Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347669

Identifier: 29347669

GI number: 29347669

Start: 2834000

End: 2835466

Strand: Reverse

Name: 29347669

Synonym: BT_2259

Alternate gene names: NA

Gene position: 2835466-2834000 (Counterclockwise)

Preceding gene: 29347670

Following gene: 29347668

Centisome position: 45.29

GC content: 41.85

Gene sequence:

>1467_bases
ATGATTATGAAAAAGAAAATATTAGCATATGCATTGAGCGCTTTGACATGTGGGTTATTTACTTCATGCAGCGACTGGCT
TGATATCAACCATGACCCCAATACTGCCGAGAAAGTTGATCCCGGATATTTGTTTAACTATGTAGCCGTAAACTGGGCCG
GAACACGTACCGGTGGTGACTTCTATATTCCGTTATCAATGAGTTCACAGTGTCAGGTTGATGGTGGACTTGATTATGGT
GGCTGGGATGAATCGGTATATACCATTTCCCCTTATAGTACAGGAAATACGTGGAAACATTACTACTCTGTCGGTGGTAA
TAACTTGATGCTGGCTATTAAAAATGCGGAAGAAGCAGATCCGGTGAATCACAATGCTATTGCACAGTGTAAGATTCTGT
TGGCTGAACATATGTATGAAGCGACGATGCTATGGGGGGATATCCCTTTCACTGAATCTTGGAACGGAACAATTAAGTAT
CCGAAATTTGATTCTCAGGAAAGTGTATTGAATGGGGTGTTGTCATTGCTTGATGAAGCACTGCAGATCATGGATTTGAA
TGATGCCAATGCGATTGATGAATACGATATCTATTATAAAGGTGATATGAATAAATGGATGACTTTGGCCAAATCTTTAA
AGTTCAGAACACTGATGGTTATGGTGGACAAAGATCCTTCTAAAGCTACTGCCATTGGTACGTTGTTACAGGCTGGAGGC
ATGGTATCATCAGCATCAGATAATTTGGTGTTCCCTTATTCTGCAGAACCGGGTAACCAGAATCCTAAGTATGAACTTAT
AGAATTGGTTGGCGGTACACAGATATTGTTTTTTGCCAGCAACTATATGCTGAAGCCGATGCAGGAACGTAATGACCCCC
GTATTCCTTGTTATTTTGAACCGGGTGCCGACGGTGTATATAGAGGCTTAGGTAACCGTGAACCTGCTGTTACTGATGAC
AAAGATAATATGTTATCATCTGTTGTGAGCAGTTATCTTTTCAGAAAAGATGCACCGGAGTTAATATACTCTTGCCAGGA
GCAGTTGCTTCTGGAAGCGGAAGCTTATGCGCGCGGTTTGGGAGTTGCTCAGAATTTGTCGAAGGCTAATGAATTGTATA
AGAAAGGCATTCGGGAAGCATGTGCATTTTATGGAGTAGCGGAAGCGGATATTGATACATATGTTACAGGTTTGCCGGAA
TTGACAGCGCTGACTCAGGAGAAAGCACTGTATGAGATTCATATGCAGCAGTGGATTGATTTAATGGATCGTCCGTTTGA
GGAGTTTGTACAGTGGAGACGTTCTGGTACTGCTGGAAATGAAGTCCCGACCTTACAAGTGCCGGAAGATGCAACTTCAA
AAGAACTGATCAGAAGATGGGAGTATAGCCCGGAAGAGATGACTGCTAATATCAATGCACCGAAAGAATCTCCGAAAATT
TGGGAAAAGTTATGGTTTGATTTATAA

Upstream 100 bases:

>100_bases
GGTCCTTCTCAGATCGGAGGCGGTGTAGAGTTTAACAGTATCCCTTCTACCAGAAGTTTCGGATTTAATCTCAGACTAAC
ATTGTAAGAATTAAACGAAC

Downstream 100 bases:

>100_bases
TTGAATTATTATAAATGGTTACGAAAAAGAGGACAATACAACATTGTCCTCTTTTTTTTTTGTTATATTTGCGACCATAT
TTAGATTTATATAGTAGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 488; Mature: 488

Protein sequence:

>488_residues
MIMKKKILAYALSALTCGLFTSCSDWLDINHDPNTAEKVDPGYLFNYVAVNWAGTRTGGDFYIPLSMSSQCQVDGGLDYG
GWDESVYTISPYSTGNTWKHYYSVGGNNLMLAIKNAEEADPVNHNAIAQCKILLAEHMYEATMLWGDIPFTESWNGTIKY
PKFDSQESVLNGVLSLLDEALQIMDLNDANAIDEYDIYYKGDMNKWMTLAKSLKFRTLMVMVDKDPSKATAIGTLLQAGG
MVSSASDNLVFPYSAEPGNQNPKYELIELVGGTQILFFASNYMLKPMQERNDPRIPCYFEPGADGVYRGLGNREPAVTDD
KDNMLSSVVSSYLFRKDAPELIYSCQEQLLLEAEAYARGLGVAQNLSKANELYKKGIREACAFYGVAEADIDTYVTGLPE
LTALTQEKALYEIHMQQWIDLMDRPFEEFVQWRRSGTAGNEVPTLQVPEDATSKELIRRWEYSPEEMTANINAPKESPKI
WEKLWFDL

Sequences:

>Translated_488_residues
MIMKKKILAYALSALTCGLFTSCSDWLDINHDPNTAEKVDPGYLFNYVAVNWAGTRTGGDFYIPLSMSSQCQVDGGLDYG
GWDESVYTISPYSTGNTWKHYYSVGGNNLMLAIKNAEEADPVNHNAIAQCKILLAEHMYEATMLWGDIPFTESWNGTIKY
PKFDSQESVLNGVLSLLDEALQIMDLNDANAIDEYDIYYKGDMNKWMTLAKSLKFRTLMVMVDKDPSKATAIGTLLQAGG
MVSSASDNLVFPYSAEPGNQNPKYELIELVGGTQILFFASNYMLKPMQERNDPRIPCYFEPGADGVYRGLGNREPAVTDD
KDNMLSSVVSSYLFRKDAPELIYSCQEQLLLEAEAYARGLGVAQNLSKANELYKKGIREACAFYGVAEADIDTYVTGLPE
LTALTQEKALYEIHMQQWIDLMDRPFEEFVQWRRSGTAGNEVPTLQVPEDATSKELIRRWEYSPEEMTANINAPKESPKI
WEKLWFDL
>Mature_488_residues
MIMKKKILAYALSALTCGLFTSCSDWLDINHDPNTAEKVDPGYLFNYVAVNWAGTRTGGDFYIPLSMSSQCQVDGGLDYG
GWDESVYTISPYSTGNTWKHYYSVGGNNLMLAIKNAEEADPVNHNAIAQCKILLAEHMYEATMLWGDIPFTESWNGTIKY
PKFDSQESVLNGVLSLLDEALQIMDLNDANAIDEYDIYYKGDMNKWMTLAKSLKFRTLMVMVDKDPSKATAIGTLLQAGG
MVSSASDNLVFPYSAEPGNQNPKYELIELVGGTQILFFASNYMLKPMQERNDPRIPCYFEPGADGVYRGLGNREPAVTDD
KDNMLSSVVSSYLFRKDAPELIYSCQEQLLLEAEAYARGLGVAQNLSKANELYKKGIREACAFYGVAEADIDTYVTGLPE
LTALTQEKALYEIHMQQWIDLMDRPFEEFVQWRRSGTAGNEVPTLQVPEDATSKELIRRWEYSPEEMTANINAPKESPKI
WEKLWFDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54868; Mature: 54868

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMKKKILAYALSALTCGLFTSCSDWLDINHDPNTAEKVDPGYLFNYVAVNWAGTRTGGD
CCCHHHHHHHHHHHHHHHHHHCCHHCEECCCCCCCHHHCCCCEEEEEEEEEEEECCCCCE
FYIPLSMSSQCQVDGGLDYGGWDESVYTISPYSTGNTWKHYYSVGGNNLMLAIKNAEEAD
EEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCEEEEEECCCCCCC
PVNHNAIAQCKILLAEHMYEATMLWGDIPFTESWNGTIKYPKFDSQESVLNGVLSLLDEA
CCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHH
LQIMDLNDANAIDEYDIYYKGDMNKWMTLAKSLKFRTLMVMVDKDPSKATAIGTLLQAGG
HHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCEEEEEEEEECCCCHHHHHHHHHHHCC
MVSSASDNLVFPYSAEPGNQNPKYELIELVGGTQILFFASNYMLKPMQERNDPRIPCYFE
CEECCCCCEEEEECCCCCCCCCCCHHHHHHCCCEEEEEECCCCCCCHHHCCCCCCEEEEC
PGADGVYRGLGNREPAVTDDKDNMLSSVVSSYLFRKDAPELIYSCQEQLLLEAEAYARGL
CCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
GVAQNLSKANELYKKGIREACAFYGVAEADIDTYVTGLPELTALTQEKALYEIHMQQWID
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
LMDRPFEEFVQWRRSGTAGNEVPTLQVPEDATSKELIRRWEYSPEEMTANINAPKESPKI
HHCCCHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHCCCHHHEEEECCCCCCCHHH
WEKLWFDL
HHHHHCCC
>Mature Secondary Structure
MIMKKKILAYALSALTCGLFTSCSDWLDINHDPNTAEKVDPGYLFNYVAVNWAGTRTGGD
CCCHHHHHHHHHHHHHHHHHHCCHHCEECCCCCCCHHHCCCCEEEEEEEEEEEECCCCCE
FYIPLSMSSQCQVDGGLDYGGWDESVYTISPYSTGNTWKHYYSVGGNNLMLAIKNAEEAD
EEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCEEEEEECCCCCCC
PVNHNAIAQCKILLAEHMYEATMLWGDIPFTESWNGTIKYPKFDSQESVLNGVLSLLDEA
CCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHH
LQIMDLNDANAIDEYDIYYKGDMNKWMTLAKSLKFRTLMVMVDKDPSKATAIGTLLQAGG
HHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCEEEEEEEEECCCCHHHHHHHHHHHCC
MVSSASDNLVFPYSAEPGNQNPKYELIELVGGTQILFFASNYMLKPMQERNDPRIPCYFE
CEECCCCCEEEEECCCCCCCCCCCHHHHHHCCCEEEEEECCCCCCCHHHCCCCCCEEEEC
PGADGVYRGLGNREPAVTDDKDNMLSSVVSSYLFRKDAPELIYSCQEQLLLEAEAYARGL
CCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
GVAQNLSKANELYKKGIREACAFYGVAEADIDTYVTGLPELTALTQEKALYEIHMQQWID
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
LMDRPFEEFVQWRRSGTAGNEVPTLQVPEDATSKELIRRWEYSPEEMTANINAPKESPKI
HHCCCHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHCCCHHHEEEECCCCCCCHHH
WEKLWFDL
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA