| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347656
Identifier: 29347656
GI number: 29347656
Start: 2814861
End: 2816909
Strand: Reverse
Name: 29347656
Synonym: BT_2246
Alternate gene names: NA
Gene position: 2816909-2814861 (Counterclockwise)
Preceding gene: 29347657
Following gene: 29347655
Centisome position: 45.0
GC content: 43.0
Gene sequence:
>2049_bases ATGAATGCTCGTTGGTTTGACCGGATTATTTATGGCGGGGCTTGGAAACAGATACGTTTCCTGATTATTATAGTCGTTTC GCTGATTGTTTTATCTTGTTTGGGAGTGCACTGGGGAAGCAAGTATCAGATGACTCCTTCGGAAGAGATGACTGTGCTGG CTACTGACTCTGCGGCGAACCATTCTTTTCAGAAGACCCTGTGGAATGTATACAATAACTTTGTTGATTCGGGCAACCTG ATCAGCATAAGTCCGGAAGACCGCCCGTGGGCATTGATTATTAGTTTGCTGGGTTCCGTCGTTTTGGGCGGATTGTTGAT CTCCACGCTTTCCAATATCATTGAAAGGCGGGTGGAAAATTGCAGAAACGGGTTGATTCATTATAAACTATCTGATCATT TTGTGATCATCGGTGCAGATGCAATGTTACCCTGTCTGATACGACAGTTATGCCAACGGGAGAAGGATTGCACGTTAGTC ATTCAGACTTCCAAAGACGTCAATGAAGTACGGATGGAATTATTTTCCAATCTCACAAAGGATGAGGAGAAGAGAATCGT TTTGGTTCATGCCATGAGAGACTCTAAAGAAGAACTGAAAAAGTTGTATGTGGCGGATGCGAAAGAAGTCTTTATATTGG GAGATAGCGGAGAGCTGGATGATGTGGAATATTATCATGACTCGATGAATGTCGACTGTCTGAATCTGATAGGCGAACTT TGCAAGGAAGAGAATCGGAAACCTCCTTTGAAGTGCAACGTACTCTTTGAATATCAATCTACTTTTGCTGTCTTCCAATT CTCGGATATTGATGATGATATAAAGGAATATATTGATTTCTGTCCGTTTAACTTTTACGAAACATGGGCGCAAAAAGTAT TTGTGCGAAATGCGTGTAGTATCCGTGAGATTAATTATCTGCCTCTGGATTATCAGCCTGTCACTTACGAATCAGAGAAA TATGTGCATCTGGTAATTGTGGGAATGTCGAGGATGGGAATTGCTCTGGCTGTCGAGGCTGCCCATATAGCCCACTATCC CAACTTTATCCGGGATAAAAAGAAGAAAACGCGCATCACTTTTATCGATAATGAAGCAATGCGTGAGATGAACAGCTTCA AACAAGCGTATGAAAACCTGTTTGATGTATCTTATTCTACCTTTATAGATACAGAAAACGGAATGGTCCGCAGGGATGAA CCTGCTGAGGTCTATGCTCATTTGGGAACAGATTTTATAGACATAGAATGGCAGTTTGTACAGGGAACTATCGAGTCGCC GGAAGTCCGTGATTTGATTACAGGCTGGTGTGAAGATGAGGATGCGCTGATGACGGTTGCAGTCTGCCTGAACCTGACTC ATCAGTCTATTTCTTCTGCTGTCTATCTCCCGCGTTGTGTCTATGAGAAAGGTGTTCCGGTGCTGGTTCAGCAACGGATA ACATCGGCTATCATTGAAAAATTATCCGGTAATCCGTTGAAGGGAAAAGGAGGAACCAATCAGCGTTTCAAGAATCTTCG TCCGTTCGGGATGTTGGATGATTGTTTCGACTTGTGCATGGCAGACGAGATGTATGCCAAGCGTGTAAATGCGGTGTATG AAAAGTGTGAAGGAGATAAAGTCTTGACGGAACTGCCATCTGCGAAAGAAATGGATGAACTATGGCACAATCCGAAGTTC AAAACGGTAAAGAAATGGTCTAATATTTATAATGCGAATGCCATTCCTACCAAATTGCGTTCAATCGGCTACACCAAGGA ACATTGGGACAACGGAAAGCAACTTAGCGAAAAGCAGGTGGCGATTTTGGCAGAGGTGGAACACAACCGATGGAATGTGG AAGAACTGTTACTGGGATATAGACCTGTGACAAAAAAGGAACAGGAAGAGATAGAACAAAAGGCAGCCTTGAAGAATAAA AAGCGGGATGAAGAATATGCTCATTATGACATTCGCCCTTACAACGATTTGCGGAATGGCAGTGAGAAATATGATATTGC TTTGACACGGCATCTGCTTTTGATTGCGAAGCCGGACGAAAAACTATAA
Upstream 100 bases:
>100_bases GTTGCCGGAAGAAGAAAAAGAGTACGACCGGAATACGGCTATGAATACGATCAAGATGGTGAAGAAATTAGGTTTCAGAA TAGAAAAGGAGGATTAAGTT
Downstream 100 bases:
>100_bases AATGGATTAGGATTTGTGATATGGGGAATCATCAAAAGGAAATATTCTTAGTGCTCTCTATCTTTCTGATTGGCTTTCAG TGCGTTTGGGCACAAACCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 682; Mature: 682
Protein sequence:
>682_residues MNARWFDRIIYGGAWKQIRFLIIIVVSLIVLSCLGVHWGSKYQMTPSEEMTVLATDSAANHSFQKTLWNVYNNFVDSGNL ISISPEDRPWALIISLLGSVVLGGLLISTLSNIIERRVENCRNGLIHYKLSDHFVIIGADAMLPCLIRQLCQREKDCTLV IQTSKDVNEVRMELFSNLTKDEEKRIVLVHAMRDSKEELKKLYVADAKEVFILGDSGELDDVEYYHDSMNVDCLNLIGEL CKEENRKPPLKCNVLFEYQSTFAVFQFSDIDDDIKEYIDFCPFNFYETWAQKVFVRNACSIREINYLPLDYQPVTYESEK YVHLVIVGMSRMGIALAVEAAHIAHYPNFIRDKKKKTRITFIDNEAMREMNSFKQAYENLFDVSYSTFIDTENGMVRRDE PAEVYAHLGTDFIDIEWQFVQGTIESPEVRDLITGWCEDEDALMTVAVCLNLTHQSISSAVYLPRCVYEKGVPVLVQQRI TSAIIEKLSGNPLKGKGGTNQRFKNLRPFGMLDDCFDLCMADEMYAKRVNAVYEKCEGDKVLTELPSAKEMDELWHNPKF KTVKKWSNIYNANAIPTKLRSIGYTKEHWDNGKQLSEKQVAILAEVEHNRWNVEELLLGYRPVTKKEQEEIEQKAALKNK KRDEEYAHYDIRPYNDLRNGSEKYDIALTRHLLLIAKPDEKL
Sequences:
>Translated_682_residues MNARWFDRIIYGGAWKQIRFLIIIVVSLIVLSCLGVHWGSKYQMTPSEEMTVLATDSAANHSFQKTLWNVYNNFVDSGNL ISISPEDRPWALIISLLGSVVLGGLLISTLSNIIERRVENCRNGLIHYKLSDHFVIIGADAMLPCLIRQLCQREKDCTLV IQTSKDVNEVRMELFSNLTKDEEKRIVLVHAMRDSKEELKKLYVADAKEVFILGDSGELDDVEYYHDSMNVDCLNLIGEL CKEENRKPPLKCNVLFEYQSTFAVFQFSDIDDDIKEYIDFCPFNFYETWAQKVFVRNACSIREINYLPLDYQPVTYESEK YVHLVIVGMSRMGIALAVEAAHIAHYPNFIRDKKKKTRITFIDNEAMREMNSFKQAYENLFDVSYSTFIDTENGMVRRDE PAEVYAHLGTDFIDIEWQFVQGTIESPEVRDLITGWCEDEDALMTVAVCLNLTHQSISSAVYLPRCVYEKGVPVLVQQRI TSAIIEKLSGNPLKGKGGTNQRFKNLRPFGMLDDCFDLCMADEMYAKRVNAVYEKCEGDKVLTELPSAKEMDELWHNPKF KTVKKWSNIYNANAIPTKLRSIGYTKEHWDNGKQLSEKQVAILAEVEHNRWNVEELLLGYRPVTKKEQEEIEQKAALKNK KRDEEYAHYDIRPYNDLRNGSEKYDIALTRHLLLIAKPDEKL >Mature_682_residues MNARWFDRIIYGGAWKQIRFLIIIVVSLIVLSCLGVHWGSKYQMTPSEEMTVLATDSAANHSFQKTLWNVYNNFVDSGNL ISISPEDRPWALIISLLGSVVLGGLLISTLSNIIERRVENCRNGLIHYKLSDHFVIIGADAMLPCLIRQLCQREKDCTLV IQTSKDVNEVRMELFSNLTKDEEKRIVLVHAMRDSKEELKKLYVADAKEVFILGDSGELDDVEYYHDSMNVDCLNLIGEL CKEENRKPPLKCNVLFEYQSTFAVFQFSDIDDDIKEYIDFCPFNFYETWAQKVFVRNACSIREINYLPLDYQPVTYESEK YVHLVIVGMSRMGIALAVEAAHIAHYPNFIRDKKKKTRITFIDNEAMREMNSFKQAYENLFDVSYSTFIDTENGMVRRDE PAEVYAHLGTDFIDIEWQFVQGTIESPEVRDLITGWCEDEDALMTVAVCLNLTHQSISSAVYLPRCVYEKGVPVLVQQRI TSAIIEKLSGNPLKGKGGTNQRFKNLRPFGMLDDCFDLCMADEMYAKRVNAVYEKCEGDKVLTELPSAKEMDELWHNPKF KTVKKWSNIYNANAIPTKLRSIGYTKEHWDNGKQLSEKQVAILAEVEHNRWNVEELLLGYRPVTKKEQEEIEQKAALKNK KRDEEYAHYDIRPYNDLRNGSEKYDIALTRHLLLIAKPDEKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78759; Mature: 78759
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNARWFDRIIYGGAWKQIRFLIIIVVSLIVLSCLGVHWGSKYQMTPSEEMTVLATDSAAN CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCC HSFQKTLWNVYNNFVDSGNLISISPEDRPWALIISLLGSVVLGGLLISTLSNIIERRVEN CHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CRNGLIHYKLSDHFVIIGADAMLPCLIRQLCQREKDCTLVIQTSKDVNEVRMELFSNLTK HHCCEEEEEECCCEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCC DEEKRIVLVHAMRDSKEELKKLYVADAKEVFILGDSGELDDVEYYHDSMNVDCLNLIGEL CCCCEEEEEEECCCCHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHCCCCCHHHHHHHHH CKEENRKPPLKCNVLFEYQSTFAVFQFSDIDDDIKEYIDFCPFNFYETWAQKVFVRNACS HHHCCCCCCEEEEEEEEECCCEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCC IREINYLPLDYQPVTYESEKYVHLVIVGMSRMGIALAVEAAHIAHYPNFIRDKKKKTRIT EEECEECCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEHHHHHHHCCHHHHCCCCCCEEE FIDNEAMREMNSFKQAYENLFDVSYSTFIDTENGMVRRDEPAEVYAHLGTDFIDIEWQFV EECCHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCEECCCHHHHHHHCCCCEEEEEEEEE QGTIESPEVRDLITGWCEDEDALMTVAVCLNLTHQSISSAVYLPRCVYEKGVPVLVQQRI ECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH TSAIIEKLSGNPLKGKGGTNQRFKNLRPFGMLDDCFDLCMADEMYAKRVNAVYEKCEGDK HHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH VLTELPSAKEMDELWHNPKFKTVKKWSNIYNANAIPTKLRSIGYTKEHWDNGKQLSEKQV HHHHCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCHHHCCCCCHHCHHHE AILAEVEHNRWNVEELLLGYRPVTKKEQEEIEQKAALKNKKRDEEYAHYDIRPYNDLRNG EEEEEECCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHCCCCCCCCHHHCCC SEKYDIALTRHLLLIAKPDEKL CCCEEEEEEEEEEEEECCCCCC >Mature Secondary Structure MNARWFDRIIYGGAWKQIRFLIIIVVSLIVLSCLGVHWGSKYQMTPSEEMTVLATDSAAN CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCC HSFQKTLWNVYNNFVDSGNLISISPEDRPWALIISLLGSVVLGGLLISTLSNIIERRVEN CHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CRNGLIHYKLSDHFVIIGADAMLPCLIRQLCQREKDCTLVIQTSKDVNEVRMELFSNLTK HHCCEEEEEECCCEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCC DEEKRIVLVHAMRDSKEELKKLYVADAKEVFILGDSGELDDVEYYHDSMNVDCLNLIGEL CCCCEEEEEEECCCCHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHCCCCCHHHHHHHHH CKEENRKPPLKCNVLFEYQSTFAVFQFSDIDDDIKEYIDFCPFNFYETWAQKVFVRNACS HHHCCCCCCEEEEEEEEECCCEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCC IREINYLPLDYQPVTYESEKYVHLVIVGMSRMGIALAVEAAHIAHYPNFIRDKKKKTRIT EEECEECCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEHHHHHHHCCHHHHCCCCCCEEE FIDNEAMREMNSFKQAYENLFDVSYSTFIDTENGMVRRDEPAEVYAHLGTDFIDIEWQFV EECCHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCEECCCHHHHHHHCCCCEEEEEEEEE QGTIESPEVRDLITGWCEDEDALMTVAVCLNLTHQSISSAVYLPRCVYEKGVPVLVQQRI ECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH TSAIIEKLSGNPLKGKGGTNQRFKNLRPFGMLDDCFDLCMADEMYAKRVNAVYEKCEGDK HHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH VLTELPSAKEMDELWHNPKFKTVKKWSNIYNANAIPTKLRSIGYTKEHWDNGKQLSEKQV HHHHCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCHHHCCCCCHHCHHHE AILAEVEHNRWNVEELLLGYRPVTKKEQEEIEQKAALKNKKRDEEYAHYDIRPYNDLRNG EEEEEECCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHCCCCCCCCHHHCCC SEKYDIALTRHLLLIAKPDEKL CCCEEEEEEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA