
End: 2870249
Strand: Reverse
Name: 29347704
Synonym: BT_2294
Alternate gene names: NA
Gene position: 2870249-2869620 (Counterclockwise)
Preceding gene: 29347705
Following gene: 29347703
Centisome position: 45.85
GC content: 49.52
Gene sequence:
>630_bases ATGAAACGAATAATGGCTGTCTGTCTGGCCGGGCTGCTTTGTCCGACTATGGCGGTAAAGGCGCAATGGGTAACGTTCGA TCCCTCGAACCTTGCACAAAGCATCGTGAATACGACCCGTAACGTGGTGCAGACCACGACGACGGCAGAAAATATGGTGA AGAATTTTCAGGAAACAGTCAAGATCTACGAACAGGGGAAGCGTTATTACGACGCTTTGAAAGCGGTCAACAATCTGGTG AAAGATGCCCGTAAGGTGCAGCAGACCGTTCTCTTGGTCGGTGAAATATCGGACATCTATGTAAATTCTTTCCAGAAAAT GCTGACGGACGGGAACTATACGCCGGACGAGCTTTCGGCAATCGCCTCCGGATATGCGAAGATGCTGGAAGAAAGCAGTG GTATGCTGAACGAGATGAAGATCGTTGTGACCTCCACCGGCCTTTCTATGACGGACAAGGAGCGCATGGACGTGATAGAC CGTGTGTACCGTGACGTGAGAAACCAACGCAATCTGGTCAGGTATTACACGAACCGGAACATCGGTATCTCTTACCTGCG TGCGAAAAAGAAGAATGATACCCAAAGGGTGCTGGACTTGTACGGAACGGACAATCAAAAATACTGGTGA
Upstream 100 bases:
>100_bases ATGTACGTGCGGATGATTCATAAGAAAAAGGAGAACTCCGGTTCTCCTGTAAATGGAAAGAAAACTATCCGATTTATTTA ACGTTAAAATTTTAAAAGAC
Downstream 100 bases:
>100_bases CATGATAGGCGAGGAAACTTTCGGCAACCTTCACGAAGTGTTGCGTAACCTTTATGACGAGATGATGCCGCTCTGTTCGG ACATCACGGGTGTGGCTACC
Product: conjugate transposon protein
Products: NA
Alternate protein names: Conjugate Transposon Protein; TraI Protein; Conserved Protein Found In Conjugate Transposon TraI; Transfer Complex Protein TraI
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MKRIMAVCLAGLLCPTMAVKAQWVTFDPSNLAQSIVNTTRNVVQTTTTAENMVKNFQETVKIYEQGKRYYDALKAVNNLV KDARKVQQTVLLVGEISDIYVNSFQKMLTDGNYTPDELSAIASGYAKMLEESSGMLNEMKIVVTSTGLSMTDKERMDVID RVYRDVRNQRNLVRYYTNRNIGISYLRAKKKNDTQRVLDLYGTDNQKYW
Sequences:
>Translated_209_residues MKRIMAVCLAGLLCPTMAVKAQWVTFDPSNLAQSIVNTTRNVVQTTTTAENMVKNFQETVKIYEQGKRYYDALKAVNNLV KDARKVQQTVLLVGEISDIYVNSFQKMLTDGNYTPDELSAIASGYAKMLEESSGMLNEMKIVVTSTGLSMTDKERMDVID RVYRDVRNQRNLVRYYTNRNIGISYLRAKKKNDTQRVLDLYGTDNQKYW >Mature_209_residues MKRIMAVCLAGLLCPTMAVKAQWVTFDPSNLAQSIVNTTRNVVQTTTTAENMVKNFQETVKIYEQGKRYYDALKAVNNLV KDARKVQQTVLLVGEISDIYVNSFQKMLTDGNYTPDELSAIASGYAKMLEESSGMLNEMKIVVTSTGLSMTDKERMDVID RVYRDVRNQRNLVRYYTNRNIGISYLRAKKKNDTQRVLDLYGTDNQKYW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23927; Mature: 23927
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIMAVCLAGLLCPTMAVKAQWVTFDPSNLAQSIVNTTRNVVQTTTTAENMVKNFQETV CHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIYEQGKRYYDALKAVNNLVKDARKVQQTVLLVGEISDIYVNSFQKMLTDGNYTPDELSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH IASGYAKMLEESSGMLNEMKIVVTSTGLSMTDKERMDVIDRVYRDVRNQRNLVRYYTNRN HHHHHHHHHHHHCCCHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC IGISYLRAKKKNDTQRVLDLYGTDNQKYW CCHHHHHHHCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKRIMAVCLAGLLCPTMAVKAQWVTFDPSNLAQSIVNTTRNVVQTTTTAENMVKNFQETV CHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIYEQGKRYYDALKAVNNLVKDARKVQQTVLLVGEISDIYVNSFQKMLTDGNYTPDELSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH IASGYAKMLEESSGMLNEMKIVVTSTGLSMTDKERMDVIDRVYRDVRNQRNLVRYYTNRN HHHHHHHHHHHHCCCHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC IGISYLRAKKKNDTQRVLDLYGTDNQKYW CCHHHHHHHCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA