| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347546
Identifier: 29347546
GI number: 29347546
Start: 2688931
End: 2690289
Strand: Reverse
Name: 29347546
Synonym: BT_2136
Alternate gene names: NA
Gene position: 2690289-2688931 (Counterclockwise)
Preceding gene: 29347547
Following gene: 29347544
Centisome position: 42.97
GC content: 46.06
Gene sequence:
>1359_bases ATGAAGATTACGAAGAAGAAAATAGCTTGGGGCATCGTTCTCCTGATATTGATTGCCGGTGGTGTCATTTGTAAGATACG CTGGAAAGTCTGGTTCCACAATATCCCTGAAATACGCTATGTGCTGACGGAAGACCCGCAACGGGTATTTCTGACATTCG GAAATGACGGCGAACTGTCCCGTAATGTGAGCTGGGTGTGCGGAGGCGTTTCCAAGCAGGCAAAGCTGGAATATACAAAG ATCGGTTCCGGAGATACTCTTCTCGTTGACGGCTCTTCCAAATTTCTCCGTACACTGGGCGGGTTCGGTTATGCCAACTG GGCAAAATTTAAAGAACTCTCTTATGGCGATTCCTACTCTTATCGGGTATGGAATGACGATCGCTCATCCGATTGGTATT CGTTCACGATGCAACCCGATTCGACTGATCATTTCTCCTTTGTATTTATAGGTGACGTGCAGGATACTTTGCGTGGAAAG ACACGTGGCTTTATGGAAAATGTGCGCCATCGCTATCCGCAGGCGGACTTCTATATGTTTGCCGGTGACTTTGCAGAGCG TCCGATGAACTGTTACTGGGATGAAGCCTATCAGAGCGTGGATTCCATAGCTCCCACCAAACCGATATTGGTTTCTCCGG GAAATCATGAATATGTAAAAGGACTGGTACGTGTTTTGGAGAAACGATTTGCTTATGTCTTTTCTTATCTGCTCGAATCG AGGTATAAGAATAATAATGTATATTCTATTGATTACAACGATGCCACTATCATCACGCTGGATAGTAACCGTGATCCTTG GTTCCTCTTCTCTCAACGGGAATGGCTGGAGAAAACGCTGAAGGCTTCGAAAAAGAAATGGAAGATCGTCATGCTCCATC ATCCTGTATATTCTATAAAAGGTAAAACGAACAACCTTGCCGTACGCTGGATGTTCGACGGACTGTTCCGTGAATATGGA GTAGACTTGGTGCTTCAGGGACATGAGCATAACTATGCCCGTATGACTAATAAGAACGATGAGGGCGAAATGACCACCCC GTTGTATCTGGTAAGCCACGCTTCCCCGAAGAGTTACCGTCTATCTTTCAATGATAAGTATGATCGTTTCGGGACGGACC GCCGTTTCTACCAGCATATCGACGTGACGGGAGACACGCTCCGGATGCAAGCTTATCTGGAGAATGACTCACTGTACGAT GATGTCCGTATTGTGAAGAACGCTTCCGGCACTCAAATCATTGACAATGCAAAAGACATTCCGGAGATACTTGAAATGCC TGCAAGGTTGAGTGGAAAGAAAGCCGAAGAGTTCGAACGGAATGCTGAGAAGTGGAGGAACCGTTCCTTAGTAAAGTAA
Upstream 100 bases:
>100_bases CTCATGTAGAGGTGAATTTGTTAAAGGTTAAAAAAGGACATAATTTCCGATTTATGGGACACTATATTTATCTTTGCTAC CAGTTTTTAAAATCGGAAAA
Downstream 100 bases:
>100_bases ATACTTCTGTCTCATATCACGGTAGGTCTGCAACTCCTTTTGCCAGCTGTCACGGATTTCCTCTTCCGATTCTCCTTTAA GGATCGCTTTGCGTACCGAA
Product: putative purple acid phosphatase
Products: NA
Alternate protein names: Phosphoesterase; Ser/Thr Protein Phosphatase Family Protein; Purple Acid Phosphatase; Calcineurin-Like Phosphoesterase; Phosphatase; PA14 Domain Protein; Metallophosphoesterase/Pkd Domain Protein; Alpha-1 2-Mannosidase Family Protein; N-Acetylmuramoyl-L-Alanine Amidase; Phosphohydrolase; Ser/Thr Phosphatase Family Protein; Collagen Triple Helix Repeat Protein; Metallophosphoesterase Domain-Containing Protein; Icc Family Phosphohydrolase; Ser/Thr Protein Phosphatase Family Protein Family
Number of amino acids: Translated: 452; Mature: 452
Protein sequence:
>452_residues MKITKKKIAWGIVLLILIAGGVICKIRWKVWFHNIPEIRYVLTEDPQRVFLTFGNDGELSRNVSWVCGGVSKQAKLEYTK IGSGDTLLVDGSSKFLRTLGGFGYANWAKFKELSYGDSYSYRVWNDDRSSDWYSFTMQPDSTDHFSFVFIGDVQDTLRGK TRGFMENVRHRYPQADFYMFAGDFAERPMNCYWDEAYQSVDSIAPTKPILVSPGNHEYVKGLVRVLEKRFAYVFSYLLES RYKNNNVYSIDYNDATIITLDSNRDPWFLFSQREWLEKTLKASKKKWKIVMLHHPVYSIKGKTNNLAVRWMFDGLFREYG VDLVLQGHEHNYARMTNKNDEGEMTTPLYLVSHASPKSYRLSFNDKYDRFGTDRRFYQHIDVTGDTLRMQAYLENDSLYD DVRIVKNASGTQIIDNAKDIPEILEMPARLSGKKAEEFERNAEKWRNRSLVK
Sequences:
>Translated_452_residues MKITKKKIAWGIVLLILIAGGVICKIRWKVWFHNIPEIRYVLTEDPQRVFLTFGNDGELSRNVSWVCGGVSKQAKLEYTK IGSGDTLLVDGSSKFLRTLGGFGYANWAKFKELSYGDSYSYRVWNDDRSSDWYSFTMQPDSTDHFSFVFIGDVQDTLRGK TRGFMENVRHRYPQADFYMFAGDFAERPMNCYWDEAYQSVDSIAPTKPILVSPGNHEYVKGLVRVLEKRFAYVFSYLLES RYKNNNVYSIDYNDATIITLDSNRDPWFLFSQREWLEKTLKASKKKWKIVMLHHPVYSIKGKTNNLAVRWMFDGLFREYG VDLVLQGHEHNYARMTNKNDEGEMTTPLYLVSHASPKSYRLSFNDKYDRFGTDRRFYQHIDVTGDTLRMQAYLENDSLYD DVRIVKNASGTQIIDNAKDIPEILEMPARLSGKKAEEFERNAEKWRNRSLVK >Mature_452_residues MKITKKKIAWGIVLLILIAGGVICKIRWKVWFHNIPEIRYVLTEDPQRVFLTFGNDGELSRNVSWVCGGVSKQAKLEYTK IGSGDTLLVDGSSKFLRTLGGFGYANWAKFKELSYGDSYSYRVWNDDRSSDWYSFTMQPDSTDHFSFVFIGDVQDTLRGK TRGFMENVRHRYPQADFYMFAGDFAERPMNCYWDEAYQSVDSIAPTKPILVSPGNHEYVKGLVRVLEKRFAYVFSYLLES RYKNNNVYSIDYNDATIITLDSNRDPWFLFSQREWLEKTLKASKKKWKIVMLHHPVYSIKGKTNNLAVRWMFDGLFREYG VDLVLQGHEHNYARMTNKNDEGEMTTPLYLVSHASPKSYRLSFNDKYDRFGTDRRFYQHIDVTGDTLRMQAYLENDSLYD DVRIVKNASGTQIIDNAKDIPEILEMPARLSGKKAEEFERNAEKWRNRSLVK
Specific function: Unknown
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI32566472, Length=323, Percent_Identity=26.0061919504644, Blast_Score=76, Evalue=3e-14, Organism=Caenorhabditis elegans, GI133931204, Length=256, Percent_Identity=26.953125, Blast_Score=76, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17544356, Length=338, Percent_Identity=25.1479289940828, Blast_Score=76, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52778; Mature: 52778
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITKKKIAWGIVLLILIAGGVICKIRWKVWFHNIPEIRYVLTEDPQRVFLTFGNDGELS CCCCHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCEEEEEECCCEEEEEEECCCCCCC RNVSWVCGGVSKQAKLEYTKIGSGDTLLVDGSSKFLRTLGGFGYANWAKFKELSYGDSYS CCCEEEECCCCCCCEEEEEEECCCCEEEEECCHHHHHHHCCCCCCCHHHHHHCCCCCCEE YRVWNDDRSSDWYSFTMQPDSTDHFSFVFIGDVQDTLRGKTRGFMENVRHRYPQADFYMF EEEECCCCCCCEEEEEECCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEE AGDFAERPMNCYWDEAYQSVDSIAPTKPILVSPGNHEYVKGLVRVLEKRFAYVFSYLLES ECHHHCCCCCCHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH RYKNNNVYSIDYNDATIITLDSNRDPWFLFSQREWLEKTLKASKKKWKIVMLHHPVYSIK HCCCCCEEEEECCCEEEEEEECCCCCEEEECCHHHHHHHHHCCCCCEEEEEEECCEEEEC GKTNNLAVRWMFDGLFREYGVDLVLQGHEHNYARMTNKNDEGEMTTPLYLVSHASPKSYR CCCCCEEEEEHHHHHHHHCCCEEEEECCCCCEEECCCCCCCCCEECCEEEEECCCCCEEE LSFNDKYDRFGTDRRFYQHIDVTGDTLRMQAYLENDSLYDDVRIVKNASGTQIIDNAKDI EEECCCHHHCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCHHEEECCCCCEECCCCCCC PEILEMPARLSGKKAEEFERNAEKWRNRSLVK HHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKITKKKIAWGIVLLILIAGGVICKIRWKVWFHNIPEIRYVLTEDPQRVFLTFGNDGELS CCCCHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCEEEEEECCCEEEEEEECCCCCCC RNVSWVCGGVSKQAKLEYTKIGSGDTLLVDGSSKFLRTLGGFGYANWAKFKELSYGDSYS CCCEEEECCCCCCCEEEEEEECCCCEEEEECCHHHHHHHCCCCCCCHHHHHHCCCCCCEE YRVWNDDRSSDWYSFTMQPDSTDHFSFVFIGDVQDTLRGKTRGFMENVRHRYPQADFYMF EEEECCCCCCCEEEEEECCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEE AGDFAERPMNCYWDEAYQSVDSIAPTKPILVSPGNHEYVKGLVRVLEKRFAYVFSYLLES ECHHHCCCCCCHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH RYKNNNVYSIDYNDATIITLDSNRDPWFLFSQREWLEKTLKASKKKWKIVMLHHPVYSIK HCCCCCEEEEECCCEEEEEEECCCCCEEEECCHHHHHHHHHCCCCCEEEEEEECCEEEEC GKTNNLAVRWMFDGLFREYGVDLVLQGHEHNYARMTNKNDEGEMTTPLYLVSHASPKSYR CCCCCEEEEEHHHHHHHHCCCEEEEECCCCCEEECCCCCCCCCEECCEEEEECCCCCEEE LSFNDKYDRFGTDRRFYQHIDVTGDTLRMQAYLENDSLYDDVRIVKNASGTQIIDNAKDI EEECCCHHHCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCHHEEECCCCCEECCCCCCC PEILEMPARLSGKKAEEFERNAEKWRNRSLVK HHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA