| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is fusA [H]
Identifier: 29347577
GI number: 29347577
Start: 2725620
End: 2727776
Strand: Reverse
Name: fusA [H]
Synonym: BT_2167
Alternate gene names: 29347577
Gene position: 2727776-2725620 (Counterclockwise)
Preceding gene: 29347584
Following gene: 29347576
Centisome position: 43.57
GC content: 43.63
Gene sequence:
>2157_bases ATGAAAGTATATCAGACTAATGAAATTAAGAACATTGCCTTGTTGGGAAGTTCTGGCTCTGGGAAAACCACTCTCGTGGA AGCGATGCTTTTCGAGAGTGGTGTTATAAAACGTCGCGGATCTGTTGCCGCAAAAAACACAGTTAGCGATTATTTCCCTG TTGAACAAGAGTATGGTTACTCCGTTTTCTCTACCGTTCTCCACGTAGAATGGAACAATAAAAAGCTTAATATTATAGAC TGTCCGGGTTCGGACGACTTCGTTGGCAGTACGGTAACTGCACTTAATGTGACCGACACAGCAATTATTCTTCTCAATGG CCAATACGGCGTCGAAGTCGGTACACAAAATCACTTCCGATACACTGAAAAATTGAATAAGCCAGTTATTTTTCTAGTCA ACCAGCTTGATAATGAAAAATGCGACTATGATAATATCCTCGAACAACTGAAAGAAGCGTATGGATCTAAGGTGGTTCCC ATCCAGTATCCTATTGCTACCGGTCCGGGCTTTAATGCCTTGATTGACGTATTGTTGATGAAAAAATATTCGTGGAAACC CGAAGGCGGTGCTCCTGTGATTGAAGATATTCCGGCAGAAGAAATGGATAAGGCTATGGAAATGCATAAAGCATTGGTAG AAGCTGCTGCCGAAAATGACGAAGGACTGATGGAGAAATTTTTTGAACAAGATTCTCTGACAGAAGATGAAATGCGTGAA GGTATCCGTAAGGGATTGATCGCCAGAGGTATGTTCCCAGTATTCTGTGTTTGCGGTGGTAAGGACATGGGCGTTCGCCG TCTGATGGAATTCCTTGGCAACGTAGTTCCTTTCGTGTCTGAAATGCCGAAAGTGGAAAACACAGATGGTAAGGAAGTAG CTCCGGACGTAAACGGTCCCGAATCTTTGTATTTCTTCAAAACGAGTGTCGAGCCGCATATCGGTGAAGTATCTTACTTT AAAGTAATGAGCGGCAAGGTTCGTGAAGGTGATGACTTGCTGAATGCCGACCGTGGTTCGAAAGAACGTATCGCTCAGAT TTATGTCGTAGCTGGTGGTAACCGTGTGAAAGTGGAAGAACTTCAGGCGGGTGATATCGGTGCTGCCGTAAAACTGAAAG ATGTGAAGACAGGCAATACACTCAACGGTAAAGACTGCGATTATAAATTCAACTTTATCAAATATCCGAATTCTAAATAT TCCCGTGCTATTAAACCGGTGAACGAAGCGGACGTGGAAAAGATGATGACCATCCTGAACCGTATGCGTGAAGAAGATCC GACATGGGTGATCGAGCAATCGAAAGAATTGAAGCAAACGCTGGTACACGGACAGGGAGAATTCCATCTGCGTACGTTGA AGTGGCGTCTGGAAAATAATGAAAAACTTCAGGTTAAATTTGAGGAACCGAAGATTCCGTATCGTGAAACGATTACGAAG GCTGCCCGTGCCGATTATCGTCATAAGAAACAATCCGGTGGTGCTGGTCAGTTCGGTGAAGTTCACCTGATCGTTGAACC TTATAAAGAAGGTATGCCTGTGCCCGATACTTACAAATTCAATGGACAGGAATTTAAGATTACCGTGAGAGGTACTGAAG AAATTCCATTGGAATGGGGCGGTAAACTGGTATTTATTAACAGTATCGTAGGTGGTTCTATCGATGCCCGTTTCTTGCCT GCTATTATGAAAGGTATCATGTCACGCCTGGAACAAGGCCCGTTGACAGGTTCGTATGCCCGTGACGTACGTGTAATCGT ATATGATGGTAAGATGCACCCGGTAGACTCAAATGAAATCTCCTTTATGCTTGCCGGACGTAACGCATTCAGTGAAGCCT TCAAGAATGCCGGTCCGAAGATTTTGGAACCGATTTATGATGTGGAAGTATTTGTTCCGTCCGACAGAATGGGTGATGTG ATGGGAGATCTTCAAGGACGCCGTGCCATGATTATGGGTATGAGCAGCGAAAAAGGTTTCGAGAAACTTGTTGCTAAAGT ACCTTTGAAGGAAATGTCTTCATATTCGACAGCACTTAGCTCACTTACCGGCGGACGTGCTTCATTTATCATGAAGTTTG CTAGTTATGAACTTGTTCCGACAGATGTTCAGGATAAGTTGATTAAGGATTTTGAAGCTAAACAAACAGAGGAATAA
Upstream 100 bases:
>100_bases CATAAATATTGCTTTTCCCCCAATAAATCCCTAATTTGCGCATCACTAAATTAATGGTATGCGAGAAACATACTGAGTAA TTACTAAAATCTTATATATT
Downstream 100 bases:
>100_bases ACAATAATTCTCTCAAAACTGTTAAAACCGTTGTCTTTTTTAAGTAAAAGACAGCGGTTTTTGTTTAACTATGATTAATA AAGATGGAAAATCGCAAGGA
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: EF-G [H]
Number of amino acids: Translated: 718; Mature: 718
Protein sequence:
>718_residues MKVYQTNEIKNIALLGSSGSGKTTLVEAMLFESGVIKRRGSVAAKNTVSDYFPVEQEYGYSVFSTVLHVEWNNKKLNIID CPGSDDFVGSTVTALNVTDTAIILLNGQYGVEVGTQNHFRYTEKLNKPVIFLVNQLDNEKCDYDNILEQLKEAYGSKVVP IQYPIATGPGFNALIDVLLMKKYSWKPEGGAPVIEDIPAEEMDKAMEMHKALVEAAAENDEGLMEKFFEQDSLTEDEMRE GIRKGLIARGMFPVFCVCGGKDMGVRRLMEFLGNVVPFVSEMPKVENTDGKEVAPDVNGPESLYFFKTSVEPHIGEVSYF KVMSGKVREGDDLLNADRGSKERIAQIYVVAGGNRVKVEELQAGDIGAAVKLKDVKTGNTLNGKDCDYKFNFIKYPNSKY SRAIKPVNEADVEKMMTILNRMREEDPTWVIEQSKELKQTLVHGQGEFHLRTLKWRLENNEKLQVKFEEPKIPYRETITK AARADYRHKKQSGGAGQFGEVHLIVEPYKEGMPVPDTYKFNGQEFKITVRGTEEIPLEWGGKLVFINSIVGGSIDARFLP AIMKGIMSRLEQGPLTGSYARDVRVIVYDGKMHPVDSNEISFMLAGRNAFSEAFKNAGPKILEPIYDVEVFVPSDRMGDV MGDLQGRRAMIMGMSSEKGFEKLVAKVPLKEMSSYSTALSSLTGGRASFIMKFASYELVPTDVQDKLIKDFEAKQTEE
Sequences:
>Translated_718_residues MKVYQTNEIKNIALLGSSGSGKTTLVEAMLFESGVIKRRGSVAAKNTVSDYFPVEQEYGYSVFSTVLHVEWNNKKLNIID CPGSDDFVGSTVTALNVTDTAIILLNGQYGVEVGTQNHFRYTEKLNKPVIFLVNQLDNEKCDYDNILEQLKEAYGSKVVP IQYPIATGPGFNALIDVLLMKKYSWKPEGGAPVIEDIPAEEMDKAMEMHKALVEAAAENDEGLMEKFFEQDSLTEDEMRE GIRKGLIARGMFPVFCVCGGKDMGVRRLMEFLGNVVPFVSEMPKVENTDGKEVAPDVNGPESLYFFKTSVEPHIGEVSYF KVMSGKVREGDDLLNADRGSKERIAQIYVVAGGNRVKVEELQAGDIGAAVKLKDVKTGNTLNGKDCDYKFNFIKYPNSKY SRAIKPVNEADVEKMMTILNRMREEDPTWVIEQSKELKQTLVHGQGEFHLRTLKWRLENNEKLQVKFEEPKIPYRETITK AARADYRHKKQSGGAGQFGEVHLIVEPYKEGMPVPDTYKFNGQEFKITVRGTEEIPLEWGGKLVFINSIVGGSIDARFLP AIMKGIMSRLEQGPLTGSYARDVRVIVYDGKMHPVDSNEISFMLAGRNAFSEAFKNAGPKILEPIYDVEVFVPSDRMGDV MGDLQGRRAMIMGMSSEKGFEKLVAKVPLKEMSSYSTALSSLTGGRASFIMKFASYELVPTDVQDKLIKDFEAKQTEE >Mature_718_residues MKVYQTNEIKNIALLGSSGSGKTTLVEAMLFESGVIKRRGSVAAKNTVSDYFPVEQEYGYSVFSTVLHVEWNNKKLNIID CPGSDDFVGSTVTALNVTDTAIILLNGQYGVEVGTQNHFRYTEKLNKPVIFLVNQLDNEKCDYDNILEQLKEAYGSKVVP IQYPIATGPGFNALIDVLLMKKYSWKPEGGAPVIEDIPAEEMDKAMEMHKALVEAAAENDEGLMEKFFEQDSLTEDEMRE GIRKGLIARGMFPVFCVCGGKDMGVRRLMEFLGNVVPFVSEMPKVENTDGKEVAPDVNGPESLYFFKTSVEPHIGEVSYF KVMSGKVREGDDLLNADRGSKERIAQIYVVAGGNRVKVEELQAGDIGAAVKLKDVKTGNTLNGKDCDYKFNFIKYPNSKY SRAIKPVNEADVEKMMTILNRMREEDPTWVIEQSKELKQTLVHGQGEFHLRTLKWRLENNEKLQVKFEEPKIPYRETITK AARADYRHKKQSGGAGQFGEVHLIVEPYKEGMPVPDTYKFNGQEFKITVRGTEEIPLEWGGKLVFINSIVGGSIDARFLP AIMKGIMSRLEQGPLTGSYARDVRVIVYDGKMHPVDSNEISFMLAGRNAFSEAFKNAGPKILEPIYDVEVFVPSDRMGDV MGDLQGRRAMIMGMSSEKGFEKLVAKVPLKEMSSYSTALSSLTGGRASFIMKFASYELVPTDVQDKLIKDFEAKQTEE
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=728, Percent_Identity=30.9065934065934, Blast_Score=325, Evalue=7e-89, Organism=Homo sapiens, GI19923640, Length=740, Percent_Identity=24.8648648648649, Blast_Score=223, Evalue=4e-58, Organism=Homo sapiens, GI25306283, Length=386, Percent_Identity=25.9067357512953, Blast_Score=138, Evalue=2e-32, Organism=Homo sapiens, GI25306287, Length=394, Percent_Identity=24.8730964467005, Blast_Score=116, Evalue=7e-26, Organism=Homo sapiens, GI217272892, Length=553, Percent_Identity=21.1573236889693, Blast_Score=77, Evalue=6e-14, Organism=Homo sapiens, GI217272894, Length=553, Percent_Identity=21.1573236889693, Blast_Score=77, Evalue=8e-14, Organism=Escherichia coli, GI1789738, Length=719, Percent_Identity=33.7969401947149, Blast_Score=402, Evalue=1e-113, Organism=Escherichia coli, GI1790835, Length=380, Percent_Identity=22.6315789473684, Blast_Score=105, Evalue=1e-23, Organism=Escherichia coli, GI48994988, Length=174, Percent_Identity=24.1379310344828, Blast_Score=67, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17533571, Length=713, Percent_Identity=29.0322580645161, Blast_Score=315, Evalue=7e-86, Organism=Caenorhabditis elegans, GI17556745, Length=735, Percent_Identity=22.4489795918367, Blast_Score=176, Evalue=4e-44, Organism=Saccharomyces cerevisiae, GI6323098, Length=730, Percent_Identity=30, Blast_Score=315, Evalue=1e-86, Organism=Saccharomyces cerevisiae, GI6322359, Length=797, Percent_Identity=24.3412797992472, Blast_Score=228, Evalue=3e-60, Organism=Drosophila melanogaster, GI24582462, Length=721, Percent_Identity=30.374479889043, Blast_Score=333, Evalue=2e-91, Organism=Drosophila melanogaster, GI221458488, Length=748, Percent_Identity=24.1978609625668, Blast_Score=231, Evalue=1e-60, Organism=Drosophila melanogaster, GI21357743, Length=562, Percent_Identity=20.6405693950178, Blast_Score=69, Evalue=8e-12,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 80255; Mature: 80255
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVYQTNEIKNIALLGSSGSGKTTLVEAMLFESGVIKRRGSVAAKNTVSDYFPVEQEYGY CCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCHHCCCCCHHHCCHHHCCCCHHHCCH SVFSTVLHVEWNNKKLNIIDCPGSDDFVGSTVTALNVTDTAIILLNGQYGVEVGTQNHFR HEEEEEEEEEECCCEEEEEECCCCCCCCCCEEEEEEECCEEEEEEECCCCEEECCCCCEE YTEKLNKPVIFLVNQLDNEKCDYDNILEQLKEAYGSKVVPIQYPIATGPGFNALIDVLLM HHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHH KKYSWKPEGGAPVIEDIPAEEMDKAMEMHKALVEAAAENDEGLMEKFFEQDSLTEDEMRE HHCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHH GIRKGLIARGMFPVFCVCGGKDMGVRRLMEFLGNVVPFVSEMPKVENTDGKEVAPDVNGP HHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC ESLYFFKTSVEPHIGEVSYFKVMSGKVREGDDLLNADRGSKERIAQIYVVAGGNRVKVEE CEEEEEEECCCCCCCCEEEEEECCCCCCCCCHHHCCCCCCCCEEEEEEEEECCCEEEEEE LQAGDIGAAVKLKDVKTGNTLNGKDCDYKFNFIKYPNSKYSRAIKPVNEADVEKMMTILN ECCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCHHHHHHHHHHHH RMREEDPTWVIEQSKELKQTLVHGQGEFHLRTLKWRLENNEKLQVKFEEPKIPYRETITK HHHCCCCCEEECCHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEEECCCCCCHHHHHHH AARADYRHKKQSGGAGQFGEVHLIVEPYKEGMPVPDTYKFNGQEFKITVRGTEEIPLEWG HHHHHHHHHHCCCCCCCCCEEEEEEECHHCCCCCCCCEEECCCEEEEEEECCCCCCHHHC GKLVFINSIVGGSIDARFLPAIMKGIMSRLEQGPLTGSYARDVRVIVYDGKMHPVDSNEI CEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEECCCCCCCE SFMLAGRNAFSEAFKNAGPKILEPIYDVEVFVPSDRMGDVMGDLQGRRAMIMGMSSEKGF EEEEECCHHHHHHHHCCCCHHHCHHHCEEEEECCCHHHHHHHHCCCCEEEEEECCCCHHH EKLVAKVPLKEMSSYSTALSSLTGGRASFIMKFASYELVPTDVQDKLIKDFEAKQTEE HHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCEECCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MKVYQTNEIKNIALLGSSGSGKTTLVEAMLFESGVIKRRGSVAAKNTVSDYFPVEQEYGY CCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCHHCCCCCHHHCCHHHCCCCHHHCCH SVFSTVLHVEWNNKKLNIIDCPGSDDFVGSTVTALNVTDTAIILLNGQYGVEVGTQNHFR HEEEEEEEEEECCCEEEEEECCCCCCCCCCEEEEEEECCEEEEEEECCCCEEECCCCCEE YTEKLNKPVIFLVNQLDNEKCDYDNILEQLKEAYGSKVVPIQYPIATGPGFNALIDVLLM HHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHH KKYSWKPEGGAPVIEDIPAEEMDKAMEMHKALVEAAAENDEGLMEKFFEQDSLTEDEMRE HHCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHH GIRKGLIARGMFPVFCVCGGKDMGVRRLMEFLGNVVPFVSEMPKVENTDGKEVAPDVNGP HHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC ESLYFFKTSVEPHIGEVSYFKVMSGKVREGDDLLNADRGSKERIAQIYVVAGGNRVKVEE CEEEEEEECCCCCCCCEEEEEECCCCCCCCCHHHCCCCCCCCEEEEEEEEECCCEEEEEE LQAGDIGAAVKLKDVKTGNTLNGKDCDYKFNFIKYPNSKYSRAIKPVNEADVEKMMTILN ECCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCHHHHHHHHHHHH RMREEDPTWVIEQSKELKQTLVHGQGEFHLRTLKWRLENNEKLQVKFEEPKIPYRETITK HHHCCCCCEEECCHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEEECCCCCCHHHHHHH AARADYRHKKQSGGAGQFGEVHLIVEPYKEGMPVPDTYKFNGQEFKITVRGTEEIPLEWG HHHHHHHHHHCCCCCCCCCEEEEEEECHHCCCCCCCCEEECCCEEEEEEECCCCCCHHHC GKLVFINSIVGGSIDARFLPAIMKGIMSRLEQGPLTGSYARDVRVIVYDGKMHPVDSNEI CEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEECCCCCCCE SFMLAGRNAFSEAFKNAGPKILEPIYDVEVFVPSDRMGDVMGDLQGRRAMIMGMSSEKGF EEEEECCHHHHHHHHCCCCHHHCHHHCEEEEECCCHHHHHHHHCCCCEEEEEECCCCHHH EKLVAKVPLKEMSSYSTALSSLTGGRASFIMKFASYELVPTDVQDKLIKDFEAKQTEE HHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCEECCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA