| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347610
Identifier: 29347610
GI number: 29347610
Start: 2765368
End: 2767272
Strand: Reverse
Name: 29347610
Synonym: BT_2200
Alternate gene names: NA
Gene position: 2767272-2765368 (Counterclockwise)
Preceding gene: 29347611
Following gene: 29347609
Centisome position: 44.2
GC content: 45.04
Gene sequence:
>1905_bases ATGAAAGAAATAATTATGAAAATGACTATATGTGGTGCTGCACTGTTGCTCAGCTTGACAATGGCTAGTTGTGAAGTGTA CGAATCGCCGGAAATCAATCAAGGATTGAACGAAGAAAACAACACGTCCCTTTATACAGATGCTTATGATCCGATCAGTA ATGTGGGTCAATACTATATGCCGGAAATGAAGGTGAAACCGAAGAAATACTGGAATTGTGTGGAAGTCGTAACGGTAGGC AGCCGTAATGAACTGGGACAAACAGAAAAAGTACGCGGATTACAGTACCACCTGATGTGTCAGTCATTAGCCGGTCTGGC TAATCGTGCCGTAGAACAGGGAACAAGTGAAATAGCTGTTTGGCTGCACGATCACGGTGGCAGTGATTCCTATAAACTGT CTAAGCAGGCACTCGAAGATATGGGTATCCACGAACAGGGGATGCAGAGCGGACTGGAACTGGCACGTAATGATTATGGT CCGTCCGACGGAGTGACTATTCAGCTGAAAGGTATGTTTGACGGATATGTCTTGACGGATATTGAGCATAATCCGGAGAG TGGTGTTGTAGCTTCCGTTGCTTCTCATGTTTATAATTCTATTATTGTGGATGTCCGTGACAAGGAATATTATGAAGAAG CAGGATATACCATGAAATATGATGCAAGAAGCAAAACTACTGCACAGGCATGGGCGGAGTTCAAAGACAAATGCAGCAAC AAAGCATTGGTGATCATGCCTGTACAAACCGGTGAATTGCGTGAGTTTGCTATTAAGAATGAACTTTTCGTATTGAACTT GAATAAGCGTCAGGGCAGTTCGGCTGGCGGACAGAATACGGCTTTGCTGAAAGAAATCCTTGCCTGGCTGGAACCGAATG CACCTGTCTACGGATGGGAACAGGGAGTAAGTGAAGATGCTTTTGTCGATTTGGTTTCCAAAAGCGGTCATCCGATGATC CCTTGTGACTGGAGTTACAATCATTCCTTGACTTCATTGCTTTATTCTCAACGTCAGAAATCGACATTGGCTCGCGTGAA GAATCCGCAGTTTCTGGATTATACAAAGAAAAAGAATTTCGTTTCTTTCTTCCTTTCCGATGGTGACAATATTCAGTGGA TGATGAATGACTTTAAAGATTTCTATAATGCGGCGGAGTCGGAAGAAGTACGGATGACGTATGGTATTGCTGCTTCAGTG CTTCCGATGATGGCACCGGCACAATTCGATAATCTGCTGAGTCAGCAAAAGCCGAATTGCTCTATTTTGGAAATGCTGGG AGGCGGTTACTATTACGTAGACAATTATAGCGAGAATGGCGACCGGGCGAAGAATTTGAAAGTCGTGGCAGAACGCCTTT CGGCGCATATGCGTCAACATCGTGTGAAACTGCTGGGTGTAATGGCTATGAACGTAAAATCAGAGGCTGCCAAAGAAGCA TTTCAGGCTTATGTAGATGCCAATGACCAGTTGGAAGGTATCGTAGCGCTTCAGTATAGTCCTTATGCAGGAGGTGAAGG AGACATTATTTGGGTAACGAATAAAGCAGGGTATGATATCCCGGCCATTACGGTGAAATACTCTTTGTGGAATTTTGGAA ACCGGAATGCGGAACGTGAAGGTACCCCTGCCTATATTGCCGGAAGATTGAAACAGGAAGCACAGCAGGAAAGTTTTTCT GTCGTATGTGTGCATGCATGGAGTAATTTCTCCGATCACGGACAGACGGAAGACCCGCTGATTGAGAACCAGTCCGGGGA TATTCGTGGAGCCGGAGCGGCAAAGCTTTGTGCAGGACATCTGAACGATAGTTTTGAAGTCGTAAATATGCAGGAACTGG TGTGGCGTTTGCGTATGAGCCAGCGTCCGGAACAGACGAAGAAGTATCTGAGTGAGGTATTTTAA
Upstream 100 bases:
>100_bases GAACAAGAACCATCTGGTACGCCCCATTCCGCAAGATGAACGGAACAAGGTAGATGGATTATCGCAGAATGAAGGTTATT GATTAATGGTTAACTAACAA
Downstream 100 bases:
>100_bases TTAACCTGAGTTTCACAGGCTTTCTGCATGGTTTTCTCTGTTTTAACGTGGAAGGAGAAGTGATACAGAAGGCTTGTGAA ACTTAAGCAAATAATAATAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 634; Mature: 634
Protein sequence:
>634_residues MKEIIMKMTICGAALLLSLTMASCEVYESPEINQGLNEENNTSLYTDAYDPISNVGQYYMPEMKVKPKKYWNCVEVVTVG SRNELGQTEKVRGLQYHLMCQSLAGLANRAVEQGTSEIAVWLHDHGGSDSYKLSKQALEDMGIHEQGMQSGLELARNDYG PSDGVTIQLKGMFDGYVLTDIEHNPESGVVASVASHVYNSIIVDVRDKEYYEEAGYTMKYDARSKTTAQAWAEFKDKCSN KALVIMPVQTGELREFAIKNELFVLNLNKRQGSSAGGQNTALLKEILAWLEPNAPVYGWEQGVSEDAFVDLVSKSGHPMI PCDWSYNHSLTSLLYSQRQKSTLARVKNPQFLDYTKKKNFVSFFLSDGDNIQWMMNDFKDFYNAAESEEVRMTYGIAASV LPMMAPAQFDNLLSQQKPNCSILEMLGGGYYYVDNYSENGDRAKNLKVVAERLSAHMRQHRVKLLGVMAMNVKSEAAKEA FQAYVDANDQLEGIVALQYSPYAGGEGDIIWVTNKAGYDIPAITVKYSLWNFGNRNAEREGTPAYIAGRLKQEAQQESFS VVCVHAWSNFSDHGQTEDPLIENQSGDIRGAGAAKLCAGHLNDSFEVVNMQELVWRLRMSQRPEQTKKYLSEVF
Sequences:
>Translated_634_residues MKEIIMKMTICGAALLLSLTMASCEVYESPEINQGLNEENNTSLYTDAYDPISNVGQYYMPEMKVKPKKYWNCVEVVTVG SRNELGQTEKVRGLQYHLMCQSLAGLANRAVEQGTSEIAVWLHDHGGSDSYKLSKQALEDMGIHEQGMQSGLELARNDYG PSDGVTIQLKGMFDGYVLTDIEHNPESGVVASVASHVYNSIIVDVRDKEYYEEAGYTMKYDARSKTTAQAWAEFKDKCSN KALVIMPVQTGELREFAIKNELFVLNLNKRQGSSAGGQNTALLKEILAWLEPNAPVYGWEQGVSEDAFVDLVSKSGHPMI PCDWSYNHSLTSLLYSQRQKSTLARVKNPQFLDYTKKKNFVSFFLSDGDNIQWMMNDFKDFYNAAESEEVRMTYGIAASV LPMMAPAQFDNLLSQQKPNCSILEMLGGGYYYVDNYSENGDRAKNLKVVAERLSAHMRQHRVKLLGVMAMNVKSEAAKEA FQAYVDANDQLEGIVALQYSPYAGGEGDIIWVTNKAGYDIPAITVKYSLWNFGNRNAEREGTPAYIAGRLKQEAQQESFS VVCVHAWSNFSDHGQTEDPLIENQSGDIRGAGAAKLCAGHLNDSFEVVNMQELVWRLRMSQRPEQTKKYLSEVF >Mature_634_residues MKEIIMKMTICGAALLLSLTMASCEVYESPEINQGLNEENNTSLYTDAYDPISNVGQYYMPEMKVKPKKYWNCVEVVTVG SRNELGQTEKVRGLQYHLMCQSLAGLANRAVEQGTSEIAVWLHDHGGSDSYKLSKQALEDMGIHEQGMQSGLELARNDYG PSDGVTIQLKGMFDGYVLTDIEHNPESGVVASVASHVYNSIIVDVRDKEYYEEAGYTMKYDARSKTTAQAWAEFKDKCSN KALVIMPVQTGELREFAIKNELFVLNLNKRQGSSAGGQNTALLKEILAWLEPNAPVYGWEQGVSEDAFVDLVSKSGHPMI PCDWSYNHSLTSLLYSQRQKSTLARVKNPQFLDYTKKKNFVSFFLSDGDNIQWMMNDFKDFYNAAESEEVRMTYGIAASV LPMMAPAQFDNLLSQQKPNCSILEMLGGGYYYVDNYSENGDRAKNLKVVAERLSAHMRQHRVKLLGVMAMNVKSEAAKEA FQAYVDANDQLEGIVALQYSPYAGGEGDIIWVTNKAGYDIPAITVKYSLWNFGNRNAEREGTPAYIAGRLKQEAQQESFS VVCVHAWSNFSDHGQTEDPLIENQSGDIRGAGAAKLCAGHLNDSFEVVNMQELVWRLRMSQRPEQTKKYLSEVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71016; Mature: 71016
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEIIMKMTICGAALLLSLTMASCEVYESPEINQGLNEENNTSLYTDAYDPISNVGQYYM CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHCC PEMKVKPKKYWNCVEVVTVGSRNELGQTEKVRGLQYHLMCQSLAGLANRAVEQGTSEIAV CCCCCCHHHHCCEEEEEEECCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEE WLHDHGGSDSYKLSKQALEDMGIHEQGMQSGLELARNDYGPSDGVTIQLKGMFDGYVLTD EEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCEEEEE IEHNPESGVVASVASHVYNSIIVDVRDKEYYEEAGYTMKYDARSKTTAQAWAEFKDKCSN CCCCCCCCHHHHHHHHHHHHEEEEECCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCC KALVIMPVQTGELREFAIKNELFVLNLNKRQGSSAGGQNTALLKEILAWLEPNAPVYGWE CEEEEEECCCCCHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHH QGVSEDAFVDLVSKSGHPMIPCDWSYNHSLTSLLYSQRQKSTLARVKNPQFLDYTKKKNF CCCCCHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCE VSFFLSDGDNIQWMMNDFKDFYNAAESEEVRMTYGIAASVLPMMAPAQFDNLLSQQKPNC EEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCHHHHHHHHHCCCCCC SILEMLGGGYYYVDNYSENGDRAKNLKVVAERLSAHMRQHRVKLLGVMAMNVKSEAAKEA HHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH FQAYVDANDQLEGIVALQYSPYAGGEGDIIWVTNKAGYDIPAITVKYSLWNFGNRNAERE HHHHHCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCCCC GTPAYIAGRLKQEAQQESFSVVCVHAWSNFSDHGQTEDPLIENQSGDIRGAGAAKLCAGH CCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHC LNDSFEVVNMQELVWRLRMSQRPEQTKKYLSEVF CCCCEEEECHHHHHHHHHHCCCHHHHHHHHHHCC >Mature Secondary Structure MKEIIMKMTICGAALLLSLTMASCEVYESPEINQGLNEENNTSLYTDAYDPISNVGQYYM CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHCC PEMKVKPKKYWNCVEVVTVGSRNELGQTEKVRGLQYHLMCQSLAGLANRAVEQGTSEIAV CCCCCCHHHHCCEEEEEEECCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEE WLHDHGGSDSYKLSKQALEDMGIHEQGMQSGLELARNDYGPSDGVTIQLKGMFDGYVLTD EEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCEEEEE IEHNPESGVVASVASHVYNSIIVDVRDKEYYEEAGYTMKYDARSKTTAQAWAEFKDKCSN CCCCCCCCHHHHHHHHHHHHEEEEECCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCC KALVIMPVQTGELREFAIKNELFVLNLNKRQGSSAGGQNTALLKEILAWLEPNAPVYGWE CEEEEEECCCCCHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHH QGVSEDAFVDLVSKSGHPMIPCDWSYNHSLTSLLYSQRQKSTLARVKNPQFLDYTKKKNF CCCCCHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCE VSFFLSDGDNIQWMMNDFKDFYNAAESEEVRMTYGIAASVLPMMAPAQFDNLLSQQKPNC EEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCHHHHHHHHHCCCCCC SILEMLGGGYYYVDNYSENGDRAKNLKVVAERLSAHMRQHRVKLLGVMAMNVKSEAAKEA HHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH FQAYVDANDQLEGIVALQYSPYAGGEGDIIWVTNKAGYDIPAITVKYSLWNFGNRNAERE HHHHHCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCCCC GTPAYIAGRLKQEAQQESFSVVCVHAWSNFSDHGQTEDPLIENQSGDIRGAGAAKLCAGH CCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHC LNDSFEVVNMQELVWRLRMSQRPEQTKKYLSEVF CCCCEEEECHHHHHHHHHHCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA