| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347672
Identifier: 29347672
GI number: 29347672
Start: 2839360
End: 2840052
Strand: Reverse
Name: 29347672
Synonym: BT_2262
Alternate gene names: NA
Gene position: 2840052-2839360 (Counterclockwise)
Preceding gene: 29347673
Following gene: 29347671
Centisome position: 45.37
GC content: 40.69
Gene sequence:
>693_bases ATGAAAAATATAATATACAGCATATTAGTATGTTTGCCGTTTGTCTTTGGAGCTTGCGACAAATCAACAGATGACACTTC TAAAGTCACCTATTTTGTTACGTTGGAAAGAGAGGGTGATGAAAAGATCGTTTTAGAAAAAGGGCAACCCTTTGTGGAGC CGGGATATTATGCGGAAATGAACGGAGAAGATATTACTGAATCTGTTCAGATAAAAGGTAGTGTTGATGTCAACACTCCG GGAATCTACAATTTAGTATATGCGGCATACAACGAGGACGGTTTTGCCAAAACATTTACACGAACAGTATATGTGGCAGA TAATACTGCTTCTCCTTTGAAATCCGGAATTTATACCGTAGCCGAAGGAAGCAAACGTACCGCCCCTTCTGTGGTAGCTT TCAGTGGATATGAGATTGTGATTTTCCAGATGGAACCGGGGATTTTTTATATCAGCGATTTCTTAGGAGGCTGGTATGAC CAGCGTGCTGGCTATGGACCGGACTATGCAATGGTTGGCAAATTCGAATTGAATGATGATAATACCATTACTCCTCTGGA AAGTTATGTTGCAGGTTGGGGAGATTCCATGGATCAAATGACTAATACATTATTGGACCCTGCGACTGGGACTCTGAAAT GGACTGTTGCTTATGCCGGTCAGCTATCTTTTGACATTATAGTAAAACAATAA
Upstream 100 bases:
>100_bases CGCACGTCAGCAAAATGTGAATACTCCTGCAGGGGTACCGGGAAGTACTCCGGTTTGGTGGGATATCAAATAGTAACCAA TAACTTAGTAAGTTTTACGT
Downstream 100 bases:
>100_bases AAATACGATTATGAAGAAATATATGATATTACTTTTAGCTTCACTGGCTTTTACATTCGTGGCATGCGACAACGATACAG AACCAGGTGGTACTGCTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MKNIIYSILVCLPFVFGACDKSTDDTSKVTYFVTLEREGDEKIVLEKGQPFVEPGYYAEMNGEDITESVQIKGSVDVNTP GIYNLVYAAYNEDGFAKTFTRTVYVADNTASPLKSGIYTVAEGSKRTAPSVVAFSGYEIVIFQMEPGIFYISDFLGGWYD QRAGYGPDYAMVGKFELNDDNTITPLESYVAGWGDSMDQMTNTLLDPATGTLKWTVAYAGQLSFDIIVKQ
Sequences:
>Translated_230_residues MKNIIYSILVCLPFVFGACDKSTDDTSKVTYFVTLEREGDEKIVLEKGQPFVEPGYYAEMNGEDITESVQIKGSVDVNTP GIYNLVYAAYNEDGFAKTFTRTVYVADNTASPLKSGIYTVAEGSKRTAPSVVAFSGYEIVIFQMEPGIFYISDFLGGWYD QRAGYGPDYAMVGKFELNDDNTITPLESYVAGWGDSMDQMTNTLLDPATGTLKWTVAYAGQLSFDIIVKQ >Mature_230_residues MKNIIYSILVCLPFVFGACDKSTDDTSKVTYFVTLEREGDEKIVLEKGQPFVEPGYYAEMNGEDITESVQIKGSVDVNTP GIYNLVYAAYNEDGFAKTFTRTVYVADNTASPLKSGIYTVAEGSKRTAPSVVAFSGYEIVIFQMEPGIFYISDFLGGWYD QRAGYGPDYAMVGKFELNDDNTITPLESYVAGWGDSMDQMTNTLLDPATGTLKWTVAYAGQLSFDIIVKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25396; Mature: 25396
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNIIYSILVCLPFVFGACDKSTDDTSKVTYFVTLEREGDEKIVLEKGQPFVEPGYYAEM CHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCEEEEC NGEDITESVQIKGSVDVNTPGIYNLVYAAYNEDGFAKTFTRTVYVADNTASPLKSGIYTV CCCCCCEEEEEEEEEECCCCCCEEEEEEEECCCCCEEEEEEEEEEECCCCCHHHHCCEEE AEGSKRTAPSVVAFSGYEIVIFQMEPGIFYISDFLGGWYDQRAGYGPDYAMVGKFELNDD ECCCCCCCCCEEEECCCEEEEEEECCCEEEEEHHHCCHHHHCCCCCCCEEEEEEEEECCC NTITPLESYVAGWGDSMDQMTNTLLDPATGTLKWTVAYAGQLSFDIIVKQ CCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEEEC >Mature Secondary Structure MKNIIYSILVCLPFVFGACDKSTDDTSKVTYFVTLEREGDEKIVLEKGQPFVEPGYYAEM CHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCEEEEC NGEDITESVQIKGSVDVNTPGIYNLVYAAYNEDGFAKTFTRTVYVADNTASPLKSGIYTV CCCCCCEEEEEEEEEECCCCCCEEEEEEEECCCCCEEEEEEEEEEECCCCCHHHHCCEEE AEGSKRTAPSVVAFSGYEIVIFQMEPGIFYISDFLGGWYDQRAGYGPDYAMVGKFELNDD ECCCCCCCCCEEEECCCEEEEEEECCCEEEEEHHHCCHHHHCCCCCCCEEEEEEEEECCC NTITPLESYVAGWGDSMDQMTNTLLDPATGTLKWTVAYAGQLSFDIIVKQ CCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA